Astyanax mexicanus (Mexican tetra): 103036003
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Entry
103036003 CDS
T05042
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103036003 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103036003 (polr1b)
Enzymes [BR:
amex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103036003 (polr1b)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
103036003 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
103036003
NCBI-ProteinID:
XP_007258755
Ensembl:
ENSAMXG00000037818
UniProt:
A0A3B1JC76
A0A8T2LX95
LinkDB
All DBs
Position
7:41435360..41446172
Genome browser
AA seq
1133 aa
AA seq
DB search
MDYSTKWSSLPAAPSLKPLTQPGYGLPKEQQQAAVQDLVKAHIDSFDQALSDGLAQVVQA
IPPMEFMHKGDRISLAFVEATVHNPTVAKGGICKDLRVFPAECRGRRCTYRGKLVADVSW
SVNGVPKGIIKQSLGQVPIMVKSKLCNLHGLSPKELIEHHEEAEEMGGYFIVNGIEKVIR
MLIMPRRNFPIALSRPKFKSRGQGYTQYGIAVHCVKDEHTAINMNLHYLDNGTIMLNFIY
HKELFFLPLGFALKALVDFSDYQIYQELIKGKEENSFYKSCVSEMLRLVMEEGCTTRAKV
LNYLGERFRVKLHLPEWYTNEQCAKFLLDECLCIHLKSDSEKFYNLCLMTRKLFAFAKQE
CQEENPDSLMCQEVLTPGQLFLMFLKEKMTGWLVSVKLALDKRSQRVAGITAENLTRIFN
LGTDITRAFEYMLATGNIISKTGLGMLQDSGLCVVADKLNFIRYLSHFRCVHRGAAFAKM
RTTTVRKLLPESWGFLCPVHTPDGTPCGLMNHMTTHCEIVAPTSSTSTLPALLCSLGVTP
VESTPSQPYSCCYPVVLDGAMIGWVEKDLAPSLVESLRRFKVLKEKRMPPWTEIVLVPQT
GKASLYPGLFLFTTPCRMMRPVRNLALGKQELIGTFEQLYLNVGIFEDEIEEGVTTHQEL
FPHSMLSVVASFIPFSDHNQSPRNMYQCQMGKQTMGFPLHSYQDRSDNKLYRLQTPQSPL
VRPVMYDHYNIDNYPIGTNAVVAVISYTGYDMEDAMIVNKSSWERGFAHGSVYKTEVIDL
SEKAKGEDSVVFGTKPGDPKVGTKLDVDGLPAIGTVLNYGDPYYSYVNLNTGQSHVSFYK
SQETCVVDNIKVCSNDTGTGRFKRVCITMRIPRNPTIGDKFASRHGQKGILSRLWPAEDM
PFTESGMTPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFTFSEENSALEHF
GDMLKAAGYNYYGTERLYSGLSGMELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVT
NQPVGGRNVQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCMDCGSLLSPLLE
KPPPHWSTTRHRNTICMLCKKSDSIENVSVPYVFRYFVAELAAMNIKIKLDVK
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggactacagcacgaagtggagcagtttacccgctgcgcccagcctcaaacctctcaca
cagcccggctacgggctcccgaaggagcagcagcaggcggccgtgcaggatctggtcaaa
gcgcacatcgactccttcgaccaggcgctcagtgatggactggcccaagtggttcaggca
attcctcctatggagttcatgcacaagggggacaggatcagcctggcgtttgtggaggcc
accgtgcacaatcctactgtagccaaaggagggatctgtaaggatcttcgtgtctttcct
gcagaatgtagaggaaggaggtgtacatacagaggcaaactggtggcagacgtcagctgg
tcagtgaatggagtccctaaaggaattataaagcagtctttgggccaggtgcccatcatg
gtgaagtctaagctatgcaacctccatggcctctccccaaaagagcttatcgagcatcat
gaagaggcagaggaaatgggaggctattttatagtgaatggtattgagaaagtaatccga
atgctcatcatgccaaggagaaactttcccattgctttgtcaagacccaagtttaaaagc
agagggcagggatacacgcaatacggtattgcagtgcactgtgtgaaggatgagcacaca
gccattaacatgaaccttcactacctggacaatggaacgatcatgcttaacttcatttat
cacaaagagctcttcttccttccgcttggttttgctcttaaggccctggtggacttttca
gactaccagatctatcaggagttgataaaaggcaaagaggagaactccttctataagagc
tgtgtgtctgagatgctgcgcttggtgatggaagagggctgcaccacccgagcgaaggtg
ctgaactatctgggcgagcgtttccgggtcaaactccacttgccagagtggtacacgaac
gagcagtgtgctaaattccttctagacgagtgtctgtgtattcacctgaagtcagacagt
gagaagttctacaatctttgtctaatgacgcggaagctgtttgcctttgcaaagcaggag
tgtcaggaggagaacccggacagtctgatgtgtcaggaggttcttacacctggacagctc
ttcctcatgttcctgaaggaaaaaatgactggctggctggtgtctgtgaagcttgcttta
gataaaaggagccaaagagttgcaggaatcactgcagaaaacctgaccaggatcttcaac
ctgggcacagacatcaccagagcctttgagtacatgctggctacaggcaatatcatttcc
aagacaggtttgggaatgcttcaggacagtggtctgtgtgtggtggctgacaagctgaat
ttcattcgctatttgtctcacttccgctgtgtgcacagaggagcagccttcgctaagatg
agaactacaacagtgcgaaagctgctaccggagtcctggggcttcctctgccctgtgcac
actcctgatggaacgccatgcggcttgatgaaccatatgaccacccactgtgagattgtg
gccccaacttcctccaccagcactctgcctgccctgctctgctctctgggtgtgactcca
gtggagagcactcccagtcagccctactcctgctgctatcctgtggtactggatggggcc
atgatcggctgggtggagaaagatcttgcaccctctctggttgagtctctgcgcaggttc
aaggttctgaaggagaagaggatgcctccgtggactgagatcgttctggttccacagacg
ggtaaagccagcttgtacccaggcctcttcctcttcaccacaccgtgtcgcatgatgcgg
cctgtccgcaatctcgctctgggcaaacaggaactgattggaacttttgaacagctgtac
cttaacgtagggatatttgaagatgagattgaggaaggtgtgaccacacaccaggagctc
ttccctcacagcatgctgagtgtggtggccagctttatccccttctccgaccataaccag
agtcccaggaacatgtaccagtgccagatgggtaaacagactatgggttttcctctgcac
tcctaccaggaccgctctgataataagctgtatcgtctacagacccctcagagtcctctg
gttcggccggtgatgtatgaccactataacattgacaactaccccattggcaccaatgct
gtagtggcagtgatctcgtatacaggctatgatatggaggatgccatgattgtgaacaag
tcatcttgggagcgtggctttgcccatggctctgtctataagactgaggtaattgaccta
tcagagaaggccaaaggtgaggacagcgtggtgtttggaactaaaccgggtgaccctaaa
gtgggaaccaagctggacgtagacggactccctgctataggaacagtgctgaattatgga
gacccgtattacagctatgtcaacctcaacacaggccagagccacgtcagcttctacaag
agtcaggagacctgtgtggtggacaacatcaaagtgtgcagtaatgatacaggcacaggt
cgcttcaagcgagtttgcattacaatgcgaatcccgcgtaaccccacgatcggagacaag
tttgccagcaggcacggtcagaagggcattctgagccgcctgtggccggcagaggacatg
ccgtttactgagagcggcatgacccccgatatcctcttcaacccacacggcttcccttct
cgtatgaccatcggtatgctgatcgagagcatggcagggaaatcggcagccctccacggc
ttgtgccatgatgccacgcccttcacgttctcggaggagaactccgccctggagcatttt
ggtgatatgctcaaagcggcgggctataattactatggcacagagcggctctactctggt
ctcagtggcatggagctggaggcggacatcttcatcggcgtggtttactaccagcggctg
cgtcacatggtctctgacaagttccaggtgagaaccactggagcgagggacaaagtgacc
aatcagccggtgggagggaggaacgtgcagggtggaatccgttttggagagatggagcga
gacgctctgctggcccacggctcctccttcctgctacatgaccggctattcaactgctcg
gaccgctccgtggctcaggtgtgcatggactgtggcagtctgctgtcccccttgctggag
aagccgccgcctcattggtcaaccacacggcatcgcaataccatctgcatgctgtgcaag
aagagtgactctatagagaatgtgtcggttccgtacgtattccgctactttgtggctgaa
ctggcagcaatgaacatcaagatcaagctagatgtgaagtga
DBGET
integrated database retrieval system
