Astyanax mexicanus (Mexican tetra): 103036028
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Entry
103036028 CDS
T05042
Name
(RefSeq) transcription factor Sox-19a
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103036028
Transcription factors [BR:
amex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
103036028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
103036028
NCBI-ProteinID:
XP_007242039
Ensembl:
ENSAMXG00000039656
UniProt:
A0A8B9HBY9
A0A3B1IL14
LinkDB
All DBs
Position
1:686849..689715
Genome browser
AA seq
309 aa
AA seq
DB search
MYSMMEHEVSMKGPMSVQQPQGPQVQQQQPGQGVLMVPGPGGTHGGVSKGALHSQHKVAP
DPLDKVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAK
RLRALHMKEHPDYKYKPRRKSKPALKRDNPAAKYPLSGAGLVPMQGTGGSPRMDGYGWGP
AGGYATVQPDALGYGQQLHRYELQGLQYPGTMATAQGYMNGGNAYSSMSYGSSSQQSVVS
MVKPDAVSPPPTAGSAPQRSTLHTDLRDMISMYIPSPGDTHTADTHSQRGYAANIQQHYL
AGTTPLTHI
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggagcacgaggtctccatgaagggtccgatgtcggtccagcagccg
caggggccgcaggtgcagcagcagcagcccgggcagggcgtcctgatggtcccaggaccc
gggggaacccacggcggggtcagtaaaggggctctgcacagtcagcacaaggtcgccccc
gaccccctggataaggtcaagaggcccatgaatgccttcatggtgtggtcccgcggtcag
cgccggaagatggcccaggagaacccgaagatgcacaactcagagatcagcaagcgactt
ggcgccgagtggaagctgctgaccgatgccgagaagcgtcccttcatcgacgaggccaag
cgtctgcgggcgctgcacatgaaggagcacccggactacaagtacaaaccccgccgcaag
agcaagcccgccctgaagagggacaacccggcggccaagtaccccctgagcggggcaggg
ctggtgcccatgcaggggaccgggggcagcccgcggatggacggttacggctggggtccc
gccggcgggtacgccaccgtgcagccggacgccctggggtacggccagcagcttcaccgc
tacgagctgcagggcctgcagtaccccggcaccatggcgaccgcccagggatacatgaac
ggagggaacgcctatagctccatgtcttatggctcctcctcccagcagtctgtggtatcc
atggtgaaacccgacgcagtgtctccgcccccaacggcaggctccgccccccagcgtagc
acgttacacaccgacctgcgggacatgatcagcatgtacatccccagccccggcgacaca
cacaccgccgacacacactcgcagcggggctacgccgctaacatccagcagcattacctc
gccgggaccacgcccctaactcacatctga
DBGET
integrated database retrieval system
