Astyanax mexicanus (Mexican tetra): 103036067
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Entry
103036067 CDS
T05042
Symbol
vps54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
amex01009
]
103036067 (vps54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103036067 (vps54)
Protein phosphatases and associated proteins [BR:
amex01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103036067 (vps54)
Membrane trafficking [BR:
amex04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
103036067 (vps54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
YqzH
FeoB_Cyto
Motif
Other DBs
NCBI-GeneID:
103036067
NCBI-ProteinID:
XP_022530210
Ensembl:
ENSAMXG00000011759
LinkDB
All DBs
Position
21:complement(35591148..35616756)
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AA seq
1007 aa
AA seq
DB search
MASGPGTTPVAQASAGSSGPDGFFRKPREAAGSSRHYRPPRSLPDVCPKEPTGEARGLCE
GPSVVADQHRWTVYNSKVNLPAALNDPRLAKRESDFFTKNWGLDFTETEVMPSFYLPNIT
AEHFSEYLQETAQREKIHERCKNICPNKDDLSVPNITNNHDKAKEELEQVPKIFMRPDFV
LNDPATFNTVLPWSHFSVAGGKNSRDGASSRLLQEKLSHYLDVVEVSIARQISLRSEAFF
HAMSSQHELQDRLRETAVAVATLRARTAVMDRVMCRGPLQALKDTVTRSNCAKLHGKLKL
MAAVQQTQPTVQLLLSTSEFVGALELIATTKEVLQQELQGIHSFRHLGSQLCEMEKLIDK
MIVADFTTYSRSDLNRSFEDDSQVLEKVPNHKPANEKDRLQSLVFGLLRQRKLDFLDIYS
EEMMQAAKGIVRQCVLRSVSQIEDIDTDTVVKLQDQMRLMKFSQWFELLQNVFEHFVLFL
TRIKATLSVIRNVVLEVLDSCQRSRMADSSSAIADGNCGENEDEDEEHSGGSSLRPGEAE
LAYLTHEGLFISDALNEAERRSSTAAPSKTQTQTRAETSGSDSASGTTESSSSREQTTNT
TSSLPTGGTTSIEDLMPSDLELGRVANNIQELLYTASDISHDRCVKVLLAKAKDCSLERL
SSAEFVCVSRAVEGFVKETEALCSRRSVSLRGALQSQANRFVHRFHEERKTKLSLLLDNE
RWKQAEVPAEFQHLVDSIADGHITLPERKPAGTEDKKPSDFLLVDGQKYAVVGTVLLLIR
IFLEYCQCVNDIPSITTDMLTRLADLLKHFNSRSCQLVLGAGALQVVGLKTITTKNLALV
SRCLQLVVHYIPIIRAHFETKLQPKQYSILRHFDHITKDYNDHIAEISAKLVAIMDGLFE
RVLSKYEVKAPMPSLCFRNVCKQMAKMHEAIHDLLPEEQTQMLFLRINTSFKMHLKRQLS
RLGVINDGGPQQGLVVVDVAFYTENVQALRSLERLDLNMPEIWEQKR
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctggaccgggcacgacgccggtggcccaggccagcgcgggcagcagcggccct
gatggattcttccggaagcccagagaggcggccggttcctccagacactacagaccccct
cgctctctccctgacgtctgtcccaaggagcccaccggggaagcccgggggctgtgtgag
ggtccgtcggtggtggcggatcagcaccggtggacggtgtataactctaaagtgaacctg
ccggccgccctaaacgacccgcgcctcgccaaacgcgagtctgacttcttcaccaagaac
tgggggctggacttcaccgagaccgaggtgatgccttcattctacctgcccaacataacg
gccgaacacttcagcgagtacctgcaggagaccgctcagagggagaaaatccacgagagg
tgtaagaacatttgtcccaataaagacgatctgtccgtgcccaacatcacaaacaaccac
gataaagccaaagaagagcttgagcaggtgcctaagatcttcatgaggccggacttcgtg
ctgaacgaccccgccacattcaacactgtgttaccgtggtctcacttcagcgttgccggg
gggaagaacagtcgagatggtgcgtcgtcacggttactgcaggaaaagttgagtcactat
ctggatgtggtggaggtcagcatcgcccggcagatctctctgcgctccgaggcgtttttc
cacgccatgtcctcccagcacgagctgcaggaccggctgcgggagacggcggtcgccgtg
gcgacgctgagggcccggacggcggtgatggaccgggtgatgtgccgggggccgctccag
gctctgaaggacacggtgacccgcagtaactgtgccaagctgcacggaaagctgaagctg
atggcggctgtgcagcagacgcagcccaccgtgcagttactgctctccacctccgagttc
gtgggggcgctagagctcatcgccaccaccaaggaggtgctgcagcaggagctacagggc
atacacagcttcaggcacctgggctctcagctgtgtgagatggagaagctgattgataaa
atgattgtggctgattttactacctattccagaagtgacctcaaccgctcctttgaggac
gacagccaagtgttggaaaaggttccaaaccacaaaccggcgaatgagaaggaccgtctc
cagtctctggtgtttggtttactgaggcagaggaagctggatttcctggatatttacagt
gaggagatgatgcaggcagctaaaggcatcgtcaggcagtgtgtgttgagatccgtgtct
cagattgaggacatcgacacagacactgtggtaaagctgcaggatcagatgaggttgatg
aagttctctcagtggtttgagttgctgcagaacgtcttcgagcattttgttctcttcctc
accagaatcaaggccactctcagcgtgatccgtaacgtagttctggaagtgctggacagt
tgtcagaggagccgcatggccgactcttcttctgcgattgccgacgggaactgtggtgag
aatgaagacgaggatgaggagcattccggaggctcgagtcttcgtcccggagaggcggag
cttgcgtatctcacacacgaggggctgttcatcagcgatgcattaaatgaagcagagcgg
cgcagcagcacagccgcaccgtcaaaaacgcaaacgcaaacccgagcggagacgtccggg
agcgactcggcctcgggaaccacagagtcttcatccagcagagagcagaccactaacact
acctcctccctgcccacagggggcaccacctccattgaggatctgatgccgtctgatctg
gaactgggccgagtggccaacaacatccaggagctcctctacaccgcctccgacatcagc
cacgaccgctgtgttaaagtcctgctggctaaagccaaggactgttctctggagcgtctg
agctcggcggagtttgtgtgtgtgagccgggcggtggagggcttcgtgaaggagacggag
gctctgtgcagcagacgcagcgtcagcctgaggggggcgctgcagagccaggccaaccgc
ttcgtccaccgcttccacgaggagcgcaaaaccaagctcagtctgctgctggacaatgag
agatggaagcaggctgaggttccggctgagtttcagcacctggtcgactccatcgcagac
ggacacatcacactgcctgaacgcaaacctgcaggaacggaagacaagaagcccagtgac
ttcctgctggttgacgggcagaagtatgcggttgtcgggacggtgctgctgctgatccgg
atctttctggaatactgccagtgtgtgaacgacatcccgtccatcaccactgacatgctc
acacgcctcgcagatctactcaagcacttcaactcgcggagctgtcagctggttcttggg
gccggagctctgcaggtggtggggctcaaaaccatcaccaccaagaacctggctctcgtg
tctcgctgtctgcagctggttgttcactacatccccatcattagagcacacttcgagacc
aaactgcagcccaaacagtacagcatcctgcgccactttgaccacatcaccaaggactat
aacgaccacattgctgagatctcagctaaactcgtggccattatggacggcctgtttgaa
agagtgctatcaaagtatgaagtgaaagccccgatgccgtcgctgtgttttcgtaatgtc
tgcaagcaaatggccaaaatgcacgaggccatccacgatctcctacctgaggagcagaca
cagatgttgtttctgcggatcaacacaagctttaagatgcacctgaagaggcagctctct
cgactgggggtcataaacgatggtggtcctcagcaagggctggtggtggttgacgtggcc
ttctacacagagaacgttcaggcgctgcgctcgctggagcgtttggacttaaacatgcca
gagatctgggagcagaagaggtga
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integrated database retrieval system
