Astyanax mexicanus (Mexican tetra): 103036100
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Entry
103036100 CDS
T05042
Symbol
pals1b
Name
(RefSeq) MAGUK p55 subfamily member 5b isoform X1
KO
K06091
MAGUK p55 subfamily member 5
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
103036100 (pals1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amex04990
]
103036100 (pals1b)
Domain-containing proteins not elsewhere classified [BR:
amex04990
]
PDZ domain-containing proteins
MAGUK family proteins
103036100 (pals1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
PDZ_6
L27
SH3_1
PDZ_2
ZNHIT3_C
crAss_CARG1
SH3_9
DUF945
CbiC
Motif
Other DBs
NCBI-GeneID:
103036100
NCBI-ProteinID:
XP_022540120
Ensembl:
ENSAMXG00000018802
LinkDB
All DBs
Position
1:85751469..85778354
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AA seq
658 aa
AA seq
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MIAAHMNGYVESFELIDSSEKSRQVKDMAVECPGDPEPQSRYSNKMERIQNYQEELRKKR
EEEGRYRNLNTNLNASSQKLNKLSQSPKMGVDNLTFERPETPRQGTLDLEAPPTELNDLL
QSLQRVRYSLGDAESQADVQVVMELLQQREFQQAFSMHSTVALGVRAVNPPYPVTPRAQH
LCHEVQNVLQFTKQKEGIELKALLTNPHLQALMEAHDCVAERELEPEFSLAQYGGETVKL
VRLEKARDIPLGATVRNEHDCVMVSRVVKGGAADRSGLLIEGDEILEINGIPVRGKNINE
VHDILSDMHGPLTFLLIPSSRHKAPAHRQTVMHVRANFSYDPADDPYLPCRELGLAFQKG
DILHVLSQDDPNWWQAYKDGDDDNQRLAGLIPGKSFQQQRETLKKTTTERNPDNPGKLWY
TKKIKKPRKKSFYNPSRNVESYTEDVLTYEEMTLYHQAGNRKRPIALIGPAHSGHDDLRQ
RLLSVEPGRFAGAVPHTTRSPRAHELNGREYHFVSRSNFEADVAAGKFIEYGEYERNLYG
TSVDSVRQVANAGRICLLSLHTRSLRVLRSSNLKPYVIFIAPPPPDQLRTLLSKEGKNLQ
SEDLKEVTQKAREMEQNYGHLFDAVVVNSDEDMAFFELLRLIEKLDTQPQWVPSSWLC
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgattgctgcacacatgaatggatatgtggagagttttgaactaatagacagttcagaa
aaatcccgccaggtcaaagacatggctgtggagtgtcccggcgatcccgaaccccagtcc
cgctacagcaacaaaatggagaggatacaaaactaccaggaggagctgaggaagaagagg
gaggaggaaggacgctatcgaaatcttaacaccaacctgaacgcctcctcacaaaaactc
aataaactgtcacaaagccccaagatgggcgttgacaacctcacattcgaaagacctgag
actccaaggcaaggcacactggatctggaggcaccaccaacagagctgaatgacctgctc
cagtctctgcagcgtgtgcggtacagtctgggtgatgctgagagtcaggcagatgttcag
gtggtcatggagctgcttcagcagcgtgaattccaacaggccttcagcatgcacagcact
gtggcactcggcgtcagagctgtcaacccaccgtatcccgtcaccccccgcgcccagcac
ctctgccacgaggtgcagaatgtcttacagttcaccaagcagaaagaggggattgagctt
aaagccctgttgaccaacccgcaccttcaggctctgatggaggcccatgactgtgtggct
gagcgagagctggagccagagttcagtttggcccagtatggaggagaaacagtaaaactg
gttcgtctggagaaggcccgggacataccacttggtgcgacggtgaggaatgagcatgac
tgtgtaatggtgagtcgggtggtaaaaggtggagcggcggatagaagtgggctcctcatt
gagggagatgaaatcttggaaataaatggcatcccagtccgtggcaaaaacatcaacgaa
gtccacgacattctgtccgacatgcatggcccccttacattccttctgatccccagctca
cggcacaaagctcctgcacacaggcagaccgtgatgcatgtgagagcgaacttcagttat
gatcctgcggatgacccgtacctgccctgccgagagctgggtctggccttccagaaaggc
gacatcctgcacgtcctcagccaagacgaccccaactggtggcaggcctacaaagatgga
gacgatgacaatcagagactggctggactcatacctgggaagagttttcagcagcagaga
gaaactctgaagaaaacaaccacagagcgaaatccagataatcctggaaaactttggtat
acaaagaagatcaagaagccaagaaaaaagagcttttacaaccccagcaggaatgttgaa
agctacacagaggatgttctgacctatgaggagatgactctgtaccatcaggcaggcaat
cgtaagcggcccatagccctgattggtccagcgcacagcggccatgatgacctgaggcag
aggctgctgtccgtagagccggggcgatttgcaggcgctgttccccacaccactcggagt
ccccgagcacatgagctgaatgggagggagtaccattttgtgtcacggtcgaactttgag
gctgatgtggcagcgggtaaatttatagagtatggagagtatgagcgcaacctttacggc
accagtgtggactcagtgcggcaggtggcgaacgcaggacgtatctgcctactttctctc
cacacacggtctctgcgtgtcttgcgttcctctaatctcaaaccatatgtcatcttcatc
gctcctcctccaccagaccaactgcgcaccctgctgtccaaagaagggaagaacctgcag
tctgaggatttgaaggaggtgacacaaaaggcccgagagatggagcagaactacggccac
ctgtttgatgctgttgtggtgaatagtgatgaggatatggccttctttgagcttctgcgg
ctcatcgagaaactggacacacagccacagtgggtcccatcctcctggctttgctaa
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