Astyanax mexicanus (Mexican tetra): 103036146
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Entry
103036146 CDS
T05042
Symbol
nhej1
Name
(RefSeq) non-homologous end-joining factor 1
KO
K10980
non-homologous end-joining factor 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
103036146 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amex03400
]
103036146 (nhej1)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
103036146 (nhej1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
Motif
Other DBs
NCBI-GeneID:
103036146
NCBI-ProteinID:
XP_007244249
Ensembl:
ENSAMXG00000013157
UniProt:
A0A8T2M3V4
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All DBs
Position
5:complement(55439535..55449375)
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AA seq
321 aa
AA seq
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MESMNHPELAVSALPWVPVTVGDMKLLAKAFFGDTEYRLLLSDLSNMWEEEMSKDSIQSR
AQDLNKRLKAPVEAFFAHLRSVAAPCLSGQSHDQSTTAHFHLEHYGSHLTLKLKSELAGV
PFYWEFRCTPAPVAVVSRQMMRPLLAVTRVLQKQVEELSALLVRKDAEIQDYKENGAVLS
RGRLQTEPFDEETYRENFITQTLPQMGALQDCLEFDSELQELYVAVNSVRSNQKRKRSVS
PSADNFSFVPEQISPNHDQGSAPAGLRPPVSSGSKQKNDQQSLEKTQEADSEQTVPLLPA
AAPVDRSSVRPKKKKAVGLFR
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggagagtatgaatcaccctgaattagctgtttcagcattgccatgggtgccagtgact
gtgggggatatgaaactgctggccaaagctttttttggtgatactgagtatcgactgctt
ttgagtgacttgtccaatatgtgggaggaagagatgagcaaggacagcatccagagtcga
gcacaggatctaaataagcgtctgaaggctccagtagaggcgttctttgctcacctgcgc
tcagtggccgcaccgtgtctctctggacagtcacatgaccagagcacaacagcacacttc
cacctcgaacattatggcagccacctaactctcaaactgaaaagtgagctagcaggagtc
ccattctactgggagttccgctgcacccctgctcctgtagctgtggtgtccaggcagatg
atgcgccctctgttggctgtgactcgtgtactgcagaagcaggttgaggagctgtctgct
ctgcttgtgaggaaagatgctgagatacaagattataaggagaatggagccgtgctcagt
agaggcagacttcagaccgagccttttgatgaggaaacatatcgagaaaactttatcacc
cagactcttcctcagatgggtgcgcttcaggactgcctggaatttgactctgagttgcaa
gagctgtatgtggctgtgaacagtgtaagaagcaaccagaagcgtaagcgctctgtctct
ccttcagcagacaacttcagctttgttcctgaacagatctcacctaaccacgaccaaggc
agtgcgcctgcaggtctgaggcctcctgtttcttctgggtctaaacaaaaaaatgaccag
cagtcgctagaaaaaactcaggaagctgacagtgaacagactgtgccactcttacctgct
gctgcacctgtagaccgctcgagtgttcgccccaagaaaaagaaagcagtgggactcttc
cgatga
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integrated database retrieval system
