Astyanax mexicanus (Mexican tetra): 103036243
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Entry
103036243 CDS
T05042
Symbol
rapgef2a
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04010
MAPK signaling pathway
amex04517
IgSF CAM signaling
amex04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103036243 (rapgef2a)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
103036243 (rapgef2a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
103036243 (rapgef2a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
PDZ
RA
PDZ_6
cNMP_binding
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
103036243
NCBI-ProteinID:
XP_022537493
LinkDB
All DBs
Position
25
Genome browser
AA seq
1506 aa
AA seq
DB search
MASYVDNSFRQAIMRSPAERTQQDLQIVYSYLHGMEALSNLREHQLRLMCETVRYEQHEA
NEVLYYPDDIGTCWYILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEASEMIVV
DYVEESEEYFQRQASHRQSRRKFRKINQRGERQTIIDTVEHYPASKPPLPPGYHTECSKS
QLPADFSKLHLSDSLHLHMSSSQSRSSIASDSGSSSLSDIYQATESECGDVDLSGLPETA
VDSDDEEDDEDVGRSSDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFVQQLPAFASLSVS
VRRELCAVMVFAVVERAGTIVLNHGEELDSWSVILNGAVEVMYPDGQCETVGMGGSFGVS
PSMEKELMVGVMRTKVDDCQFVCIAQQDYCCILNQVEQNTQRVEEEGEIVMVKEHRELDR
TGTRKGHIVVKGTTERLIQHLVEDHSVVDPTYIEDFLLTYRTFVSSPLIVGQRLLDWFND
PGLRDKVTRVVLLWVNNHFSDFEGHPDMTNFLEEFQNYLERDKMTGQLRLLNIACAAKAK
PRVVSITRGSREMPLPFTLIGGAERGTRLFISSVEMGSKAEEAGLKRGDQILEVNGQTFE
NVQLSKATEILKNNLHLSMTVKTNLLVFKELVARVAEERKNGVPHLPKIGDGKKSSRYSV
PDLGVAGQEMVSKKTKAHTVGGRNKLMNILVKTRISILPQKPCSDLGLGQSQDDSIVGLR
QAKPPPPAVPISGNLSSSNPDLAQGQQRIIDYSTQPPAPGFTQLQDQVLRVFKADQQSRY
LLINRDTTAREVANLAIKEFGLGGGPEAYSLCEVSVTPEGVIKQRRLPDQLSKLADRIQL
CARYYLKSNMETETLCSDVEAQELQRESQVCLLSLSCTEIANQLSARNYLLFASVEPTDY
ITDLFKLRPHERPANLRNFEDLINQETFWVATEIVREANQVKRMKIIKHFIKVALHCRDC
KNFNSMFAIISGLNLAPVSRLRATWERLPGKYEKLLSELQEVFDPSRNMAKYRNLLNKHN
LQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAREIRHVVRMASVNMDPTMLF
KTRKKKWRSLGSLSQVSSSSLSEVGTMGPRRRGRRSSFLSAKKLYEAELMSRRVRQYVET
LAYESNEDTLHNLSLQWEPANNTVCKTTAEKRRVEASPATQRSPTPNHPANKKPPGKELP
PFGARSPGSLKKILSLSEEAQERQRRQPDDNQSNASSLLSSPPTSPNVTPRKGPYLAVNE
APDQLSLLSSSSSDIMADDHTHSHTHVLSHAHTHSHAHKTHRTEPDQISLGSYSLNQDQC
DRASLDAADSGRGSWTSCSSGSHDNIQSIPQRIGYYDSRSWETLSEVPSMGRSHSATPIA
SQYWGDDSEGDTGTIKRRGGKEEVPNVPKCPAVGSRRERRFREPPPTPPGYTALSVTEAE
ELNQSYAHGRRPPDYNSALQRSRLIKRSCDLEPPPQPRLPSRLHGYTHCPTPRRPPCDES
EQVSAV
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttatgtggacaacagctttcggcaggcgataatgaggagcccggcggagagg
acgcaacaggacctacagattgtgtactcctatctgcacgggatggaagcactgtccaac
ctgagagaacaccagctcaggttgatgtgtgaaacagttcgctatgagcagcacgaggcc
aatgaggttttatactatccggatgacatcgggacctgctggtacatcctgctctctgga
tcggtcttcattaaggagtccatgtttcttccacgcagcagttttgggaagcgctccgcg
ggcagtcttcgccgagggtgcgagtgcattgttctggaagcctcagaaatgatagtggtg
gactacgtggaggaaagtgaggagtatttccagaggcaggcgtctcaccgacagtccaga
agaaagttcaggaaaataaaccagcgcggcgagagacagacaatcatcgacacagtcgag
cactatccggccagcaagcctcctctgccgcctggataccacacagaatgctcgaaatcc
cagcttcctgcagatttctccaagctccacctctccgacagtctccacctccatatgtcc
tccagccaatcaagatccagcatcgccagtgactctggaagcagtagcctatcggatatt
taccaggctacagagagcgagtgtggagatgtggacctcagtgggcttcctgaaacagca
gtggactcagatgacgaagaggacgacgaagacgtggggaggtcctcggaccccctcatg
agtcgggacatagtgagagactgtctggagaaggacccaatggatcgaacagacgatgat
atcgagcagttgctggagttcgtgcagcagctcccggcgtttgcgagtctcagtgtgtcc
gtgaggcgagagctctgtgccgtcatggtgtttgccgtggtggagcgggcagggaccatc
gttctcaaccacggagaagagctggactcctggtccgtaatcctgaatggggcggtggag
gtgatgtaccctgacggacagtgcgagactgtggggatgggcggcagcttcggcgtctct
ccctccatggagaaggagctgatggttggcgtcatgaggaccaaagtggacgactgtcag
tttgtgtgtatagcacagcaggactactgctgcattctgaatcaggtggagcagaacaca
cagcgagtagaggaggagggcgagatcgtcatggtgaaggagcatcgagaactcgaccgt
acgggaacccgcaagggccacatcgtcgtcaagggaacaaccgagcgattgatccagcat
ttagtggaggatcactcggtggtggatcccacgtacatcgaggacttcctgttaacctac
cgcaccttcgtatccagtcctctcatcgtgggccaaagactactggactggtttaatgac
cccggtttacgagataaggtgacgcgggttgtgttgctgtgggtcaacaatcacttcagc
gactttgaaggacatcctgacatgaccaacttcctggaggagttccagaactatttggaa
agagataagatgaccggtcagctgcggctgctgaacatcgcgtgtgccgccaaagccaag
cctcgagtagtctccatcacgaggggctctcgggagatgcccctccccttcactctgatt
ggtggagcggaacggggaacacgcctcttcattagcagtgtggaaatgggcagcaaggca
gaagaggcggggcttaagcgtggagaccagatactggaagtgaatggacagacgtttgag
aacgttcagctgtctaaagccaccgagatcctcaagaataacctgcatctttccatgact
gtcaaaaccaacctgctggtctttaaggagcttgtggctcgagtagcggaggagcgtaag
aacggcgttccgcatcttccgaagatcggcgatgggaagaaaagctcccgttactccgtg
ccggatctcggggtcgcaggccaggaaatggtcagcaaaaagaccaaagcgcacactgtg
ggcggccgcaacaaactgatgaatatcctggtcaagacgcgcatcagcatcctacctcag
aaaccatgcagtgacctcgggttggggcagtcgcaggacgacagtattgtgggactgagg
caggcgaagccgcctccacccgccgtacccatcagtggaaacctatcatccagcaacccc
gacctggcacaaggccaacagcgcatcatcgactacagcacgcaaccacccgcacctgga
ttcactcagctgcaagatcaggtgctgcgagttttcaaggccgaccagcagagccgctac
ctgctgatcaacagggacaccacggcccgagaggtggctaatctggccatcaaagagttt
ggtctcggcgggggtccggaagcttattcgctgtgcgaggtgtccgtcacgccggagggc
gtcatcaaacagaggcgactcccggatcagctctccaaactggccgacaggattcagctc
tgcgccaggtactaccttaagagcaacatggagacggaaacgttgtgttcggacgtcgag
gctcaggagctgcagcgggagtctcaggtgtgcctgctgtctctgagctgcacggagata
gccaatcagctctcagcacgcaactacctgctgttcgccagcgttgagcccaccgactac
atcacggacctctttaagctccgcccacacgagcggccggccaacctccgcaacttcgag
gacctcatcaaccaggagaccttctgggtcgccacggagattgtgcgggaagccaatcag
gtgaagaggatgaagatcatcaagcacttcatcaaggtggctcttcactgcagggactgc
aagaacttcaactccatgttcgctatcatcagcgggctgaatctagcccccgtctctcgg
ctacgcgctacttgggagcggttgccgggtaaatacgagaagctgctgtcggagctgcag
gaggtgttcgatccgtcgaggaacatggccaaatatcgcaacctgctgaacaagcacaac
ctccagcctcccatcatccctctcttccccgtcatcaagaaagacctcaccttcctccac
gagggcaacgattctaaagtggacggtctggtgaactttgagaaattgaggatgatcgcg
cgagagatcaggcacgtggtcagaatggcttccgtcaacatggacccgacgatgctgttt
aaaaccaggaagaaaaagtggaggagtcttgggtctctgagtcaggtgagcagctcctcc
ctctcggaggtggggacgatggggccgaggaggcggggccggcggagttccttcctcagc
gccaagaagctgtacgaggcggagctgatgagcaggcgcgttcgccagtacgtggagacg
ctcgcgtacgagagcaacgaagacaccttgcacaacctctcgctgcagtgggagcccgcc
aacaacacggtttgtaagaccactgcagaaaagcgcagagttgaagcttctccagccacg
cagagaagccccacccccaaccacccggcaaacaagaaaccacccggcaaagaattgcct
ccatttggtgctcgatcccctggatcattaaagaagatcctctcgctctcggaagaggcg
caagagaggcaaagaaggcagccagacgacaaccaatcaaacgcctcctctttactctcg
tcgccgcccacttcacccaacgtcacgcctagaaaagggccgtacttggctgtaaatgaa
gctccagatcagctgagccttctgagctcctcctcctccgacatcatggcggacgaccac
acacactctcacacgcacgtcctctctcacgcgcacacacactcgcacgctcacaaaaca
caccggacggagccggaccaaatcagcctcgggtcctactcgctgaaccaggaccagtgt
gaccgagcctcattggacgcggccgacagtgggcggggcagctggacttcctgctccagc
ggttcccacgacaacatccagagcattccgcagcgcataggctactacgacagccgcagc
tgggagacgctgtcggaggtgccatcgatggggcggagtcactcggccacgcccatcgca
tcacagtactggggcgacgattctgagggcgacacaggaacgataaagcgcagagggggg
aaggaagaggttccaaacgttccgaaatgcccggcggtgggaagtcgcagagagcggcgt
ttccgggagccaccgcccaccccgcccggctacaccgcgctgtccgtcaccgaggcggag
gagctgaaccagagttacgcccacgggagacgcccccccgactacaactccgccctgcag
agatcccgcctcataaagaggtcatgtgacttagaacctcctccacaaccacgcctaccc
agccgcctccacggatacacccactgtcctacgccacggcgaccgccgtgcgatgaaagt
gagcaggtatctgctgtatga
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