Astyanax mexicanus (Mexican tetra): 103036503
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Entry
103036503 CDS
T05042
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03420
Nucleotide excision repair
amex04115
p53 signaling pathway
amex04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103036503 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
103036503 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
103036503 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103036503 (ddb2)
03400 DNA repair and recombination proteins [BR:
amex03400
]
103036503 (ddb2)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
103036503 (ddb2)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
103036503 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_RIG_2nd
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_NWD2_C
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
103036503
NCBI-ProteinID:
XP_007256037
Ensembl:
ENSAMXG00000000525
UniProt:
A0A8B9KC22
LinkDB
All DBs
Position
9:24646336..24656486
Genome browser
AA seq
504 aa
AA seq
DB search
MFQTENCCTMARGKRKEEGARKRQNAEVSETLSKKLKAKKDGRAGSNTVYIQASVKWTGG
LKKCSQISIPHYIYKSSLGQSIHSQLRQCLQEPFIRSLESFRLHRTASPFERRVTCLEWH
PSHPSTVAVGSKGGDIMLWDYEILNKKSFIQGKGAGDFIGGMKFCPTDISKVYAAAGDGT
VTLQSFEGLPSETLSRTPDCGHDHHSLCYWYCCLDVSVSRQMLVTGDNAGSLLLIGLDGT
KIFSEKLHKAKVTHAEFNPRCDWLVATSSVDNTVKLWDLRNMKDKSSYLHEMKHEKPVNA
AYFNPTDCTKLLTTDQMNEIRIYSSSDWSKPAQVIVHPHRQFQHLTPIKATWHPIYDLIV
AGRYPDDRVFVGDERTIDIFDANTGKLLYKLKDPNTNGIVSLNKFNPLGDVLASGMGYNI
LIWNRDDTVSQSPCRRQREEGSEPGGRAGSSRGQRGNPQRPRGDRRGTADSAKVKKKLAS
LESTETNSKTRSKTESKMLKNKKS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagacagaaaactgctgtacaatggcgagagggaagaggaaagaggagggcgcg
agaaaacgacagaatgctgaggtttctgaaacgctttccaaaaagctgaaagcaaagaaa
gatggacgggctggatcaaacacagtgtacattcaggcaagtgtaaagtggactggagga
ctgaagaaatgcagccagataagcatacctcattacatctacaagagctccttaggacag
agcatccactctcaactacgacagtgtctccaagagccttttattcgctccctggaatca
ttcagactgcaccgaacagccagcccttttgaacggagggtcacatgtctggagtggcat
cccagtcatcccagcactgtggcagtgggctctaagggtggagacatcatgttgtgggac
tatgaaattttgaacaagaaatccttcatacaagggaaaggagctggtgactttattggg
ggcatgaagttctgccccacagacatatccaaagtctatgctgccgctggtgatggcact
gtgactttgcagagctttgagggtctcccaagcgagacactatctcgaaccccagactgc
ggccatgatcaccactctctttgctactggtactgctgtctggatgtgtccgttagccgc
caaatgcttgtaactggagacaatgcaggatcccttcttttgattggtttggatggaaca
aagattttcagtgaaaagctgcacaaagccaaagtgacgcatgcagaattcaaccctcga
tgtgactggctagtggcaacatcgtctgtagacaacactgtcaagctgtgggatctcagg
aacatgaaggataaaagcagttacctgcatgaaatgaaacatgagaaaccagtaaatgct
gcctatttcaaccccacggactgcaccaagctcctcaccacagaccaaatgaatgagatc
aggatttattcctcaagtgattggtctaagccagctcaggttattgtgcatccacatcgc
cagttccagcatctgaccccaatcaaggcaacctggcatcccatatatgacctcattgtg
gctggccgttatcctgatgaccgtgtgtttgttggtgatgagagaactattgatatcttt
gatgctaacactggcaaactcctttataagctgaaagaccccaacaccaatggaattgta
tctctcaataaatttaacccattgggggatgtgttggcatctggaatgggctataatatt
ttgatatggaaccgagacgatactgtgagccagagtccgtgtaggagacagagggaggaa
ggatcagagccaggagggagagctggaagctccagaggccagcgaggcaatccacagcgg
ccccgcggtgacagacgtggaactgcagacagtgccaaggtgaagaaaaaactggcatca
ctggaatcaactgagaccaattcaaaaaccagaagcaagactgaaagtaaaatgctgaaa
aacaagaagtcctag
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