Astyanax mexicanus (Mexican tetra): 103036536
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Entry
103036536 CDS
T05042
Symbol
sox10
Name
(RefSeq) transcription factor SOX-10
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103036536 (sox10)
Transcription factors [BR:
amex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
103036536 (sox10)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sox_N
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
103036536
NCBI-ProteinID:
XP_007238942
Ensembl:
ENSAMXG00000036977
UniProt:
A0A3B1IU21
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All DBs
Position
3:9711999..9730056
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AA seq
483 aa
AA seq
DB search
MSGEEQSLSEVEMSPGVSDDGHSMSPGHSSHATGGGDSPLPGGQAQLSGEDASRVPGGLP
KAEEEDDRFPIGIREAVSQVLNGYDWTLVPMPVRVNSGSKSKPHVKRPMNAFMVWAQAAR
RKLADQYPHLHNAELSKTLGKLWRLLNENDKRPFIEEAERLRKQHKKDYPEYKYQPRRRK
NGKPGSSSEQDGHTDSEVSHSQSHYKSLHLEVAHGGGAGSPLADGHHPHASGPNHSPPTP
PTTPKTELQGGKSGEGKREGGASSRSALGVGSDGSSASSSASGGGKPHIDFGNVDIGEIS
HEVMANMEPFDVNEFDQYLPPNGHHQQGSGASASSSTTPYSYGISSALAAASGHSATWLS
KQQQHLGSDSGGKTQIKSETHFSSEATPTGSHVTYTPLSLPHYSSAFPSLATRAAPFADY
ADHQASSSYYAHSSQASGLYSAFSYMGPAQRPLYTAITDPASGPQSHSPTHWEQPVYTTL
SRP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagaggagcagagtctgtctgaggtggagatgagtccaggagtctcagatgat
ggtcattccatgtcccccggccactcgtcccacgccacgggtggaggcgactcacctctg
cccggtggacaggcgcagctgagtggcgaggatgcctccagggtgcctggcggcctcccg
aaagcagaagaagaggacgaccgcttccctattgggattcgtgaggcagtcagccaggtt
ctgaacggctacgactggacgctggtgcccatgccagtccgtgtcaactcgggcagcaag
agcaagccacacgtcaagaggccgatgaacgccttcatggtgtgggcgcaggcggcacgc
cggaaactggctgaccagtacccgcacctgcacaacgcagagctcagcaagacattgggt
aaactgtggaggctcctgaacgagaacgataagaggccgtttattgaggaggcggagcgt
ctgaggaagcagcataagaaagattacccagagtataagtaccagccccgcagacgcaag
aacggcaaacccgggtccagctccgagcaggacggccacacggactccgaggtcagccac
agccaatcacattacaagagcctccacttggaggtggcccatggaggaggggcagggtct
cctctggcagatggacaccaccctcatgcttcaggtccaaaccacagccccccaactcct
cccaccactcccaaaacagagcttcaaggcggcaaatcaggtgaggggaagagagagggc
ggggccagcagccggagtgctctgggagtggggtcagatggaagttccgcctcttcctct
gcttccggaggcggcaaaccacacatcgacttcggaaacgtagacattggcgagattagc
catgaggtgatggccaacatggagcccttcgatgttaatgagtttgaccagtatctgcca
cccaatggccaccaccagcagggctcgggggcatctgccagctcaagcaccaccccctac
tcctacgggatctcctcagcattggcagcagccagcggtcactcggctacctggctgtcc
aaacagcagcagcacttgggctcggatagtggtgggaagacgcagatcaagagtgagacc
catttttccagtgaagccacgcccacagggtctcatgtgacctacacaccgctgagcctg
ccacactacagctctgcattcccttcgctggccaccagagcggcgccattcgctgattac
gccgatcatcaagcttccagctcctactatgcccactccagccaggcctctggcctttac
tccgccttttcttacatgggccccgcccagcgacctctttacactgccatcactgacccc
gcctccggcccccagtcacacagccccacccactgggagcagccggtgtacaccaccctc
tctcgaccatga
DBGET
integrated database retrieval system