KEGG   Astyanax mexicanus (Mexican tetra): 103036536
Entry
103036536         CDS       T05042                                 
Symbol
sox10
Name
(RefSeq) transcription factor SOX-10
  KO
K09270  transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:amex03000]
    103036536 (sox10)
Transcription factors [BR:amex03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    103036536 (sox10)
SSDB
Motif
Pfam: Sox_N HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 103036536
NCBI-ProteinID: XP_007238942
Ensembl: ENSAMXG00000036977
UniProt: A0A3B1IU21
LinkDB
Position
3:9711999..9730056
AA seq 483 aa
MSGEEQSLSEVEMSPGVSDDGHSMSPGHSSHATGGGDSPLPGGQAQLSGEDASRVPGGLP
KAEEEDDRFPIGIREAVSQVLNGYDWTLVPMPVRVNSGSKSKPHVKRPMNAFMVWAQAAR
RKLADQYPHLHNAELSKTLGKLWRLLNENDKRPFIEEAERLRKQHKKDYPEYKYQPRRRK
NGKPGSSSEQDGHTDSEVSHSQSHYKSLHLEVAHGGGAGSPLADGHHPHASGPNHSPPTP
PTTPKTELQGGKSGEGKREGGASSRSALGVGSDGSSASSSASGGGKPHIDFGNVDIGEIS
HEVMANMEPFDVNEFDQYLPPNGHHQQGSGASASSSTTPYSYGISSALAAASGHSATWLS
KQQQHLGSDSGGKTQIKSETHFSSEATPTGSHVTYTPLSLPHYSSAFPSLATRAAPFADY
ADHQASSSYYAHSSQASGLYSAFSYMGPAQRPLYTAITDPASGPQSHSPTHWEQPVYTTL
SRP
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgtccggagaggagcagagtctgtctgaggtggagatgagtccaggagtctcagatgat
ggtcattccatgtcccccggccactcgtcccacgccacgggtggaggcgactcacctctg
cccggtggacaggcgcagctgagtggcgaggatgcctccagggtgcctggcggcctcccg
aaagcagaagaagaggacgaccgcttccctattgggattcgtgaggcagtcagccaggtt
ctgaacggctacgactggacgctggtgcccatgccagtccgtgtcaactcgggcagcaag
agcaagccacacgtcaagaggccgatgaacgccttcatggtgtgggcgcaggcggcacgc
cggaaactggctgaccagtacccgcacctgcacaacgcagagctcagcaagacattgggt
aaactgtggaggctcctgaacgagaacgataagaggccgtttattgaggaggcggagcgt
ctgaggaagcagcataagaaagattacccagagtataagtaccagccccgcagacgcaag
aacggcaaacccgggtccagctccgagcaggacggccacacggactccgaggtcagccac
agccaatcacattacaagagcctccacttggaggtggcccatggaggaggggcagggtct
cctctggcagatggacaccaccctcatgcttcaggtccaaaccacagccccccaactcct
cccaccactcccaaaacagagcttcaaggcggcaaatcaggtgaggggaagagagagggc
ggggccagcagccggagtgctctgggagtggggtcagatggaagttccgcctcttcctct
gcttccggaggcggcaaaccacacatcgacttcggaaacgtagacattggcgagattagc
catgaggtgatggccaacatggagcccttcgatgttaatgagtttgaccagtatctgcca
cccaatggccaccaccagcagggctcgggggcatctgccagctcaagcaccaccccctac
tcctacgggatctcctcagcattggcagcagccagcggtcactcggctacctggctgtcc
aaacagcagcagcacttgggctcggatagtggtgggaagacgcagatcaagagtgagacc
catttttccagtgaagccacgcccacagggtctcatgtgacctacacaccgctgagcctg
ccacactacagctctgcattcccttcgctggccaccagagcggcgccattcgctgattac
gccgatcatcaagcttccagctcctactatgcccactccagccaggcctctggcctttac
tccgccttttcttacatgggccccgcccagcgacctctttacactgccatcactgacccc
gcctccggcccccagtcacacagccccacccactgggagcagccggtgtacaccaccctc
tctcgaccatga

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