Astyanax mexicanus (Mexican tetra): 103036564
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Entry
103036564 CDS
T05042
Symbol
lrit3a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amex04990
]
103036564 (lrit3a)
Domain-containing proteins not elsewhere classified [BR:
amex04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
103036564 (lrit3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
Ig_3
I-set
LRR_1
Ig_2
LRR_5
LRR_14
ig
V-set
C2-set_2
Motif
Other DBs
NCBI-GeneID:
103036564
NCBI-ProteinID:
XP_007245574
Ensembl:
ENSAMXG00000041737
UniProt:
A0A3B1KE03
A0A8B9RCJ4
LinkDB
All DBs
Position
10:complement(33078927..33095375)
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AA seq
652 aa
AA seq
DB search
MQRLLVVQVLLLCCCRLVQPFCPSQCTCVFHSRSDGTGTRTVLCNDPDMSDIPVNVPVDT
VKLRVEKTAVRRIPTEAFYYLTELQYLWITYNSITSVDQGSFYNLKVLHELRLDGNQIAT
FPWESLREMPSLRTLDLHNNRLTSIPVEAAPYLVNITYLDISSNKLTTLPSDLVDIWPPF
SGMPPTFNASQKIVLGLQDNAWFCDCRISKLIELSKMTDIPVVLMDQYLSCSGPENLAGV
LFQRAELDQCVKPSVMTSATKITSSLGSNVLLRCDATGYPTPTLMWSKRDRSAFNNTVVQ
ESPGEGVRWSILSLHGIVVKDAGVYRCKAKNVAGNAEAFITLSLAGMDSTTVSPPPSITK
KPDENPGLVTQSPPPVTGTVVLTPTTTFIPTTSKPPMTTVSPMSSRMNLGPGGGIQRSPP
AGDTPAKVQQGKDVKSLSGSNKTRKKGSPYIKDIEVVEETGDTVVVLWTSEDLPSDTPLS
VAYFPYDAEDSKETLETEVGLGKLLLENLFPNQAYTVCLVAKGYMSGKGQCVNFSTLDAV
ADDGQNKWLMIASGIACAVALPLIILLLYKIVSLYCKGRSGRSGGTDEDLSKETYVKFET
LTMKQRTLNGPGNDLWARRQTQESERMLLCSRSSIDSQMTYKSDSSRSEYLC
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtctcctggtggttcaggtgctgctgctgtgctgttgccgtttggtccagccg
ttctgcccgtcgcagtgtacctgtgtgttccactcccgcagtgacggaaccgggaccagg
accgtcctttgcaatgacccggacatgtccgacatcccggtgaacgtcccggtggacaca
gtgaagctgcgggtagagaaaacggccgtgcgtcggatccccaccgaggccttttactac
ctgacggagctgcagtacctgtggatcacttacaactccatcacctccgtggaccagggc
agcttctacaacctgaaggtcctgcacgagctgcggctggacggcaaccagatcgccacc
ttcccctgggagtctctaagggagatgcctagcctgcggaccctcgacctgcacaacaac
cgcctcaccagcatccccgtggaggcggcgccttacctggtcaacatcacctacctggac
atctccagcaacaagctcaccaccctgccctctgacctggtggacatctggcccccgttc
tcaggaatgccgcccaccttcaacgcttcccagaagatcgtgctgggtctccaggacaac
gcgtggttctgcgattgcaggatctccaaactcatcgagttgtccaagatgaccgacatc
cccgtggttctgatggaccagtatttgtcctgcagtggcccagagaacctggctggggtt
ctgttccaacgagcggaactggaccagtgcgtcaaaccgtcagtgatgacctcagccact
aaaatcacgtcatcgctcggcagtaacgttctcctccgctgtgacgccacgggatatcct
acccccaccctcatgtggagtaaaagggataggtctgcttttaataacacagttgtgcaa
gaatctcctggtgaaggtgtccggtggtccatcctcagcttgcacgggatcgtggtaaag
gatgctggcgtgtaccgctgcaaggccaagaacgtcgcaggaaatgcggaggccttcatc
accctctccctggctgggatggactctacaaccgtgtccccgccaccgagcatcaccaag
aagcctgacgagaatccgggactggttacccagtctccacctccagtcactggcactgtg
gttctgacacctactactactttcatcccaacgacctccaaaccacccatgaccacagta
tcacctatgtcaagccggatgaaccttggcccgggtggaggcattcagaggtccccacct
gctggagatacaccggctaaggttcagcaaggaaaggacgtcaaaagtctgagtgggagc
aacaaaacgaggaaaaaggggagtccctacatcaaggatattgaagtggtggaagagact
ggagatacggtggttgtgttatggacaagtgaggatttgcctagcgacacacccttgtct
gtggcgtacttcccgtacgatgcggaagacagcaaggaaacgttggaaactgaggttggg
ttgggtaaacttcttttggagaacctgtttcccaaccaggcctacacggtctgcttggtt
gccaaaggttacatgtctggaaagggtcagtgtgtgaattttagtactctggacgccgtt
gcggacgatggccagaacaagtggctaatgatagcgagtgggattgcttgcgctgttgca
ctcccacttattattcttctcctttataagattgtatcgctctactgcaaaggtagaagc
ggtagaagtggtggaacggatgaagacctctcgaaagagacatatgtaaagtttgagacc
ctcacaatgaaacagaggacattgaacggaccagggaatgacctctgggctcgacggcag
acgcaagaatcggaaaggatgctactgtgttcacgatcaagtatagactcccaaatgacc
tacaagagcgacagttcacggtcggagtacctatgctag
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