Astyanax mexicanus (Mexican tetra): 103036611
Help
Entry
103036611 CDS
T05042
Symbol
gigyf2
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103036611 (gigyf2)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103036611 (gigyf2)
Surveillance factors
Other surveillance factors
103036611 (gigyf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
103036611
NCBI-ProteinID:
XP_022534714
Ensembl:
ENSAMXG00000001520
LinkDB
All DBs
Position
4:complement(45212565..45247416)
Genome browser
AA seq
1379 aa
AA seq
DB search
MRCHVTLFQPSCGNERERTSHTNSALSVKSRDFLGKMAETQTLNFGPEWLRALSGGGGSS
SVASPPLSPALPKYKLADYRYGREEMLALYVKDNKIPVDLHDKEFLPILQEEPLLPLALV
PFTEEEQRNFSMSVNSAAVLRLTGRGVGVVAGATRGRSTSRGRGRGRGEGGFYQRSFDDV
EGGFGRGAREMHRSQSWEERGDRRFEKPTRKEPDGAPAHFQLNHIRGNYEDGVPGGLARK
HDFARSESENWRMSRDEQNGEDEEGGGWRLAGSRRDNERWCPPSPDGPRLAGWREHPDQR
RRFPFDSRGEEERGGGYRRARSGSGSVEDERDSLPEWCLEDAEEETGTFDSSGAFLSLKK
ASKEPILEEAELDFRPLEECEERSEKEYNEAENTKEPEVKHQTARHEDGRKSEEPSPPPV
QVPAKVPAPEPAPAVSLPTSQPERAEEPERPAERPAAPEIRATSAPIHTPLPISISHTTN
TLSALTDLPSSLPPSLLPPQPVAPPPQQPKPMEVPVVVHAALSFKSIITPIGQPPAMPTD
TDEDEGLKHFEQEAEKMVAYLHDGGVDDERLAAKTAERPKPAGLPLSHEASLKWFYKDPQ
GEIQGPFNNHEMSEWFQAGYFTMTLLVKRGCDEGFHPLGELVKMWGRVPFAPGPAPPPIL
GDSDQERLKRQHALSVYQIQQLQYQYMLRHQQYAQALAQQKAVLTSAPPPTQQQQQLNLL
LHQALKLRTPEQQQSLLPPVTRSMSVPDSGSVWDMPIPSTQASCTPSIQPAAPNTWEGAS
VWDLPIETMTQASIDQIQLEKAKLEMERREAELRAKREEEERKRLEEVLRARQEEECKRL
EEEELARRKQEEALRRQREQEESQRRQKEEEERLAQEEALRRLEEKRREEEERRQREEFL
RNQEEERRKQEELEAQRRQEEERRLEEEAAAAAAAAAAALVRQQQEEQKRREQELQRQQE
LQRQQEAQRQQELQKQQEAQRQQELQRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSKWG
QQSTATSSLSQTQNTLSLSEIQKLEEERERQSKEEQRRQQQEFQRQQQQQQQQQAQTKLS
GWGSVAKQPAATKSLLEIQQEEAQQMKQRKDQQPPVPVPQQNRTQNRTVLTSVWGSVSNT
SSQWTPDSSIWGDAQNSNMGFWDDAVKETVQPPPPRKSNAQKNKGNANLSNSNSAKSNKK
VEEEEKLLKLFQGANKSQDSFMQWCEQTLHTLNTANNLDVPTFASFLKEVDSPYEVHDYV
RAYLGDSPQAKDFAKQFLERRAKQNVNQQKPLQIQQQKNQQQDSVWGVNQTVSQAVFQSN
HSSMQQQQQQQQQCFETVTSGKKKKKQKMVRADPSLLGFSVNASSERLNMGEIETLEDF
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgtcatgtgacgctttttcagccatcttgtggaaacgaaagagagagaacttcg
catacaaactcagcgctgtcagttaaaagcagagactttctaggaaaaatggcagaaacc
cagacgcttaactttggaccagaatggctccgtgccctgtctggtggaggggggagcagc
agtgtcgcgtctcctcctctttcacctgcattgccaaagtataaacttgcagactatcgc
tatgggagagaagagatgctagcactttatgtaaaggataacaagattccggtagatcta
catgacaaggagtttctgcctattttacaagaggagccgctactgcctctggcccttgtt
ccatttacagaggaggaacagagaaatttctccatgtctgtaaacagtgcggcagtgctg
cgtctgactgggcgaggcgtaggcgtggttgcaggggcaacccgaggtcgaagtacctca
cgcgggcgagggagaggaagaggagaaggaggtttttaccaaagaagttttgatgacgtg
gagggtgggtttggtcgcggcgcgagagagatgcatcgctctcagagctgggaggaaagg
ggagatagaaggtttgaaaagccaactcgaaaagagccagatggagctccagcccacttt
cagctcaaccacatacggggtaactatgaggatggtgttccagggggtttggcgagaaaa
catgactttgcacgatctgaaagtgagaactggcgaatgtctcgcgatgaacaaaatggt
gaggatgaagaggggggcggttggcggctggcggggtcccggcgcgataatgagcgatgg
tgccccccgagtccagatggaccacgtttggctgggtggcgggaacacccagaccagcgc
cgccgcttcccctttgactcacggggggaggaggagcgtggtgggggctaccgcagggcc
cgctcaggcagtggcagcgtggaagacgagcgggatagtctgcctgaatggtgtctggag
gatgctgaggaagaaacgggcacctttgattcatctggggcattcctctctctcaagaag
gcttctaaggagccaattctggaggaggcagagctagacttccgtccattggaggagtgt
gaagaacgctcggagaaagagtacaacgaagcagagaataccaaagagcctgaagtgaag
caccagactgccagacatgaggatggcaggaaatcagaagagccctctccacctcctgtt
caagtgccggcaaaagtccctgctccggaaccagctcctgcagtatccctgcccaccagt
cagccagagagagcagaagagcctgagagaccagcagagagaccggcagctcctgaaatc
agagccacttccgctccaatccacacaccccttcccatatctatatcccacacaacaaat
acactcagtgcacttacagatcttccatcctcacttcctccttcgctgttgcccccgcag
ccagtagcccccccaccccagcagcccaagcccatggaagtgcctgtagtggtgcatgct
gctctctccttcaagagcatcattactcccattggccagcctccagccatgcccaccgac
acggacgaggatgaggggcttaagcactttgaacaggaagcggagaagatggtggcttat
ctgcatgatggcggcgtggatgatgagcgcttggctgctaagaccgcagagcggcccaaa
cccgccggcctaccgctgtcccatgaggcttcacttaaatggttctacaaagaccctcag
ggagagattcagggtccttttaataatcacgagatgtctgagtggtttcaggctgggtat
tttaccatgactctgttggttaagaggggctgtgatgagggctttcatcctctgggagaa
ctggttaaaatgtggggcagagtgccgttcgcccctggtcctgcaccacctcccatactg
ggggattcggaccaggagaggttgaagaggcagcatgctttaagtgtatatcagattcag
cagttgcagtaccagtacatgctcaggcatcagcagtatgctcaggcactagctcagcag
aaagctgtgctcacttcagctcctcccccaacacagcagcaacagcagctcaacctactc
ctgcaccaggccctcaagctcagaactccagaacagcagcagagcctgttgccgccagtg
acacgttccatgtccgttccagattcgggttcagtttgggatatgccgattccttctacg
caagcttcttgtacccccagcattcaaccggcagctcctaacacttgggaaggggccagt
gtgtgggatcttcccattgagacgatgactcaagcttctattgaccagatacagctggag
aaagcaaagctggagatggaacggagggaggcagagcttcgggccaaaagggaagaggag
gaacggaagcgattagaggaggtgctgcgggcacgacaggaggaggagtgcaaacgtctg
gaggaagaggagctggcacggcggaaacaggaggaggcactaaggaggcagcgagaacaa
gaggagtcacaacggcggcagaaagaggaagaggagcgtctggcccaggaggaagcactg
cgaagattagaagagaagaggagagaggaagaagaaaggaggcaaagggaagagttcctt
cgtaatcaggaagaggagcggcggaagcaggaggaactcgaagctcagaggaggcaagaa
gaagagaggcgattagaggaggaggcagcagcggctgctgcagcagctgcagctgctttg
gttcgacaacagcaggaggagcagaagagacgagaacaggagcttcagaggcagcaggaa
ctgcaaaggcaacaagaggctcaaaggcaacaagagctccagaagcagcaggaggctcaa
aggcaacaggagctgcagagacagcggcaacagcagcaggaggccctgcgccggctccag
cagcagcaacagcagcagcaactcgctcaaatgaagcttccatcgtcgtctaagtggggt
cagcagtcaaccgcaacctcctccctttcgcagactcagaacactctgtctctcagtgaa
atccagaagcttgaggaggagagagaacgacagtctaaagaggagcagcggcgccagcag
caggagttccagaggcagcagcagcagcaacagcaacagcaggcccagaccaagctctcg
ggctggggcagtgtagccaagcagcctgctgccacaaagtccctgctggagatccaacag
gaggaggcccaacagatgaagcagaggaaagatcagcaaccgcctgttcctgttcctcag
caaaaccgcacccagaatagaaccgttttgacctcagtttggggttcagtgagtaacact
agctctcagtggacgccagacagcagtatctggggtgacgctcagaactcgaacatgggc
ttctgggacgatgcagttaaggagaccgttcagcctccacccccgcgcaagagcaacgca
cagaaaaacaagggaaacgctaacctcagtaatagcaacagtgctaaatccaataaaaaa
gtggaagaggaggagaagctgttgaagctcttccagggagccaataagagtcaggacagc
ttcatgcagtggtgtgagcagacgctacacacgctcaacactgccaacaatctggacgtc
ccgacatttgcatcgttcctgaaggaggtggactctccatacgaggtgcacgattatgtg
cgagcatatctgggagactcaccccaggctaaggactttgccaagcagttcctggagcgc
cgtgccaaacagaacgtcaaccagcaaaaacctctgcagattcagcagcagaaaaatcaa
cagcaggactctgtgtggggggtgaaccagactgtatctcaggcagtgtttcagtccaac
cactcctccatgcagcagcagcagcagcaacagcagcagtgctttgagacggtcacctcg
ggcaagaaaaagaagaaacagaagatggtgagagcagatccaagtttgttaggtttttcc
gtcaatgcctcgtctgagcgattaaatatgggtgagattgagactctggaggacttttga
DBGET
integrated database retrieval system
