KEGG   Astyanax mexicanus (Mexican tetra): 103036711
Entry
103036711         CDS       T05042                                 
Symbol
vamp8
Name
(RefSeq) vesicle-associated membrane protein 8 isoform X1
  KO
K08512  vesicle-associated membrane protein 8
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04130  SNARE interactions in vesicular transport
amex04140  Autophagy - animal
amex04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    103036711 (vamp8)
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    103036711 (vamp8)
   04140 Autophagy - animal
    103036711 (vamp8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amex04131]
    103036711 (vamp8)
Membrane trafficking [BR:amex04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   VAMP
    103036711 (vamp8)
SSDB
Motif
Pfam: Synaptobrevin ODV-E18 LRRC37AB_C Prominin Baculo_F RNF152_C Ferlin_C DDB_G0292058_C Myelin_PLP MCU Baculo_11_kDa Fzo_mitofusin DUF3671 Pox_EPC_I2-L1 RIFIN Orf78
Other DBs
NCBI-GeneID: 103036711
NCBI-ProteinID: XP_007237878
Ensembl: ENSAMXG00000001657
LinkDB
Position
22
AA seq 135 aa
MSAHSVYLENPYVAAHTEQGGAAAAASAAEVDRVKALQSQVDGVKDIMTQNVDRILARGE
RLDDLMDKSEGLEDGAKTFKQTSQKVARAFWWKNVKLILVIVVVVVIILLIIILLATGVI
PTSSPSPTPPKPPTK
NT seq 408 nt   +upstreamnt  +downstreamnt
atgtccgctcacagcgtgtacctggagaacccatatgttgctgctcatacggagcagggg
ggagcggcggcggcagcttctgcggcggaagtggaccgggtcaaggccctgcagtcgcag
gtggatggcgttaaggacatcatgacccagaatgtggatcggattctggcccgtggcgag
cggctggacgatctgatggacaagtctgagggcctggaggatggggccaagacatttaag
caaacgtctcagaaggtggctcgtgcgttctggtggaagaatgtgaagctgatcctggtg
attgtggtggttgtcgtcatcatcctgctgatcatcatcctgctagccaccggagtgatt
ccaaccagttcgccttcacccacaccacccaaaccacccaccaagtga

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