Astyanax mexicanus (Mexican tetra): 103036824
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Entry
103036824 CDS
T05042
Symbol
mgrn1b
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1b isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04120
Ubiquitin mediated proteolysis
amex04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103036824 (mgrn1b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
103036824 (mgrn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103036824 (mgrn1b)
Enzymes [BR:
amex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103036824 (mgrn1b)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103036824 (mgrn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
103036824
NCBI-ProteinID:
XP_049331910
Ensembl:
ENSAMXG00000017741
LinkDB
All DBs
Position
3:60678190..60707203
Genome browser
AA seq
535 aa
AA seq
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MGSVLGRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADTPTDEGAKPRVQYGV
EFTFDSDARVAITIYCQAFEEFSNGMAVYSPKSPVMVSETVHCKRGVSQQFSLPSFKIDF
SEWKEEDLNFDLDRGVFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGTLSPVSFSPVLAQSMDHEEHSSSDSVPP
GFEPISLLEALNGLTAVSPAVPSAPLYDEINFSGSLSGDSRQLSSPEHSGDNGLQKSKIS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAQAHTLLSSSPAPTEDTAGDDAPDSLSPEDEDR
LNSEGDCSSEHSSLTKTESDPPGFSGSMESLITQSTNCSSQPLLCPTSSLHIEDE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggggtcagttctcgggcggaggatcgctggggtggaggatattgacattcaggccaat
tctgcctacagattcccacctaaatccgggaattatttcgctagtcacttcttcatgggg
ggtgagaagtttgacacccctcaccctgagggttacctgttcggggagaacatggacctc
aattttctaggcaaccgtcctgtgcagtttccgtatgtgactccggcacctcacgaacca
gtgaagactctgagaagcctcgtcaacatcaggaaggactcattaagactcgtcaggtat
aaagatgatgcagacacacctactgatgaaggcgcgaagcccagggttcagtatggtgtg
gagttcacctttgattcagacgctcgtgtggcaatcaccatctactgccaggcctttgag
gagttctccaatggaatggctgtttatagtcccaagagtccggtgatggtgtctgaaacg
gtgcactgtaagcgaggggtgagccagcagttctccttaccctccttcaagatcgatttc
tctgaatggaaagaggaagatctgaacttcgatctggacagaggcgttttccccatggtg
atccaggctgtggtggatgaaggagacgattgtttaggacatgcgcatgtgctgctggct
gcctttgagagacatgtggatgggagtttctctgtgaagcccttaaagcagaagcagatc
gtggatcgagttagttacctgctgcaggagatctatggcattgaaaacaagaacaaccaa
gagactaagccctctgatgatgagaacagtgataacagtaacgagtgtgtggtgtgtctg
tcggatctgcgggacacactcatcctgccctgtcgacacctctgcctgtgcaactcctgt
gcggacacactgcgctaccaggccaataactgtcccatctgcagactgccgttccgagct
ctgctgcagatcagagctgtgaggaagaagcctggcactctgtctcctgtatcgttcagc
cctgtgctggcccagagcatggaccatgaagagcactctagctctgattcagttcctcct
ggttttgagcccatctccctgctggaggctctgaacggactcaccgccgtgtccccggcg
gtcccttcagcccctctgtacgacgagatcaacttctccggcagtctgagtggagacagc
cggcagctcagctcccccgagcactccggagacaacggcctgcagaagagcaaaatcagc
aaatcacctgacagcaccctgcgctcgccctcatctccaatccaggaggaggatgaggag
aagctgtcagagatgtctgatgcacaggcccataccctgctgtccagcagtcctgctcct
actgaggacacagccggtgacgacgctcctgattctctgtctcctgaagatgaggacagg
ttgaactcagagggtgactgtagcagtgagcacagcagcctcaccaaaactgagagtgac
ccccctggtttttccggctccatggagagtctgatcactcagagtacgaactgctccagc
cagcctctcctctgtcctacaagcagtttgcacatcgaagatgaataa
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