Astyanax mexicanus (Mexican tetra): 103036832
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Entry
103036832 CDS
T05042
Symbol
ush1gb
Name
(RefSeq) Usher syndrome type-1G protein homolog
KO
K21878
Usher syndrome type-1G protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amex03037
]
103036832 (ush1gb)
Cilium and associated proteins [BR:
amex03037
]
Primary cilia and associated proteins
USH complex and associated proteins
103036832 (ush1gb)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_5
Ank_3
SAM_1
Motif
Other DBs
NCBI-GeneID:
103036832
NCBI-ProteinID:
XP_022526023
Ensembl:
ENSAMXG00000020117
LinkDB
All DBs
Position
15:complement(42527656..42545052)
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AA seq
487 aa
AA seq
DB search
MDDTYHRAARDGRLDLLRQATRRDLNSPDEDGMTPTLWAAHHGHLDSLRLVLGRGGDPDR
CDIWGNTPLHLAAANGHLNCLTYLVSFGANVWCLDNDYHTPLDMAAMRSHMDCVRYLDSI
AAKQITLNPKLVSKLKDRAFRNAERRIKECSRLQHKHQQRMEKQFLREAAASDLSDSVSL
SSYSSTMSRKIPQFNTINSSITYSQGLHSTAKGRTKIQKRLDKKKQSDGTFKISEDGRKS
VRSLSGLQLGNDVMFLKQGTYAGPAQRPPNRLHVRNMFSPSPLPDYENDADTVSRVLSDP
GLYEAAYSEISEDSGRDSLFSRPGLGTLVFRRNYASEGLLGFGRDDSYSVAGSEPVGRVP
NVHLRGRLPPRSPSLDQGSTDSIASLQERNLQDLPWEEGDLGVEEEDEEDLQASSAPLEV
FLASQGLSELLSVFLCEQMDLDALLMCSEPDLTSIHIPLGPRKRLLEACSRRNYTLQRAR
PISDTEL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggatgatacctatcaccgggccgcgcgagacggccggctggacctgctgagacaggcc
acgcgccgggacctcaacagcccggatgaggacgggatgacccccacactgtgggcggcc
caccacggccacctggactccctcaggctggtgctggggaggggtggagaccctgatagg
tgtgatatctgggggaacactcctctccacctggctgccgccaacggccacctgaactgc
ctgacctacctggtgtcgttcggtgccaacgtgtggtgtctggacaacgactaccacacg
ccgctggacatggccgccatgaggagtcacatggactgcgttcggtacctggactccatc
gcggccaagcagatcaccctcaacccaaaactggtgagtaaactgaaggaccgggccttc
cggaacgccgagcgccgcattaaagagtgcagccggctgcagcacaaacaccagcagcgc
atggagaagcagttcctgagggaggcggccgcgtccgacctgtccgacagcgtcagtctg
tccagctacagcagcaccatgagccgcaagataccacagttcaacaccatcaactccagc
atcacctactcacaggggctgcactccacagcaaaaggcaggacgaagatccagaagcgc
ctggacaagaaaaagcagagcgacggcaccttcaagatatccgaggacgggcggaagagc
gtccggtccctgtccggcctccagctggggaacgatgtgatgttcctgaagcaggggacg
tacgccggccccgcccagcggcccccgaaccgcctccacgtccgcaacatgttctccccg
agcccgttacctgattacgagaacgacgcggacacagtgtctcgagtgctgagcgacccc
gggctttacgaggccgcgtactcggagatcagcgaggattctgggagggactctctgttc
tcccggccggggctgggaacgctggtgttccggaggaattacgccagcgagggtctgctg
gggttcggccgcgacgattcctacagcgtagcgggaagcgagccagtgggacgggtgcca
aacgtccatttacgaggccgtctaccccccagatcacccagcctggaccaggggagcact
gacagcatagcgagtctgcaggaacgcaacctgcaggacctgccgtgggaggagggtgat
ctgggtgtagaggaggaggatgaagaagatctgcaggcctcctcagctcctctggaggtg
ttcctggcctctcagggtctcagcgagctgctctcggtgttcctgtgtgagcagatggac
ctggacgccctgctgatgtgctcagaacccgacctgaccagcatccacatcccgctggga
ccccgcaagaggctgctggaggcctgcagccgccgcaactacaccctgcagagagccaga
cccatctccgacaccgagctgtga
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