Astyanax mexicanus (Mexican tetra): 103036849
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Entry
103036849 CDS
T05042
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03013
Nucleocytoplasmic transport
amex03015
mRNA surveillance pathway
amex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103036849 (rbm8a)
09122 Translation
03013 Nucleocytoplasmic transport
103036849 (rbm8a)
03015 mRNA surveillance pathway
103036849 (rbm8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103036849 (rbm8a)
03041 Spliceosome [BR:
amex03041
]
103036849 (rbm8a)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103036849 (rbm8a)
Spliceosome [BR:
amex03041
]
Complex C
Other components
EJC/TREX
103036849 (rbm8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
103036849
NCBI-ProteinID:
XP_007242211
Ensembl:
ENSAMXG00000040754
UniProt:
A0A8B9KU31
LinkDB
All DBs
Position
1:115224606..115230260
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AA seq
174 aa
AA seq
DB search
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGSEEGARSRVREDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRRSRSPDRRRR
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgctggatcttcatgaagcgggaggagaagactttcctatggatgaggat
ggtgatgagagcatccacaagctaaaggagaaggcaaagaagaggaagggtcgtggattt
ggatctgaggaaggagcgaggtcccgagtgagagaagactatgatacagtggaacaagat
ggtgatgagcctggcccacaaagatctgttgaaggatggatcctgtttgtgactggcgtt
catgaggaggcaacggaagaagatatccatgacaaattttctgaatttggagaaatcaag
aacctgcatctcaacttggacagaagaacgggttaccttaagggctacgcactggtggaa
tatgaaacgtacaaggaggcacaggctgccatggagggtctgaacggtcaagatcttatg
ggtcagccaatcagtgttgattggtgctttgttcggggaccaccaaagggcaagaggagg
ggtggaaggaggcgtagcagaagtccagacagaaggcgacgctga
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