KEGG   Astyanax mexicanus (Mexican tetra): 103036849
Entry
103036849         CDS       T05042                                 
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A
  KO
K12876  RNA-binding protein 8A
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03013  Nucleocytoplasmic transport
amex03015  mRNA surveillance pathway
amex03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103036849 (rbm8a)
  09122 Translation
   03013 Nucleocytoplasmic transport
    103036849 (rbm8a)
   03015 mRNA surveillance pathway
    103036849 (rbm8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amex03019]
    103036849 (rbm8a)
   03041 Spliceosome [BR:amex03041]
    103036849 (rbm8a)
Messenger RNA biogenesis [BR:amex03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     103036849 (rbm8a)
Spliceosome [BR:amex03041]
 Complex C
  Other components
   EJC/TREX
    103036849 (rbm8a)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 103036849
NCBI-ProteinID: XP_007242211
Ensembl: ENSAMXG00000040754
UniProt: A0A8B9KU31
LinkDB
Position
1:115224606..115230260
AA seq 174 aa
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGSEEGARSRVREDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRRSRSPDRRRR
NT seq 525 nt   +upstreamnt  +downstreamnt
atggcggacgtgctggatcttcatgaagcgggaggagaagactttcctatggatgaggat
ggtgatgagagcatccacaagctaaaggagaaggcaaagaagaggaagggtcgtggattt
ggatctgaggaaggagcgaggtcccgagtgagagaagactatgatacagtggaacaagat
ggtgatgagcctggcccacaaagatctgttgaaggatggatcctgtttgtgactggcgtt
catgaggaggcaacggaagaagatatccatgacaaattttctgaatttggagaaatcaag
aacctgcatctcaacttggacagaagaacgggttaccttaagggctacgcactggtggaa
tatgaaacgtacaaggaggcacaggctgccatggagggtctgaacggtcaagatcttatg
ggtcagccaatcagtgttgattggtgctttgttcggggaccaccaaagggcaagaggagg
ggtggaaggaggcgtagcagaagtccagacagaaggcgacgctga

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