Astyanax mexicanus (Mexican tetra): 103036881
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Entry
103036881 CDS
T05042
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
103036881 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103036881 (myo5b)
04131 Membrane trafficking [BR:
amex04131
]
103036881 (myo5b)
03029 Mitochondrial biogenesis [BR:
amex03029
]
103036881 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amex04812
]
103036881 (myo5b)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
103036881 (myo5b)
mRNA cycle factors
P-body specific factors
103036881 (myo5b)
Membrane trafficking [BR:
amex04131
]
Others
Actin-binding proteins
Myosins
103036881 (myo5b)
Mitochondrial biogenesis [BR:
amex03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
103036881 (myo5b)
Cytoskeleton proteins [BR:
amex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
103036881 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
NPHP3_N
AAA_16
AAA_22
nSTAND3
Ac76
Motif
Other DBs
NCBI-GeneID:
103036881
NCBI-ProteinID:
XP_049321994
Ensembl:
ENSAMXG00000003638
LinkDB
All DBs
Position
17:complement(6443781..6586333)
Genome browser
AA seq
1849 aa
AA seq
DB search
MTTVSDLYVKYTRVWIPDPEEVWKPAEIIKDYKEGDPILHLKLEDESTLEYAIGPKDNQL
PFLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLQIY
GEEVINAYSGQNMGDMNPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRY
FATVGGSANDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDRRFHIIGANM
RTYLLEKSRVVFQAEDERNYHIFYQLCASACLPEFKDLALTSAEDFTYTSFGENIFIEGV
NDAEDLEKTREALSLLGVKESHQMSIFKIIASILHLGNVEIVSERDGESCHINRDDSHLH
HFCQLLGVELEQMEHWLCHRKLVTTSETYVKNMSCAQATNARDALAKHIYAHLFDWIVEH
VNKALHTSSKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQEEYM
KEQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWTQKLYSQHLKSDHFE
KPRMSNTSFIVVHFADKVEYQCDGFLEKNRDTVYEEQINILKASKFQLVADLFQEGKEGP
APPPSGKSSRINVRPAKPAIKGHNREHRKTVGHQFRNSLHLLMETLNATTPHYVRCIKPN
DSKEAFVFDSRRAVQQLRACGVLETIRISAAGYPSRWTYLDFYSRYRVLMTKKDMTVGDK
KQVCRNLLESLIKDPDKFQFGKTKIFFRAGQVAYLEKLRADKFRFACIKIQKTVRGWLQR
RRYLKIRKSAITLQRYGRGYLARKHAEYLRLTKAALICQKQYRMVQVRRAYLTIRQAVIT
IQAFTRGMFTRRLYQEFLLHHKAIIIQRTVRGWLDRKKFLRARNAAIVIQCAYRRVLAKR
QLKQLKIEARSVKRIKELNIGMENKIVQLQRKMDDQSKEYKNQNEQLSVTNTALGTEVNK
LQKELETLRSRQGDNTQLTSMQEELEKLRAALQESHAQRKRLEEEYSSEKLGLEQRVEEL
EKENSMLKTEKEEMNQKIRRSTSSGGQEGSASQKEARLQAELDEERLRYQNLLKEFSRLE
QRYDNLQEEANYAKFAPGHRRNPSNQSSIGSESPFPSIAMSDVSETDGVIQQIDDMGPEN
AAMDLSVFMKLQKRVRDLEQERKRLQTNLEKMEELSQHKAIDPKNSTSEVDGNTDLAYNS
LKRQELESENKKLKNDLNELRKALVDRASESCSSNELQDSYNLLLSQLKAANEELDVRKE
EVLMLKTQIVSSSKATPDNTNHINSNNVSEWPNNKMPIDKEEALQAYQALSEAKSKSQDW
GYLNEDGELGLAYQGLKQVARLLETQLQSQSRKHQDELEALHTQIEVLKEDLEKKQETLN
HFSTLPPEALVEFSVQQEITRLTNENLDLKEVMEKLEKNERKLKKQLRIYIKKVQELEVS
QAVAAQSSRARPELTRQVTVQRKDKDFEGMLEYIKEDEALLIRTLVTDMKPHVVSATVPC
LPAYILFMCIRHADYINDDQKVHSMLTSTINAVKKVLKKNNDDFEMTSFWLANTSRLLHC
LKQYSGDEAFMTQNTSKQNEHCLKNFDLAEYRQVLSDLSIQIYQQLIKIAESILQPMIVS
AMLESGSLTGVKPMGYRNRSSSMDCETGGPGGYTLEALIRQLGQFNTIMGEHGLDPEIGQ
QVIRQLFYSINAVTLNNLLLRKDVCSWSTGMQLRYNISQMEEWLRGRNLHQSGVMATIEP
LIQAAQLLQVKKKTSQDAEAICTLCSALTTQQIVKILNLYTPLNEFEERVTVSFIRDIQN
RLQDRIENKQLLVDTKHTFPVLFPYTPSALSLETIHMPASLNLDFLVRV
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgtttctgatctttatgtgaagtacactcgggtttggatccccgacccagag
gaggtgtggaagcccgctgagattatcaaagactacaaagagggagatcctatcctgcac
ctcaaactagaagatgaatcgacattggaatatgcaattggtcccaaagacaatcaactc
ccctttcttcggaatcctgatattctggtgggagaaaatgacctcacggcactcagctat
ctgcatgaacctgccgtgctacacaacctcaaggtccgcttcctggagtccaaccacatt
tacacatactgtggaattgtcctggtggcaattaatccatatgagcagctgcagatctat
ggagaagaggtcatcaacgcctacagcggccagaatatgggggacatgaaccctcatata
tttgctgtggcagaagaggcatataaacagatggccagagatgagaagaatcagtcgatc
attgtgagcggagagtcgggagccggaaagaccgtcagcgctaaatacgccatgcgctac
ttcgccactgtaggaggatcagctaacgacacaaacgtagaggagaaagttctggcttcc
agtcctattatggaggctatcgggaatgcaaagaccacgcgtaacgacaacagcagccgc
tttgggaaatacatccaaatcggttttgacaggaggtttcacatcattggtgccaacatg
agaacgtatttgctggagaagtccagagtagtatttcaggctgaggacgagaggaactac
cacatcttctaccagctctgtgcttcagcctgcctaccggagttcaaagatctagctctg
accagtgcagaagacttcacctacacctcttttggcgagaacatcttcattgagggggta
aatgatgctgaggacttggagaagaccagagaagcactttctctgctgggtgttaaagag
agccatcagatgagcatctttaaaataattgcttccatcctgcatcttggaaatgtagaa
attgtctctgagagggatggagagtcctgccatatcaacagagatgactcccacctgcat
catttctgccaattgctgggggtggagctggagcagatggagcactggctctgccacaga
aagttggtcaccacgtccgagacctacgtgaagaacatgtcctgtgcccaggcgacgaat
gcccgcgacgctctggccaaacacatttacgcccatctctttgactggatcgtggagcac
gtcaataaagctttacacacctcctccaaacagcattcctttataggagtgctggacatt
tacggatttgaaacgtttgagattaacagcttcgagcagttctgcatcaactacgccaac
gagaaacttcagcagcagtttaactctcatgttttcaaactcgagcaggaggagtacatg
aaggagcagatcccgtggacactcatagacttttatgataatcagccttgcattgacctc
atcgaggccaagctcgggatcctggatctgctggatgaagagtgcaaggtacctaaaggg
acagatcagaactggactcagaagctttacagccagcacctgaagagtgatcactttgag
aagccaaggatgtccaatacctccttcatagtggtccactttgcagataaggttgagtat
cagtgtgatggcttcctggaaaagaacagagacactgtttatgaagagcagatcaacatc
ttgaaggccagcaagttccagctggtagcagatctcttccaggagggtaaagagggtcca
gctccacctccatctggaaaaagctccaggatcaacgtccgtcctgctaaacctgcgatc
aaaggccacaaccgtgaacaccgcaaaactgtaggccaccagtttcggaattccttgcat
cttttgatggagaccctcaacgctaccacccctcattacgtgcgctgcattaaacccaat
gacagcaaagaggcctttgtatttgattccagaagagccgtccagcaactgcgagcatgt
ggagttttggagaccatccgcatcagcgctgcaggatatccatccaggtggacatacttg
gatttctatagcagatatcgggtgctcatgaccaagaaagacatgactgtaggtgataag
aagcaagtgtgcagaaacctgctggagtccttgattaaggatccagataagttccagttt
gggaagacgaagatcttcttcagagcgggacaggtagcatacctggagaagctgagggca
gacaagttccgcttcgcttgtattaagatccagaaaacggtgcgaggatggctgcaaagg
aggcgctacctcaaaatccgcaagtctgccatcacgctgcagagatacggacgtggttac
ttggcacgcaaacatgcggagtacctgcgtctcactaaagcagccctcatctgtcagaag
cagtaccgcatggtgcaagtgcgacgtgcgtacctcactattcgccaggctgtgatcacc
atccaggccttcacccgggggatgttcacacggaggctttatcaggagttcctgctccac
cacaaagcaatcatcatccaaagaacagtacggggatggctggacaggaagaagttcctc
cgggcccgcaatgcggcaatcgtgatccagtgtgcctaccgccgcgtcctcgccaaacgc
cagctcaaacagctgaagatcgaggcccgctccgtcaaacgcatcaaagaactcaacatt
ggcatggagaataagattgtgcagcttcagagaaagatggatgaccagtctaaagagtat
aagaatcagaacgagcagctctctgtcaccaacactgctttgggcacagaggtcaacaag
ctgcaaaaagagctggagacccttcgcagccgccagggagacaacactcagctgacctcc
atgcaggaggagcttgagaagctgagggcggctcttcaggaatcccacgcccagaggaag
aggctagaagaggagtacagcagtgagaagcttgggctggagcagagagtggaggagttg
gagaaagagaactccatgctaaagacggagaaagaggaaatgaatcagaaaatccgccga
tccacaagctctggaggccaggagggcagcgcttctcaaaaggaagctcgtctgcaggct
gagctcgatgaagagagactacgctatcagaacctgctgaaggagttttccaggctggag
cagagatatgacaaccttcaggaggaggccaattacgccaagtttgctccaggccatcgg
aggaatccttccaaccagagcagtatcggctctgagtcccccttcccctccattgccatg
tctgacgtgagcgagactgatggggtcatccagcagatagacgatatgggcccagagaac
gctgccatggatctcagcgtcttcatgaagctgcaaaagcgagttcgagacctggagcag
gagaggaaaaggcttcagaccaacctggagaagatggaggagctgagccagcacaaagcg
attgatccaaagaactccacgtcagaggtggacgggaacacagatctggcctacaacagt
ctcaagaggcaggagctcgagtctgagaacaagaagctaaagaatgatcttaatgaactt
cggaaagccttggtcgaccgggcctctgagagctgctcgtccaatgaactgcaagacagc
tacaatctactgctcagccaacttaaagcagccaatgaagagctggatgtgcgcaaggag
gaggtgcttatgctgaaaactcagatcgtcagctcctcaaaagcaacaccagacaacacc
aatcacattaactccaacaatgtctcggaatggcccaacaacaaaatgcctatagacaag
gaagaagctctgcaggcataccaggcactcagtgaagcaaagagtaaatcacaggactgg
ggttatttgaatgaagatggggagcttggcctggcctatcaggggctaaagcaagttgcc
aggctgctggagacacagctccagtcccagtctcggaaacaccaggatgaactggaggct
ctacacacccagatcgaggtactgaaggaggacctggagaagaagcaggagactctgaat
cacttcagcactttacctccagaggctctagtggagttcagcgtgcagcaggagatcact
cgcctcaccaatgagaacctggatctcaaggaggtcatggagaagctggaaaagaatgag
aggaaactaaagaagcagctgaggatttacatcaagaaggttcaggagcttgaagtgtcc
caggctgtagccgcgcagagtagcagggccagacctgagctaacccggcaggtcacagtg
cagaggaaggataaggactttgagggcatgctggagtacatcaaagaggacgaggccctg
ctgatcagaactcttgttactgacatgaagccccatgttgtgtcagccacggtcccctgt
ctcccagcctacatcctgttcatgtgcatccgtcatgctgactacatcaacgacgaccag
aaagtgcactctatgctcacctcaacgatcaacgctgtcaagaaagttctcaaaaaaaac
aatgatgactttgagatgacttctttctggctggctaacactagtcgactcctgcactgt
ctgaagcaatacagcggagacgaggctttcatgactcagaacacatccaaacagaacgag
cactgcctgaagaactttgacctggcagagtaccggcaggtactgagtgatctgtccatc
cagatctaccagcagctcattaaaatagctgagtccattctgcagcccatgatcgtgtct
gcgatgctggagagtggaagtctgacaggagtgaagccaatgggctacaggaaccgttcc
tccagtatggactgtgagactggaggcccagggggatacaccctggaagctctgatcagg
cagctgggccagtttaacaccatcatgggggagcacggtttggacccagagattggtcag
caggtcatccgccagcttttctactcaatcaacgccgtcacactcaacaacttactgctg
cgcaaagacgtctgctcctggagcaccggcatgcagctcaggtacaacatcagtcagatg
gaggagtggttaagggggaggaacctacaccagagtggagtgatggccactatcgagccc
ctgatccaagcagcccagcttctgcaagtcaagaagaagacgtcccaggatgctgaggct
atctgcactctgtgctctgcactcaccacacaacagattgtgaagatcctcaatctttac
acccccctgaatgagtttgaggagcgggtcactgtgtcattcatcagagacatacagaac
cggctccaagacagaatagaaaacaaacagctcctggtggacaccaagcacacgttcccc
gtgctgttcccctacactccttcagccctgagtctggagaccatacacatgcctgcatca
ctcaacctggacttccttgtgcgagtctga
DBGET
integrated database retrieval system
