Astyanax mexicanus (Mexican tetra): 103037074
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Entry
103037074 CDS
T05042
Symbol
vps9d1
Name
(RefSeq) VPS9 domain-containing protein 1 isoform X1
Organism
amex
Astyanax mexicanus (Mexican tetra)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
MIT
DED
Motif
Other DBs
NCBI-GeneID:
103037074
NCBI-ProteinID:
XP_007250578
Ensembl:
ENSAMXG00000029363
UniProt:
A0A8B9L0N5
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Position
9:20355130..20382147
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AA seq
690 aa
AA seq
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MAAPANDSSLRPLQNAMRLVKVAIQLDTGNRHKDAYCEYLRSVNYISHALLQDAAFNAEG
EMEAVEVEKMVKLAEQCLERIKSCIGKRNDAPDPDPPASSLTQTYSNVPLFVPNPAQLVL
SNESAMESEAQSKSGSFLQLSRHRRVLSEGEGTGCPFLPPEVFQKLQIVESQDSKRELTP
IEEASRLNQKLKANYEARLARLAPSQAIQKTSLTLSLQRQMMENLIIARARQDALQRKME
ERRLRLQEQANRRFSSTGTITPEEQEQRVLYANILEYDQDHDWPKIWKTNLKKNPNDPTL
VSGLVTYLLSCPDHPVMKLLKKLQYQVYNRLYPIVSQYAPLSPVPGHSMSLKPSRSAQSL
LFSDSPKGRQKSGLVHSVSDASISLSLLHDLNATDTEPELESEEPPTPAPPDRENSFEDL
EQFLTQLDWTPGLGADETLSDVTCDSTYGDLDCHIQDLEERALKEHLKAIVKDIHNSIDR
LLSLCLLSFECLNTASSKDHCVACIEEVFFTPIWSPLLALFRRVHRERELAFEHSVQLYH
NASPGDVGVAAKLYPKDSALLHGSYPYESAVQELKLLCRDYCPQRKLECIVRTLRLICAC
AEHYRLLQGNDQSPKTAAIGADDLLPILSYVALRSEQPQLVSECAALEEFIHEGYLIGEE
GYCLTSMQSALTYVESLHLGGGLQQAAKLT
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcctgctaatgacagcagcctgagacccctccagaacgccatgcgactcgtt
aaagtggccattcagctggatacgggtaacagacataaggatgcatattgtgagtatttg
agaagtgtcaactacatctcacatgccctacttcaggatgcagcctttaatgctgaagga
gagatggaagcagtggaagtggagaagatggtgaagctagctgagcagtgtttagaaagg
atcaagtcctgcataggaaaaagaaatgatgcaccagatcctgaccctcctgcgtcctca
ctcacacagacctactctaatgttcctctttttgtaccaaatcctgcacaattagtgctg
tcaaatgaatcagcgatggagtcagaggcccaaagtaagtcaggctccttcctccaactg
tctagacatcgcagagtcctctcagaaggtgaagggacaggatgccccttcctgccccct
gaggtcttccagaagctacaaattgtggagtcacaagacagcaaaagggagttaacacct
attgaggaggcttcacgtctgaaccagaaactgaaggcaaattatgaggcacgtctggca
aggctggcacccagtcaggccatacaaaaaacttcactaaccctctctctgcagagacag
atgatggagaacctaatcattgccagagccagacaagatgctctccaaagaaagatggaa
gagaggagactccgactgcaagaacaagcaaacaggaggttttcatctactggaactata
acccctgaggaacaagagcaaagggttctctatgctaatatactggaatatgaccaagat
cacgattggcctaaaatttggaaaactaacctgaaaaagaacccaaacgatccaacgttg
gtttcaggccttgtcacctatctcctgagctgtcctgatcatccagttatgaagttgctg
aaaaagctccagtatcaagtgtacaacaggctgtatcccatagtcagccagtatgcaccc
ctcagcccagtgcctggtcactctatgtccttaaaaccctcccgcagtgcccagagcctg
cttttctcagacagccctaagggacggcaaaaatctggcctggtccacagtgtgtctgat
gcatccatctcactctcactgcttcacgacctcaatgccactgacacagaacccgagttg
gaatcagaggagcccccaactcctgcccctcctgatcgagaaaactcttttgaggatctg
gagcagtttctgactcagctggactggactccaggactcggtgctgatgaaacactctca
gacgtgacctgtgactcaacctatggggacttggactgtcacattcaggacctcgaggaa
cgagctctcaaggaacaccttaaagcaatagtcaaagatattcataattctatagatcgt
ctgttatctctgtgcctgttgtcctttgaatgtctcaacactgcaagttctaaagaccat
tgtgtggcctgcatagaggaggtcttctttacgccaatctggagccctcttctggcacta
tttaggagagtgcacagagagagagagctggcttttgagcacagcgttcagctttaccat
aatgcatcacctggtgatgttggtgttgcagccaaactgtaccctaaagactctgctctc
cttcatggttcctacccctacgagtcagcagtgcaggaactaaaattgctatgtagagac
tactgtccacaaagaaaactggaatgcattgtgagaacattaaggctcatctgtgcctgt
gcagagcactaccggctccttcaagggaacgatcagtcacccaaaactgcagccattgga
gctgatgacctgttgcccatcctctcctacgtggccctccgtagtgagcagcctcagctg
gtctctgagtgtgctgcgctggaagagttcatccatgaggggtatctaattggagaggag
gggtactgcctaacctcaatgcagagcgcactgacgtatgtggagtcacttcacttgggt
ggaggtttgcagcaggctgccaaactcacctga
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