Astyanax mexicanus (Mexican tetra): 103037117
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Entry
103037117 CDS
T05042
Symbol
igsf9a
Name
(RefSeq) protein turtle homolog A isoform X1
KO
K22655
immunoglobulin superfamily member 9
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amex04515
]
103037117 (igsf9a)
Cell adhesion molecules [BR:
amex04515
]
Immunoglobulin superfamily
IGSF9
103037117 (igsf9a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
fn3
C2-set_2
Ig_DSCAM-DSCAML_C
Ig_4
Ig_C17orf99
BSP_II
Motif
Other DBs
NCBI-GeneID:
103037117
NCBI-ProteinID:
XP_022541036
Ensembl:
ENSAMXG00000000273
LinkDB
All DBs
Position
20:complement(17704767..17773067)
Genome browser
AA seq
1693 aa
AA seq
DB search
MALKGLLPALILTAEVYLLGVAGGRGPSVLGKLGGSALLKCSLAPPAEGSSGSLHVVEWV
RQGHDIPVLIKFGSYAPRVHPNYEGRVSLSGGTALRVEGLVMEDEGWYECRILLLDKPSD
ETRNGSWTLLSVTAPPVFSETPSPVTEAYLGRSITLKCVARGNPPPTIRWYKDGILLKQT
DTVKVVNGSLSVGKVSRQTAGQYQCQASNSEGNATQTTKLRVRGPPVILIPPKDTVLNMS
QDALLQCQAEADPPNMTYVWTRDGENVYHIESLKSRVKVMVDGTLLISGLIPKDSGNYTC
MPTNGLPAPPTASARLTVQHPALVIQMPEETFLPTGMRAVISCPLAAEPPLLRVDWTKDG
QELDMGAYPGWTLTSEGSIIIATANDDAAGVYTCTPYNSYGTMGQSEPTTVILQDPPSLS
EPPRPEYRQEVGRTLLIPCQAEGDPPPKVTWTKMGSSFTRPQFSVSVNGSLVLQTLSKEH
YGRWECSVSNRVATVTASTTVSVLGTSPHTVSSVSVEVGVNQANVSWEPGFDGGFTQTFT
IWLKCTCSAGDQQEWQSVPGPSSGTSLLVDGLLPSTEYQFSVLAQNKLGSGPFSEISAAR
TLDALPVESRLQPPTLLSFNRSAEGVYLWWAAPSAPEPPIDSFILQSRLEAGQWLNLDED
IGVNQSEMLVLGLQKNSNYELRLLSRRGHQLSPPSRSINVSTSDSDPTSSRLLEFVPQPL
LAGVMGGMGFLCLALLLALATVCVIGHRRSQRRRKMMEDLPPDTCKSTSMKAGSIPDSPD
SILKQKLLPPRPLSGSTSFSSSDHSSLGRSSRSEYHSQRQQLLPRDPPRSSHNSLPESHL
HISSNSPTSPVEFIHRGPDGRFVVEPHDELCNSAPARHAIPRQDLQGHSSSGPEGATIRK
SQSLCYRDERRHPPFVLSVDMPACGSDIFRPSRGQAMTKHLSLRGYSCQEEELAIGMPQD
QSSLSSEGSSSVLYPESANCFGKMSLNRESTRSTASTLVLQMEHEREQGNLSRCLRLAQE
REELERELRKYNSLNRDTPVKYSKKGGSLRVERRRVDPEEEEEQEAGQVWTSRGSLGMGS
LHRKVLSTRGNSLPTASRGPGPGISRAASCIPWEARPPMIPIMSSNNMATIGFEHQRADS
ESLEHCHFSQMSNHPMSYHQRSKSLERREHQKSQTIDRRRRRRTLMEGHLDALDSEHGNP
TSEGPYSYYTADSSPRIPGTYSLHNQHLIVPNMNQSIDKQQERNAERLIGNVQVDCADSC
VEMSVDEPEEEEARTPLSVSRSTIDHSHDMLDYQRPSLHHLERRSRAEMEAGSRTIQRNS
SRTLQRNQRRDLEQLSSQSSRTLPSNRPPHYKALSVGSQRENHHKSTPSLDGKQYNKQQF
LTPDAWIDSLSLSQNLSLSLHTSSPSYPTHPNSEEVQDHQIRQIFPNQGNNSLVNSEIEL
QNSPVLRLQRFSPEESPDDSFFPDSQQHVISERHSPTTLPIVEDSNWSLSHHCHSLPEQA
SQRHVEQEEEEEEEKEEEEEEEDNRPEVDVEIQGYPSIPEPEGSCRSYASQSSGRGSLDH
PSSRQSLSLSPPLTSSPETTEESDRDDAAPRGTVLKECPRRDSVDESYEWDSHYASTLPA
DAKASAGRGGWKSGILSEGTLDEGGMKGLFPSAGLMGAVPVSVAPSCEESDLAWDILHGS
TCFPDPEQDGVLF
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atggcactgaagggacttctacctgcactcatacttactgcagaggtctacctactaggt
gtggccggtggtcgaggtccgtcagtgttggggaagctggggggttcagctttactgaag
tgcagtttggctcctccagctgaaggctcttctggatctctgcatgtggtggaatgggtt
cggcagggccacgacatcccggtcctcatcaaatttgggtcgtacgctcctcgagtacat
cccaactatgaaggtcgagtgtctctctctgggggaacagctctgagggtggagggtctg
gtgatggaggacgagggctggtatgagtgtcgtattctgctgctggacaaaccatccgat
gagactcggaatgggagctggacactgctttccgtcacagccccacctgtgttcagcgaa
accccgtcccctgtcacagaagcttacctgggaagatcaatcacactgaagtgtgtcgcc
cgcggcaacccccctcccactatcagatggtataaagatggaatcctgctgaaacagaca
gatactgtgaaggtcgtgaatggcagtctgtctgtgggtaaggtgagcagacagacagct
ggacagtatcagtgccaggcctcaaacagtgagggaaacgcgactcagaccaccaagcta
agagtcagagggcctcctgttatcctgatcccacctaaggacaccgtcctcaacatgtcc
caggatgctttgctgcagtgccaggcggaggcggaccctccgaacatgacatacgtgtgg
acgagagacggagagaacgtttaccatatagagtctttgaagtctcgtgtgaaggtgatg
gtggacggcactctgcttatatctggtctaatccccaaggattctgggaattacacctgt
atgcccactaacggtcttccagccccgcccactgcatccgccaggcttactgtgcagcac
cctgcgctggtgattcagatgcccgaggagacgttcctcccgacagggatgagggcagtg
atctcctgcccgctggcagctgaacctccactgctcagagtggactggaccaaagacggg
caggagctggatatgggggcgtacccgggctggactctgacctcagagggatccattatt
attgctacagctaatgatgatgcagctggtgtttatacctgtaccccttacaacagctac
gggaccatgggccagtctgagcccaccacagtcattctacaggaccccccgtctctgagt
gagccccctcgtccagagtacaggcaggaggtgggcaggaccctgctgatcccctgccaa
gctgaaggagaccctccacctaaagtcacctggaccaagatgggttcctccttcactcgt
cctcagttctcagtatcagtgaacggctctctggtgctgcagactctcagtaaggagcac
tatggtcggtgggagtgcagcgtttctaatcgtgtagccaccgtcaccgccagcaccacc
gtctcagttctgggcaccagtcctcacaccgtgtcctcggtgtcagttgaggtcggtgta
aaccaggccaacgtctcctgggagcctggatttgatggaggttttacacagaccttcacc
atctggcttaagtgtacatgctcagcaggggatcagcaggagtggcagtctgtccccggc
ccctcctcagggaccagccttctggtcgacggcctccttccgtccacagagtaccagttc
agcgttctggctcagaacaagctgggcagcggccctttcagcgaaatctccgctgccagg
accctggacgcgcttcctgtggagtccaggctccagcctcccacgctgctgtccttcaac
cggagcgccgaaggagtttatctgtggtgggcggcgccgtccgctcccgaaccgccgatc
gacagcttcatcctccagtcgcggctggaggcggggcagtggctgaacctggacgaggac
atcggcgtgaatcagagtgaaatgctggtgctggggttgcagaagaactcgaactatgag
ctgagactcctgtctcgccgaggacatcagctgagtccccccagccgctccatcaacgtg
tctacctcggactcggatccgactagttcccgcctcctggaattcgttccccagcctcta
ttggccggtgtaatgggtgggatgggcttcctatgcctcgcccttctattggctttggcc
acggtctgtgtgataggccacaggaggagccagagacgccgaaaaatgatggaggatctc
cctcctgacacgtgtaaaagcacatccatgaaagctggctcaattcctgacagccctgac
agtatcttgaaacagaagctccttccaccccgcccactctccggctccacctccttctcc
tcctcggaccactcttcccttggcaggtccagtcgcagcgaataccatagccagaggcaa
cagcttttacctcgtgatcccccacgttcttcccacaattccctacctgaaagtcatctc
cacatctcctctaactccccaacctcccctgtggagttcattcaccgtggcccagatggt
cgctttgtggttgaacctcacgacgagctttgcaattcggctccagcgagacatgcaatc
ccaaggcaagaccttcaaggtcattcatcaagtggcccggaaggtgccacgattcgcaaa
tcccagtcattgtgttacagagatgaaaggaggcatcctccgtttgtcttgtccgtggac
atgccagcttgtggatcagatatcttccgtcctagtagaggacaagcaatgactaaacat
ctttcacttcgtggatactcttgccaagaagaagagttggcaattgggatgccccaggat
caatcgagtctttcctcggaaggtagcagctctgtactctatccagagtcagccaactgt
tttgggaagatgtctttgaatcgagaaagcacacgttccaccgcaagtaccttggttctt
cagatggagcacgaaagggaacagggtaacctcagtcgctgtttaaggctcgcccaagaa
agagaagaactggagcgtgaattgcgcaaatacaacagcctcaatagggacactccagtc
aagtatagcaagaaaggtggatcgctcagagtggaacgaagaagggtggaccctgaggag
gaagaggaacaggaagctggacaagtctggacaagtaggggatcattgggaatgggatct
ttgcataggaaagtgttgtccaccagagggaactccttacctactgcttccagaggtcca
ggtccaggaatttccagagctgcctcttgtattccgtgggaagctagaccacctatgata
cctataatgtcttccaacaatatggcaacaataggttttgagcatcaaagagctgattca
gagtccttggagcattgtcacttcagccaaatgtcaaatcacccaatgtcatatcaccaa
aggtccaaaagcctagaaagaagggagcaccaaaaatcacagactatagatcgaaggcgg
cggaggcgaactttaatggaaggtcaccttgatgcccttgattctgaacacggaaaccct
acttcagaaggaccttattcctattatactgcagatagcagtccaagaattccaggaacc
tacagtctccacaatcaacacctaattgtgcccaacatgaatcaatccattgacaagcag
caagaaaggaatgcagagaggctcataggaaatgtgcaggttgattgtgccgattcttgt
gtggagatgtctgtggatgagccagaagaagaagaggctcgaactcccctttcagtttca
aggtccacaatagatcacagccacgacatgctggattatcaacgaccgagtttgcatcat
cttgaaagacggagtcgagcagaaatggaagcaggcagcagaactattcaaagaaacagc
agcagaactcttcaaagaaaccagagaagagaccttgagcaattgagcagccaatcgagc
agaaccttgccttccaataggcctcctcactacaaagctcttagcgtgggttcacaacga
gagaaccatcacaaaagtaccccgagtttagatggcaaacagtataacaagcaacagttt
ctcacacctgatgcctggattgactcgttaagcttgagtcaaaatttgtctctgtctctt
cacacctcttcaccttcatatcctacacatcccaactcagaggaggtacaggaccaccag
atacgccagatctttcccaaccaagggaacaattcacttgtgaattcagaaattgagctg
caaaactctccagttctccgtctccagaggttctcgcctgaagaatcccctgacgactct
tttttcccggattcccaacagcatgtcatctctgagcgtcacagtccaaccactttacca
atagtagaggactccaactggtccttgtctcaccactgccactctctgccagagcaagcc
agccaaagacatgtggagcaggaggaagaagaagaagaagaaaaagaagaagaagaggag
gaagaggacaataggcctgaggtggatgtggagatccaggggtacccaagcatcccagag
cccgagggaagctgcaggagctatgccagccagagcagtggcagggggagcctggatcat
cccagcagtaggcagtccctatctctcagccctccacttaccagctccccagagacgacg
gaggagagcgacagggacgacgcagccccgagagggacagtactaaaggaatgccccagg
agagactcggtggacgagagttacgagtgggactcgcactatgcgtccacgctccccgcg
gacgcgaaagcttcggccggcagaggcggatggaagtctggaatcctgagcgagggaacg
ctggacgaaggtgggatgaaaggtcttttcccctcggccggtttgatgggcgccgtgccg
gtgagtgttgccccgagctgtgaagagtctgacctggcttgggacatcctgcacggatcc
acgtgtttcccagacccagagcaggacggcgtgctattctga
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integrated database retrieval system
