KEGG   Astyanax mexicanus (Mexican tetra): 103037223
Entry
103037223         CDS       T05042                                 
Symbol
rab7b
Name
(RefSeq) ras-related protein Rab-7b
  KO
K07897  Ras-related protein Rab-7A
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04137  Mitophagy - animal
amex04140  Autophagy - animal
amex04144  Endocytosis
amex04145  Phagosome
amex04148  Efferocytosis
amex05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:amex00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103037223 (rab7b)
   04145 Phagosome
    103037223 (rab7b)
   04140 Autophagy - animal
    103037223 (rab7b)
   04137 Mitophagy - animal
    103037223 (rab7b)
   04148 Efferocytosis
    103037223 (rab7b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    103037223 (rab7b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amex04131]
    103037223 (rab7b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amex04147]
    103037223 (rab7b)
   04031 GTP-binding proteins [BR:amex04031]
    103037223 (rab7b)
Membrane trafficking [BR:amex04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    103037223 (rab7b)
Exosome [BR:amex04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103037223 (rab7b)
  Exosomal proteins of other body fluids (saliva and urine)
   103037223 (rab7b)
  Exosomal proteins of colorectal cancer cells
   103037223 (rab7b)
  Exosomal proteins of bladder cancer cells
   103037223 (rab7b)
GTP-binding proteins [BR:amex04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    103037223 (rab7b)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase Gtr1_RagA cobW ATP_bind_1 PduV-EutP nSTAND3 AAA_16 Septin AAA_7 NTPase_1 AAA_22 AAA_24 G-alpha ATPase_2 AAA_5 ATP-synt_ab ABC_tran SRPRB AAA_14 NACHT DAP3 MCM
Other DBs
NCBI-GeneID: 103037223
NCBI-ProteinID: XP_007235549
Ensembl: ENSAMXG00000031957
UniProt: A0A3B1JH45 A0A8T2LKJ1
LinkDB
Position
12:complement(26726319..26737265)
AA seq 205 aa
MASRKKVLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVDQAFQTIARNALKQESEV
EPYDFPDQIKLRDDRPASSSDGCSC
NT seq 618 nt   +upstreamnt  +downstreamnt
atggcctctcgcaaaaaggtgctgctgaaagtgatcatcctcggggactctggggttggg
aagacctctttgatgaaccagtatgttaataataagttcagcaaccagtacaaggccaca
atcggtgcagacttcctgaccaaagaggttatggtcgacgacaggcttgtcaccatgcag
atttgggacacagcagggcaggagcgtttccagtctctgggagtggcgttctacagggga
gcagactgctgtgtgctggtgtacgacgtcacagccccgaacacgttcaagactctggac
agctggagggatgagtttctgatccaggccagccctcgcgaccctgagaacttccccttt
gtggtgcttggaaataagattgacttggagaacagacaggttacaacaaagcgagctcag
gcttggtgtcaaagcaagaacaatattccctattttgagaccagtgccaaagaagcaatc
aacgtggaccaggctttccagaccattgctcgcaatgcactcaaacaggagtctgaagtg
gagccatacgatttccccgaccagatcaaactacgagatgatagacccgcctcctccagc
gacggctgcagctgctga

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