Astyanax mexicanus (Mexican tetra): 103037248
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Entry
103037248 CDS
T05042
Symbol
gtf3c2
Name
(RefSeq) general transcription factor 3C polypeptide 2 isoform X1
KO
K15200
general transcription factor 3C polypeptide 2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103037248 (gtf3c2)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
103037248 (gtf3c2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_DCAF12
WD40_WDHD1_1st
Beta-prop_VPS8
Beta-prop_TEP1_2nd
WD40_Prp19
DSE1_N
ASA1
MIOS_WD40
Beta-prop_WDR3_2nd
Motif
Other DBs
NCBI-GeneID:
103037248
NCBI-ProteinID:
XP_049336386
LinkDB
All DBs
Position
1:complement(56746679..56802581)
Genome browser
AA seq
906 aa
AA seq
DB search
MADSAPEEGRPTAEFMGLPSEKHGGAELCNQRAADRNPNGDALVLHNGEPQTLEADSSEI
NRSLESTESNRTTSSVGKSQQVILEVNSSQHPSNDDQAALPIENQKRKRGRPRKTEGCVR
KNSRNHSASDVKPTRVARSKTQEKTMLKFVSEHFQQNPPPSDISAIPETPEMTPGGRPKR
KAAKAALEYLHSITKDLELSEKPSGKKERDGPVLLTRPAQRKALGSERGLERKAQDFYRD
QFDDADFDPEGHEDEESEEDEGDEEYEDPMLDFVNKKTSYKHKLSGCNGLSSSTMQPLWE
SFRSTIKFRQEHCSSWIFPEWIPSVSDWHLLSTSEVEKYLPEEEHSAAFKLSREGIKEQH
SLHRMKRFGSLPPHMERWDSLFFVGGPVWAMEWCPCPEGAAETQYVALSCNRGMDDRHKI
NMLYTEHALLQLWDLGRLQVSRPSSSPSLAYALALDDGCIWDLKWCPAGAWELPSTSRKE
PHLPRLGLIAVAFSNGTIAVFSLPHPEALKAQTPIIAGEAAQGSLIYQVGRILTVKLGSS
QMDHNGQSGQCFALDWLPVKPHNILVAGFYDGTVALWDLSTKSSLQKVRSPEKSLLLYPY
HSFLAHDHTVRSLRWCGASSELLVTVGDDRMVKLWNVTNTCNPLKSIKRFLPTEVSWPTF
WSGIFITQECCFSALGQQGLHYLDSGYFGHKPFFVCTRKSTVWSFSMSDWMNSCVLGDNM
GDCVCSLLCDPDCNYSNTRRHRFPVYRTEMAQFRPGQRLDQSEEEEMEEVGITPQREPQN
YRAATKTYYLHFHDMDLRSFTKYQDKPLMKQLHTSETKGLVFADQMPLNALYKVRFSPNM
DAHCWVLSAGQSGLVRAHCVRGLSGPSMHKLVCETQEQFTAMFRTQETIADATAIRHFTA
DTVQVR
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggcagattctgccccagaggagggcagacctacagcagagttcatggggctcccctca
gaaaagcacggaggagctgagctgtgtaatcagagagctgcggatcgcaacccgaatgga
gatgctttagttctgcataacggagaacctcagactctagaggcagactcgtctgaaatc
aacagaagtctagagtctacagagtctaacaggaccacttcttcagtgggaaaaagccag
caagtcatcttggaagtgaacagttctcagcatccctcaaatgatgaccaagcagcttta
cccatagagaaccaaaagcgcaaaaggggacgtccacgaaaaacagaaggatgcgtcaga
aagaactcaaggaaccattcggcttctgacgttaaaccaacaagagtagccagaagcaag
actcaagaaaaaacgatgctgaagtttgtctctgaacattttcagcagaatcctccacca
tctgacatctctgccatcccagaaactcctgagatgacaccaggtggacgcccaaagagg
aaagctgccaaagctgctctggagtacctccacagtatcacgaaggaccttgaacttagt
gaaaaaccatcaggaaagaaggaacgagacggccctgtcctgctgacccgtccagcccag
agaaaagctttaggaagcgaaaggggactggaaaggaaagcccaagatttttacagggac
cagtttgacgatgctgactttgacccagagggccatgaagacgaggaaagtgaagaagac
gaaggtgacgaggagtatgaagatccaatgttagactttgtgaataaaaagacatcatat
aaacataaactttctggatgtaatggactgtccagctctaccatgcagcctctgtgggag
tcctttagaagcaccataaaatttcgtcaagaacattgctcctcctggatatttcctgag
tggatcccttcagttagtgactggcatctactgtctaccagtgaggtggaaaaatattta
cctgaggaggaacattcagcagcttttaaattgtctcgcgagggaatcaaagaacaacat
tctctgcacaggatgaaaagatttggatcattgcctcctcatatggaaaggtgggactct
ctgttctttgttggaggccctgtttgggccatggagtggtgtccttgtcctgaaggtgct
gcagaaacacagtatgttgcgctctcctgcaatagaggcatggatgaccgtcacaaaata
aatatgctctacaccgagcatgctctgctccaactgtgggacctgggcaggctacaagta
agtagaccgtcatcttctcctagcctggcctacgccttggcgctggatgatggctgcatt
tgggacttgaagtggtgtccagcaggggcctgggaactgcctagtactagcaggaaggaa
ccacacttgcctcgactaggacttatagctgtagctttttctaacggaactattgctgta
tttagtctaccgcacccagaagcccttaaggcccaaactccaattatagcaggggaagcc
gctcaggggtcactgatataccaggtgggacgcatcttgactgtaaagctcggctccagc
caaatggaccacaatggtcagagtgggcagtgttttgcccttgattggctccctgtcaag
ccacacaacattctggttgctggcttctatgatggtacagtagctctttgggatctgagc
actaagtcatcattgcagaaagtcaggtctccagaaaaatccctccttctctacccatac
cactcatttctcgctcatgaccacactgttcgctccctcaggtggtgtggggcttcaagt
gaattgttagtgacagtgggagatgaccgcatggttaagctctggaacgtaactaacaca
tgcaatcccctgaagtcaataaagcgcttcttgcccactgaggtgtcctggccaactttt
tggtcaggtattttcataactcaggagtgttgcttttctgcacttggacagcaaggactt
cattacctggactctggttactttggacataagcctttctttgtgtgcacaagaaaatcc
acagtatggagtttttctatgtctgactggatgaactcctgtgtattgggggacaacatg
ggggactgtgtgtgctctctgctgtgtgatccagactgcaactacagcaacactagaaga
catagatttccagtgtacagaacagagatggctcagttcagacctggccagaggctcgac
cagtctgaggaggaggagatggaggaagtgggaattactccccagagggaaccgcagaac
tacagagcagccacaaaaacatactacctccacttccatgacatggaccttaggtctttt
acaaaataccaggacaagcctcttatgaagcagttgcacacctctgagactaaaggcctc
gtctttgcggaccagatgcctctaaatgcactctacaaggtgcgcttcagcccgaacatg
gatgctcactgctgggtgctgtcagcgggccagtcaggtctggtgcgcgcccactgtgtg
agaggactaagtggccctagcatgcacaagcttgtctgtgagacccaagagcagttcaca
gccatgttccgcactcaagaaactattgccgatgctactgctattcgccacttcacagca
gacactgttcaagtaagatga
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