Astyanax mexicanus (Mexican tetra): 103037331
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Entry
103037331 CDS
T05042
Symbol
rsf1a
Name
(RefSeq) remodeling and spacing factor 1
KO
K11657
remodeling and spacing factor 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103037331 (rsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103037331 (rsf1a)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
103037331 (rsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
WSD
HCMV_UL139
DDT
Motif
Other DBs
NCBI-GeneID:
103037331
NCBI-ProteinID:
XP_022521688
Ensembl:
ENSAMXG00000013740
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All DBs
Position
9:complement(5329567..5350549)
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AA seq
1380 aa
AA seq
DB search
MAAPAAAPALAPALCPSFAVVCSFLERYGAALDLPELSFPEMERFLRDRSAVPQPLVELH
VKLLRKLGKTVSSERWEKYLVKVCQEFNSTWAWELESKGYPEMPMECKADILKYLCECQF
DDNVKFKTAVNEEDPDQMRLQPIGRDKEGLLYWFQLDQDQNVRVYVEEQDDLDGSSWKCI
VRNRNDLADILEALKGKMDPPMTDQEQQDGSSGNPTEQEKETTEKICSSDNIKDKKRAGQ
ADCSDSEEDSKQITMKKEEESLSINENIKKATVPLIKLKEERKDELKVKPVVTEKPPTLE
HPLVIDNRVSTIKSLVKDEPRDSPRHWNAISVVKSPGSLKQELPTKTEAFRDKKAEDVER
AIKNDQQAKIPLKKRELKRSDSYDSNHYSNINHNNNNVSNNGSVSLGGIIVRNPAVLALS
DQQAGRNMELGGENKTLMPMAPCIGTGNLLKPSSEPATREHYVGIGVIMGPVERNRAFDQ
PENLTTPTKDRNGLHGDGKIKFKAEMTPAENIRQSVLVRKPSLTPENSSIHHSSISESKI
HKIEQADCEDSAPGKVSVGDSDEPLNFAMPKVSETAVNEVKSVIKVIPIEQSSPKAVATL
EEAVTSSTCGNIEEEEEEEEEEEELTEKKKPKMTEQTPQSGQVEAMQENKGKGYKSSRKR
RSEKTKVKMQPGEAPNKLRCEGTTNNDDEEVSSELQKEGIRLKIKIPLHRRTPKLQLERA
RDDLQASDRRSLRRSARICRPSPKLAEIQVRKRGKKQATPPAAREVEEHKDDEAEKTLPK
RDVATNQGPIKSARGKRRHRRARWSKTKLKKPCRVEVAPQEDVVPENKPEGAEEKSESES
EPSEEAPPEDACKHCSLPNHPELILLCDLCDSGYHTACLRPPLMIIPDGEWFCPPCQHKL
LCEKLEEQLLNLDTALKKRERAERRRERLVYVGISVENIIPNPDAEVEDKKQEKKKDAKK
SKNLERRSTRQRKSISYRFDDFDEAIDEAIEEDIQNSEEGGPVGGRGKDMANITGQKEKE
VDKENRRPVKPAAPRRRKRRRRLNDLDSDSTLEDEESEDEFHLSDSMEEEDFVVSGDDAA
SDGDAASWDGSDWGSVTSRPGRLPLPKKTARNIRNQQVKKTTRKSTRRQKGSSEEEELLE
TEEEEEMETEGSSDFDDSDVDMRRRRSRRQNAQVNYCETSESEGSHKISKQKTAQPRRRR
LSSSNTSAVSKDSEPEEESERRPRGRKRESTREDSKQRHKPLTLKRPRSSSEEQEGEETG
EEGESESDEEERPVRKRLNRIETDEEEEEEEVERRPMRNAHGKRRSGAKDFSQLPARAPP
RGSEGLLPKHTGRHGGTPHGRHNGLVPPRPTAQDEDEEEEDDLTAVTDLVNFVFDSEQLS
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccggccgctgcgccggctcttgcgccggctctgtgcccgagcttcgccgtg
gtgtgctcgttcctggagcgctacggagccgcgctggacctgcccgagctctccttcccg
gagatggagcggttcctgcgggacagatctgcagttccacaacctcttgtcgagctccat
gtcaaactgctacgcaaactgggcaagacagtgtcttcagagagatgggaaaagtatctg
gtcaaggtgtgtcaggagtttaacagtacctgggcctgggagctagagagtaaaggctac
cctgagatgcccatggagtgcaaagctgatatccttaagtatttatgtgaatgccagttt
gatgacaacgtcaagtttaagacagcagtcaacgaggaagatccagaccagatgcgcttg
cagcctattggtagagataaggaagggctgttgtactggttccagttggatcaagatcag
aacgtgcgggtttatgtggaggagcaggatgatttggatggttcttcttggaagtgcatt
gtcaggaataggaatgacctggcagatattttggaggcacttaaaggcaagatggaccca
ccaatgacagaccaggagcaacaagatggttcttctggtaatccaacagaacaggagaag
gagacgacagagaagatctgttccagtgataacatcaaagacaagaagagagctggccaa
gcagactgttcagattctgaagaggacagcaaacagataaccatgaagaaagaagaagaa
agcctgtcaataaatgaaaatattaaaaaggcgactgttcctcttattaaactaaaagaa
gagcgaaaggatgagcttaaagtgaagcctgttgtaaccgaaaagccacctacattagag
catcctcttgttatagataatagagttagcaccattaagagcctggtgaaggatgagccc
agggactctccgagacactggaacgctatctccgttgtgaagtctccgggctctctgaag
caggaacttccaacaaagactgaggctttcagggacaagaaagctgaggacgtggagagg
gctataaaaaatgaccagcaggcgaagatacctctgaaaaagagggagctgaagaggagc
gacagttacgacagcaaccattacagcaacataaaccacaataataataacgttagcaac
aacgggagcgttagccttgggggtataatcgttcgtaatccagcggttttggcactaagt
gatcagcaggctgggcgtaacatggaacttggtggcgaaaataagactttaatgcctatg
gctccttgtataggtacgggaaacctgcttaaaccaagttctgaaccagctacgagagag
cattacgtaggtattggagtaattatgggcccggttgagagaaatagagcgtttgaccag
cctgagaatttgaccactcctacaaaggaccgaaacggccttcacggagatggtaagatc
aagtttaaagctgagatgacaccggctgagaatataagacagtctgttctagtaagaaaa
cctagtcttacacctgaaaattccagtattcatcattccagcatcagtgaatctaaaatt
cataaaatagagcaagccgattgtgaggattcagctcccggaaaggtttctgtaggtgat
tcggatgaacctttgaattttgcaatgccaaaagttagcgaaacagccgttaatgaggtg
aaatctgtgataaaagttattccaattgagcaaagctcacctaaagcagtggccacactt
gaagaagcggtcacgtcatccacatgtggaaatatagaagaagaagaagaagaagaagaa
gaggaggaggagctaacggaaaagaaaaagcctaaaatgacagagcaaacgccgcaaagt
ggacaagtggaagctatgcaagaaaacaaaggcaaaggatacaaaagctcaaggaaacga
agatcagagaagacaaaggtcaaaatgcaaccaggagaagctccgaataagcttcgctgt
gaaggtacgacaaataacgacgatgaagaagtgtcgtcagagttacaaaaagagggaatt
cgcctaaaaatcaagatcccgctgcacagacgcacgcccaagctccagctggaaagagcc
agggacgacctgcaggcctcagaccggcgttcactccggaggtcagcgagaatctgcagg
cccagtccaaaactggccgaaattcaggtcaggaagcgcgggaagaagcaggcgacgccc
cctgcagcacgcgaggtcgaagagcacaaagatgatgaagcagagaaaacgcttcctaag
agggacgttgcaaccaaccagggtccgatcaagtctgcaaggggtaagcggcggcaccgg
cgagctcgctggtcaaaaaccaaactgaaaaagccatgcagagtggaagtggctccacag
gaagatgtggtgccggagaataaaccggagggagcggaggagaaaagcgagtcagagtcc
gagccctcggaagaagctccgcccgaagacgcctgtaaacactgcagcctcccgaaccat
cctgaactgattttgctgtgtgacctgtgtgacagtggataccacacggcctgtctgagg
cctcctcttatgatcatccctgatggagaatggttctgtcctccctgtcagcataagctg
ctgtgtgagaagctggaagagcagctgctgaatctggatacagcgctgaagaaacgtgaa
cgagctgagaggaggcgagagcgtctggtgtatgtgggcatcagtgtggagaatattata
cccaatcctgatgctgaagttgaggataaaaagcaggagaagaagaaagatgcaaagaag
agtaaaaacctggagaggagatccacacggcagagaaagtctattagctacaggtttgat
gactttgacgaagccattgatgaagcaatagaggaggacatacagaactcagaggaagga
ggtcctgtggggggtcgtggtaaagatatggccaacatcacgggccagaaggagaaggaa
gtggataaagagaaccggaggcctgtgaaacctgctgcccctcgcaggaggaaacgccgc
cggcgactcaacgacctggacagcgacagcactctggaggacgaggagagcgaggatgag
tttcacctgagtgacagtatggaggaggaagattttgtggtgtcgggtgacgatgcagcg
agtgatggggacgctgcctcttgggacgggagcgactggggcagcgtcacgagcagacct
ggccgtctacccctccccaaaaaaacagcccgaaacattcgaaaccagcaagtcaagaaa
accacacggaaatccaccagacgacagaaaggatcttcagaggaggaggagcttttagaa
acggaggaggaggaggagatggaaaccgagggctccagcgacttcgacgacagtgatgtg
gacatgaggagacggaggtcacggcgacagaacgcacaggttaactactgcgaaacctcc
gagtctgaggggtcacacaaaatctccaaacagaaaactgcccaaccacgccgcagacga
ctgtccagctccaatacgtcggctgtttccaaggactctgaaccagaggaggagtctgag
aggaggccgagggggaggaaacgggagtcgaccagagaagactccaaacagaggcacaaa
ccgctaaccctgaaacgaccccggagttcaagcgaggaacaggagggggaggaaacgggc
gaggaaggagagagcgaatcggacgaggaagagcggccggtacgaaagaggctgaaccgc
atcgagacagacgaggaagaggaggaggaagaggtggagcgaaggccgatgagaaacgca
cacggaaaacgaaggagtggagctaaagacttcagccagctgcctgctagggcgccccct
agaggatcggagggtttattgccaaagcacacgggccgacacggcgggactcctcacgga
aggcacaacggcctggttcctccgaggcctacagctcaggatgaagacgaggaggaggag
gatgacctcacggccgttacggaccttgttaactttgtttttgacagtgaacagttgtcg
tga
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