KEGG   Astyanax mexicanus (Mexican tetra): 103037341
Entry
103037341         CDS       T05042                                 
Symbol
chad
Name
(RefSeq) chondroadherin
  KO
K06248  chondroadherin
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04510  Focal adhesion
amex04512  ECM-receptor interaction
amex04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:amex00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103037341 (chad)
   04518 Integrin signaling
    103037341 (chad)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103037341 (chad)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:amex00535]
    103037341 (chad)
Proteoglycans [BR:amex00535]
 Extracellular matrix (ECM) proteoglycans
  Small leucine-rich proteoglycan (SLRP) family
   class IV
    103037341 (chad)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_1 LRR_5 LRRNT LRR_9 A-2_8-polyST LRRCT LRR_NXF2 LRR_NXF1-5
Other DBs
NCBI-GeneID: 103037341
NCBI-ProteinID: XP_007259398
Ensembl: ENSAMXG00000040550
UniProt: A0A3B1ISY7
LinkDB
Position
15:complement(33645878..33653946)
AA seq 363 aa
MKVGRFQLVFCIHVFASFVIGIQSQCPSPCHCHGDLQHVICDNVGLKKIPRISEATRLLN
LQRNNLGMLTTGGFSDMKGLISLHLQHCQIREVASQAFKGLKKLIYLYLSNNEISTIKSG
AFEDLSELTYLYLDGNRISGLSKGIFSPMINLFILQLDNNKIRELQPGTFTGANDLRWLH
MSHNELSAMQPGSLDEVENLAILTLDQNKLSTYPIQAMSKLRVVEELNLSKNPLSFIPDH
AFRSFGRYMEKLHLNDMGLEKFSTAAFEGVTALKSLHLENNKLKNLPNSLAFTNIQNLTL
FNNPWSCTCQLANLKKWMDSSRIHPDAVCASPPSQKGKQIKDTSAFSRCKAKQKKRAKKG
TRH
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgaaggttgggagattccagttggtgttctgtatacatgtttttgcctcgtttgtaata
ggtatacaaagccagtgcccaagtccatgtcactgtcatggtgaccttcagcacgttatc
tgcgacaacgttggcctgaagaagattcctcgcatctctgaagccactcgtctgctcaac
ctgcagcgcaacaacctgggcatgctcaccactggaggcttcagcgacatgaaggggctc
atctccctgcatctccaacactgccaaatccgagaggtcgccagccaggcctttaaaggt
ctcaagaagctcatttacctttatctgtctaacaacgaaatcagcaccattaaatctgga
gcttttgaggacctaagtgaactcacctatctttacctggacggaaatcgcatctcaggc
ctttccaagggcatcttttccccaatgattaacttgttcattctgcagcttgataacaac
aaaatccgtgaactgcaaccaggcaccttcacaggtgcaaacgacctccgctggctgcac
atgagtcacaacgagctgagtgcaatgcagcccggctcacttgatgaagtggagaacttg
gccattcttaccttggaccaaaacaagctttctacctatcccatccaggccatgagcaag
ctgcgtgtagttgaggagcttaatttgtcaaagaacccacttagcttcatccctgatcac
gcatttcggagcttcggtcgctacatggagaagctgcatctcaatgatatgggtctagag
aagttctccactgctgcttttgaaggcgtgactgctctaaagtctctgcatcttgagaac
aacaagttgaagaatctaccaaacagtttggccttcaccaacatccagaatctcaccctg
ttcaacaacccatggagctgcacctgccagttagcaaaccttaaaaaatggatggactcc
agtcgtattcaccctgatgcagtttgtgcatctcctccaagtcagaaaggcaaacagata
aaagacacttctgccttcagtcggtgcaaagcaaagcaaaagaagagagccaagaaggga
acacgccattga

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