Astyanax mexicanus (Mexican tetra): 103037416
Help
Entry
103037416 CDS
T05042
Symbol
tbc1d9
Name
(RefSeq) TBC1 domain family member 9
KO
K19951
TBC1 domain family member 8/9
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103037416 (tbc1d9)
Membrane trafficking [BR:
amex04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
103037416 (tbc1d9)
Endosome - Golgi transport
Rab GTPases and associated proteins
103037416 (tbc1d9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
CCDC93_CC
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
103037416
NCBI-ProteinID:
XP_049337101
Ensembl:
ENSAMXG00000005620
LinkDB
All DBs
Position
7:complement(47953009..48020722)
Genome browser
AA seq
1286 aa
AA seq
DB search
MWVNPEEVLLAGALWMTERANPYFILQKRKGHGDGGGGLAGLLVGTLDVVLDSSARVAPY
RILYQTPDSLIYWTIAHGSSRREITEHWEWLEHNLLQTLSIFENENDITTFVKGKIQGII
AEYNKNHDIKEDDDTEKFKEAITKFRKLFGMPEEEKLVNYYSCSYWKGKVPRQGWLYLSI
NHLCFYSYLLGKEVKLVVRWADITQLEKNATLLLPDMVRVSTRCSEHVFSVFLNVNETFK
LMEQLANIAMRQLLDNKGFEQDRSLPKLKKKSPKKVSALKRDLDARAKSERYRALFRLPK
DEKLDGHTDCTLWTPFNKMHILGQMFVSTNYICFTSKEETICSLIIPLREVTIVEKADSS
NVLPSPLSISTKNRMTFLFANLKDRDFLVQRISDFLQQTSSKIYFEREITGSLNSSDDEV
YSQQGSLLSCSPQRSSLGSEGESERQFNLNDNSVPTATQALMTMYRQRSPEEFNPKLAKE
FLKEQAWKNHFTEYGQGVCMYRTDKTKELVLKGIPENMRGELWLLFSGAINEMATHPGYY
EDLVEKSMGKYNLATEEIERDLHRSLPEHPAFQNEMGIAALRRVLTAYAFRNPNIGYCQA
MNIVTSVLLLYAKEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELARVYVPQLYD
CMQELGVISTISLSWFLTLFLSVMPFESAVVVVDCFFYEGIKLIFQLALSVLDANIHQLL
NCKDDGEAMTVLGRYLDSVTNKDSTLPPIPHLHSLLTDDGEPHPEVDIFKLVRSSYEKFG
FIRADVIEQMRFKQRLRVIQTIEDTTKRNVVRTIITETSFTIDELEELYSLFKAEHLTSC
YWGGTSNPMDRHDPSLPYLEQYRMDLEQFKSLFTVLFSWASGTHTDSLAMRFFRLLDQNT
DALINFREFITGLGVLCHGDLTEKLKLLYKMHILPELHHEQDEPDSAFEATQYFFEDITP
ETSHGLDHKSKNDKDDGFVRVTFKNEKVKKMHTPDYRTYLRLWNQETKSKPENMKNLPKL
NQGQFIELCKTLYNMFSEDPNEQELYHATATVTSLLLEMGEVGKLFCSPSSKEEEDDDED
DEEEEERPPVNRRKQQRIRGDSFQSSTEETRGKLSSTGSGGAAEGELNSTCITGPMEDIK
LEDSSPKDNGTSSAMLISDDETKDDTSMSSYSVLSAGSHEMDDKLQCEDIAEDTVLVRNS
EPHGGAGPRGGSGPHGAGGLPHSASIDKDWAITFEQFLASVLTEQALVQYFEKPVDIAAR
ITNGKNVRKVGQAHLSVSDYEISISG
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgaacccggaggaggtgctgctggccggcgcgctgtggatgaccgagcgggcc
aacccgtacttcatcctgcagaagcggaaaggacacggggacggcggcggagggctggcc
ggtttgctggtaggaactctggacgtggtgctggactccagtgcccgtgtggccccatat
aggatcctttaccagactccagactcgctgatctactggaccatcgctcatgggagttct
cgcagagagatcaccgaacactgggagtggctggagcacaacctgctgcagactctgtcc
atcttcgaaaacgagaacgacattaccactttcgtcaagggcaagattcagggaattatt
gcagagtacaacaaaaaccatgacattaaagaagacgacgatacagaaaagttcaaggag
gccatcactaagttcaggaagctgttcgggatgccggaggaggagaagctggtgaactat
tactcctgcagttactggaaggggaaggtgcccaggcagggctggctctacctaagcatc
aaccacctctgcttctactcctacctgctgggcaaggaggtcaagctggtggtccgctgg
gcagacatcacacagctggagaagaatgccactctgctgctacccgatatggtgcgggtt
agcacgcggtgcagcgagcacgtcttctccgtcttcctcaatgttaacgagaccttcaag
ctcatggagcagctggccaacatcgccatgagacagctactggacaacaagggcttcgag
caggaccgctcgctgcccaaactcaagaagaagtcgcccaagaaagtgtcggccctcaag
agagatctggacgccagggctaaaagcgagcgttaccgggcgctcttccgccttcccaaa
gacgagaagctggacggccacacggactgcacgctgtggactccctttaataagatgcac
atcctcggccaaatgttcgtctccaccaactacatctgcttcaccagtaaagaggaaacc
atctgcagcctcatcatccccctcagagaggtgaccatcgtagagaaagcagacagctcc
aacgtcctgcctagccccctgtccatcagcaccaagaacagaatgaccttcctgtttgcc
aacctgaaggatcgagacttcctggtgcagagaatctccgacttcctgcagcagacctcc
tccaagatctacttcgagagggagatcacaggcagcctcaacagctctgatgatgaggtg
tactcccagcagggcagtctgctctcctgcagtcctcagcgcagcagtctgggctcggag
ggcgagagcgagcgccagttcaacctcaacgacaacagcgttcccacggcaacacaagcc
ctcatgaccatgtaccgccagcgctcacccgaggagttcaaccccaaactggctaaggag
tttctgaaggagcaggcctggaagaatcacttcactgagtacgggcagggagtgtgtatg
tatcgcacagataagaccaaagagctggtgctcaaaggcatccctgagaacatgagagga
gagctgtggctgctgttctctggggcgattaatgagatggccactcacccgggttattat
gaggatttggtggagaagtccatggggaagtataatttggctacagaggagatagagcgg
gatcttcaccgctcgctcccggagcatccggcctttcagaacgagatgggcatcgctgcc
ctcaggagagttctgaccgcctacgccttccgcaaccccaacatcggatactgccaggcg
atgaacatcgtgacgtcagttttgctgctctatgctaaagaggaggaggcgttctggctg
ctggtggctctgtgtgaaaggatgctgccggactactacaacaccagagtcgtcggagca
ttagtagatcagggcgtgtttgaggagctggcccgtgtctacgttcctcagctgtacgac
tgcatgcaggagctgggcgtgatctccaccatctctctgtcctggttcctcacgctcttc
ctgtcagtcatgccctttgaaagcgccgtggtggtggtggactgcttcttctacgagggc
atcaaactcatcttccagctggcactgtccgtcctggacgccaatattcatcagctgctc
aactgcaaggatgatggagaggccatgactgtgctgggcaggtatttggacagtgtgacc
aataaggacagcacccttccaccaatcccacacctccactccctcctcacagacgatgga
gagcctcaccctgaggtggacatcttcaaactggtccgcagctcctatgagaaatttggc
ttcattcgagcagatgtgattgaacaaatgcgctttaagcagaggctgagggtcatccag
acgatcgaggacaccaccaagcgcaacgtggttcggaccatcataacagagacatccttc
accatagatgaactggaggagctttactcacttttcaaggcagagcacttgaccagctgt
tactggggtggcaccagtaaccctatggatcgacacgaccccagcctgccgtatctggag
cagtaccgcatggacctggagcagtttaagagcctgttcactgttctgttctcctgggcc
agcgggacacacaccgacagcctggccatgcgcttcttccgcctgctggaccagaacact
gacgctctcatcaacttcagagagttcatcaccggcctgggagttctgtgccatggtgac
ctcactgagaagctcaaactcctctacaagatgcacatactgccagagctgcatcacgaa
caggatgagccggattccgctttcgaggccacgcagtacttctttgaggacattacccca
gagacgtcccacggtctggaccacaagagcaaaaatgataaagatgatggatttgtgaga
gtcacattcaagaatgagaaagtgaagaaaatgcacacgccagactaccgcacctactta
cgactgtggaaccaggagaccaaatccaaaccggagaacatgaagaacctcccaaaactc
aaccagggtcagttcatcgagctctgcaagaccctctacaacatgttcagcgaggacccc
aacgagcaggagctgtaccatgccacagccaccgtcaccagcctgctgctggagatgggt
gaggtggggaagctcttctgcagtccctccagcaaagaggaggaggatgatgacgaggat
gacgaggaggaagaagagcgccccccagtgaacaggaggaaacagcagagaatccgcgga
gactctttccaatcatctaccgaggagacccggggcaagctctccagcacagggtctggt
ggtgcagctgagggcgagctaaactccacctgcatcacagggcccatggaggacattaag
ctggaagactcttcgcccaaagacaatggcacatcttcagccatgctcatctccgacgac
gagacgaaagacgacacgtccatgtcctcgtactccgtcctgagtgccggctctcacgag
atggacgacaagctgcagtgcgaagacatagctgaggatacagtgctggtgcgcaacagt
gagccccacgggggagctgggcctcgtggtggaagtgggcctcacggtgcaggtgggctt
ccacacagtgctagcattgataaagactgggctatcactttcgagcagtttttggcctcc
gttctcactgaacaggccctggtccagtactttgagaagcctgtggacatcgcagctcgt
attaccaatggaaaaaatgtgcggaaagttggtcaggcacacctgtccgtcagtgactac
gaaatttcgatttcaggctaa
DBGET
integrated database retrieval system