Astyanax mexicanus (Mexican tetra): 103037497
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Entry
103037497 CDS
T05042
Symbol
nectin1a
Name
(RefSeq) nectin cell adhesion molecule 1a isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03266
Virion - Herpesvirus
amex04514
Cell adhesion molecule (CAM) interaction
amex04517
IgSF CAM signaling
amex04520
Adherens junction
amex05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
103037497 (nectin1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
103037497 (nectin1a)
04517 IgSF CAM signaling
103037497 (nectin1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
103037497 (nectin1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103037497 (nectin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amex04515
]
103037497 (nectin1a)
04090 CD molecules [BR:
amex04090
]
103037497 (nectin1a)
Cell adhesion molecules [BR:
amex04515
]
Immunoglobulin superfamily
Nectin family
103037497 (nectin1a)
CD molecules [BR:
amex04090
]
Proteins
103037497 (nectin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_2
Ig_3
I-set
ig
Sema4F_C
Ig_PVRIG
Motif
Other DBs
NCBI-GeneID:
103037497
NCBI-ProteinID:
XP_022531717
Ensembl:
ENSAMXG00000039599
UniProt:
A0A3B1KB50
LinkDB
All DBs
Position
17:complement(6678791..6744891)
Genome browser
AA seq
490 aa
AA seq
DB search
MMTLALRFTLITALLLPGVSGQMVQMDSDRSGYVGSQVELRCEFINSNPPVKISQVTWQK
FSNGTKQNVAIANPALGVSVLQPFKERVRFKNPAVRQRTPSLEDTTIIFNNLRLSDEAAY
ICEYTTFPAGNRESMVNLTVYARPMVQMSLSTPTIVAGSKDLKMTVATCTSANGKPPSVI
TWDTELDGEVNTEEIRNADGTITVRSDYIVVPSRETHQQRLTCISTYNEEQYTDSVNLNI
QYEPEVIIDGFDGNWYINRDNVQLTCLADANPAISLFQWRYLNGSMPDAVELRDDTLIFK
GPITYGIAGTYVCDATNSIGTGSASVEVTVSEFPSFSDGVSQEQQRAGAAIGGAVVCGTV
LLAAVTLLAVFFHRQRRTFKGDYSTKKQVLGNGLGKAGGLAPCPSLPHSLSYPEDSSDEK
KPELYGAEHIQEFHDYPDSRVKSYSTVEDSTRYRYDEPSYLYDCGSEVEISVDMVPQMDG
SVISKEEWYV
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgatgactttggcactgaggttcactctaatcactgccctcctactgccaggtgtcagc
ggtcagatggtgcagatggacagtgaccggtcaggatatgtgggctcacaggtggagctg
cgctgcgagttcatcaacagtaacccacctgtgaagatctcgcaggtaacctggcagaag
ttctccaatggaaccaagcagaacgtggccattgctaacccagccctgggggtgtctgtg
ctgcagccctttaaggagcgtgtgagattcaagaacccagcagtgcgccagagaacaccg
tccctggaggacaccaccatcatcttcaataacttgagactgtctgacgaggctgcatac
atctgcgagtacaccaccttccctgctggcaacagggagagcatggtcaaccttaccgtt
tacgctcgccctatggtccagatgagcctgtccacacccaccatcgtcgcaggatctaaa
gacctgaaaatgacagtggccacgtgcacctcagccaatggaaagccgccgagtgtgatc
acctgggacactgagctggacggagaggtgaacactgaggagatcaggaatgctgatgga
acgatcacagtgcgcagtgactacatagtggtgcctagccgagaaacgcaccagcagcgg
ctcacctgtatctccacctacaacgaggagcagtacactgacagtgttaacctcaacata
cagtatgagccggaggtaatcattgacggatttgatggaaactggtatataaaccgagac
aatgttcagctcacctgcctggctgatgctaacccagccatctctttgtttcagtggaga
tatctaaatggctccatgccggatgcagtggaactcagagatgatacactaatcttcaaa
ggtccaataacctatggaatagcaggcacgtacgtgtgtgatgccacgaacagcattgga
acgggttcagcgtcagtagaggtcacagtttcagaattccctagtttctcagacggggtt
tctcaggagcagcagcgagcaggcgctgccattggcggcgctgttgtgtgtggcacagtt
cttctggcggccgtcacgttgctggcagtcttcttccatcgtcaaagacgcacttttaaa
ggagattatagtaccaagaaacaggtcctgggaaacggtttaggcaaagctggcggtctt
gcaccgtgcccctcgctgcctcatagcctgagctatcctgaagactccagtgacgagaag
aagccagaactttatggagctgaacacatccaggagttccatgattaccctgacagcagg
gtgaagagctacagcacggtggaggacagtacgcggtacagatacgatgaacccagttac
ctgtacgactgtggatctgaggtggagatctcggtggatatggttccacagatggacggt
tctgtcatctctaaagaagagtggtatgtgtga
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integrated database retrieval system
