Astyanax mexicanus (Mexican tetra): 103037499
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Entry
103037499 CDS
T05042
Symbol
ddx23
Name
(RefSeq) probable ATP-dependent RNA helicase DDX23
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103037499 (ddx23)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103037499 (ddx23)
Enzymes [BR:
amex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103037499 (ddx23)
Spliceosome [BR:
amex03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
103037499 (ddx23)
Complex C
U5 SnRNP specific factors
103037499 (ddx23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
zf-C2H2_14
Motif
Other DBs
NCBI-GeneID:
103037499
NCBI-ProteinID:
XP_022519247
Ensembl:
ENSAMXG00000017597
UniProt:
W5LE65
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All DBs
Position
13:complement(16711113..16725105)
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AA seq
813 aa
AA seq
DB search
MAGETNEKRDLDSSGKERERKRSRSRSRERERKVSPGKDRKRHRSRERKRSRSRSKSADR
DRRQKDKERERDKDRDRSRKDRERDKDSHRRDKDRSKKSRSASPKSKDLKIKREKDVKKE
DDDEDEKKKEKVQPLSLEELLAKKKAEEEAESKPKFLSKAEREAEAIKRRELVAEERRRQ
IDDERRKRRVFQDIGRKMMEDPQERERRERRERMERENNGNEDDEGRQKIREEKDKGKEL
QAIKERYLGGMKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKEKHQVQLYGRGFIAGI
DLKQQKRDQSHFYGDLMEKRRTMEEKEQEELRLKKMRKKEAKQRWDDRHWSQKKLDEMTD
RDWRIFREDYSITTKGGKIPNPIRNWKEFDLPPHILEVIDKCGYKEPTPIQRQAIPIGLQ
NRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEDSDQGPYAVILAPTRELAQQIEEE
TIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLGRCTYVV
LDEADRMIDMGFEPDVQKILEYIPVTNQKPDTDEAEDPEKMTQNFESGKHKYRQTVMFTA
TMPPAVERLARSYLRRAAVVYIGSAGKPHERVEQKVILMSEGEKRKKLLEVLSRGFEPPI
IIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRG
IDIHDVSMVLNYDMAKNIEDYIHRIGRTGRAGKSGVAMTFLTKEDSSVFYDLKQAILESP
VSTCPPELTNHPDAQHKPGTILTKKRREETIFA
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggctggagaaactaatgaaaagagagacctggacagctcaggaaaggagcgagagcgg
aaacgcagccggtcgcggtctcgggagagagaaaggaaagtttctccagggaaggaccgc
aaacgtcatcgttcacgtgagcggaaacgctcccgcagccgctccaaatctgcagacaga
gatcgtcgtcagaaagacaaagaaagagaaagagataaggacagagaccgaagccgtaaa
gacagagaacgagataaggacagccacagacgggataaagatcgtagtaagaaatcaagg
agtgcatctcctaaatccaaggatttaaaaataaagagagaaaaagatgtgaagaaagaa
gatgatgatgaagatgagaagaaaaaagagaaggtgcagcctctgtctctggaggagctg
ctggctaaaaagaaagcagaggaggaagccgagtccaaacccaagttcctgtccaaggct
gaacgagaggcagaagcaattaaacgcagagaactagtggctgaagaacgccgccgacag
attgatgatgagaggcggaagaggagagtgttccaggacattgggaggaagatgatggag
gatcctcaagagagagagcgccgtgaacgcagagagcgaatggaaagagagaacaatgga
aacgaggatgatgagggacgacagaagatacgagaggaaaaagacaaaggcaaagaactc
caggccatcaaagagcgttatttaggtggaatgaagaaacggcggcgcaccaggcacctt
aacgacaggaagtttgtgtttgagtgggatgcttctgaggacacgtccatcgactataac
ccactgtataaggagaagcatcaggtgcagttgtacggccgtggctttatcgcaggtatt
gatctcaaacagcagaagagagatcagtctcatttttatggagacctgatggagaagagg
cgcaccatggaagagaaagagcaggaagagctgcgtctgaagaagatgagaaagaaggag
gctaagcagcgctgggacgaccggcactggtctcagaagaagctggatgagatgacggac
agggactggagaatctttcgggaggattacagcatcaccaccaagggaggcaaaatcccc
aaccccatccgcaactggaaagagttcgacctgccgcctcacatcctggaggtcatcgac
aagtgtggctataaggaaccaactcccatccagaggcaagccattcctattggtttacag
aaccgtgacattattggtgttgctgagaccggtagcggtaaaactgctgccttccttatt
cccttactggtctggatcaccactctgcccaagattgaccggattgaggactctgatcag
ggtccgtatgcagtaatcttggcccccacgcgtgagttggctcagcagattgaagaagag
accatcaagtttggtaaaccactgggcatccggacggtggctgtgattggaggaatctcc
agagaggaccagggtttcagacttaggatgggctgtgagatagtgattgccacacctggt
cgtttgattgacgtgttggagaatcgctacctggtgctcggcagatgcacatacgtggta
cttgatgaggctgataggatgattgacatgggtttcgagcctgatgtccagaagattctg
gaatatattccagtgaccaatcagaaaccggacacagatgaagctgaggacccagagaag
atgacgcagaactttgagtctggcaaacacaaatacagacagacggtcatgtttacagcc
accatgcctccggctgtagaacgactggccagaagctatctgcggcgcgctgcagtcgtc
tacataggctctgcaggaaaaccacacgagagagtggagcagaaggtcatcctgatgtcc
gagggcgagaagagaaagaagcttctggaggttctctcccgtggtttcgagccacctatc
atcatcttcgtcaaccagaagaagggctgcgatgtgttggccaagtctctggagaaaatg
ggctataatgcctgtactctgcacggtggtaaaggacaggagcagagagagttcgctctg
tctaacttgaaggccggagccaaagacatcctggtggccactgatgtggctggtagaggt
atcgacatccacgacgtctccatggtccttaactatgacatggccaaaaacattgaggac
tatatccatcgtattggccgaacgggtcgtgctggaaagagtggtgttgccatgaccttc
cttaccaaagaagactcgtccgtgttctacgatttgaagcaggccattctggagagccct
gtttccacgtgtcctccagagctcaccaaccaccccgacgcccaacacaagcctgggacc
attctcaccaagaagaggagagaggagaccatttttgcctaa
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integrated database retrieval system
