Astyanax mexicanus (Mexican tetra): 103037605
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Entry
103037605 CDS
T05042
Symbol
ttc28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amex03037
]
103037605 (ttc28)
Cilium and associated proteins [BR:
amex03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
103037605 (ttc28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TPR_10
TPR_MalT
TPR_16
RPN7
TPR_17
TPR_14
TPR_11
TPR_NPHP3
TPR_9
TPR_19
PUB
TPR_6
Motif
Other DBs
NCBI-GeneID:
103037605
NCBI-ProteinID:
XP_022536494
Ensembl:
ENSAMXG00000019813
LinkDB
All DBs
Position
20:968888..1212192
Genome browser
AA seq
2469 aa
AA seq
DB search
MEKQGARREKFSLFGPRALGRAVHAAAEGPGLSKAEFMEKVRRSNEACQRGDFQTAVKLY
GEALRADPQNCILYSNRSAAHLKLGQYQTALDDAVKARLLNPKWPKAYFRQGVALQYLGR
HADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRESLEPTYQQLQKMKLDKSPFVVVSV
IGQELLTASHHGASVVVLEAALKIGTCSLKLRGSVFSALSSAYWSLGNTEKSTGYMQQDL
EVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQLVLAMKLKDREAASSALSSLG
HVYTAIGDYPNALASHKQCVLLAKQSKDQLAEARELGNMGAVYIAMGDFDNAVQCHEQHL
GIAKALGDKREEARAYSNLGSAYHYRRNFDKAMSYHTHVLELAQELEEKPIEMRAYAGLG
HAARCMQDLERAKQYHEQQLSIAEGLKDRAAEGRASSNLGIIHQMKGDYETALKLHKAHL
SIAQELNDYAAQGRAYGNMGNAYNALGAFDQAVRYHRQELQISMEVNDRASQASTHGNLA
VAYQALGAHDRALQHYQNHLNIARELRDIQSEARALGNLGNFHCSRGEFPQAVPYYEQYL
RLSPDLQDMESEGKICHNLGYAHYCLGSFQEAVKYYEQDLALAKDLHDKLSQAKAYCNLG
LAFKALGDYNKAEECQKYLLSLSQSLNNSQARFRALGNLGDIFLCKKDVPGAIKFYEQQL
ALAHQVKERKMEANAYAALGAAYRMLQKYDKALGYHTQELEVYQELGDSQGECQAHGHLA
AVYMSLGKYSMAFKCYEEQLELGQRLKDPSVEAQVYGNMGITKMNMGVMEDAIGYFEQQL
AMLQQLSGNEAVLDRGRAYGNLGDCYDSLGDYEEAIKYYDQYLSVAQSLNHMQDQEKAYR
GLGNGHRAMGNLQQSLVCFEKRLVVAHELGECSGKAQAYGELGSLHSQLGNYEQAISCLE
RQLAIARDTSDPLLEGQASCGLGAVYQLMGEYDTALQFHQRDLQIAEEMSSSGCQGRAYG
NLGLTYESLGNFERAVVYQEQHLSIAAETNDLAAKTQAYSSLGRTHHALQNYSQAVMYLQ
EGLRLAEQLGRREDEAKIRHRLGLSLWASGNLEEAQHQLYRASALFETIRHEAQHSTDYK
LSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPYTPVT
VEHILDTVNSQRALVLYFSLAAGYLYSWLLAPGSGILKFHEVYLGDGASEGGTSDFQESG
GVSLQAVGGGGSSLEQHIANAREALGVDSYYSRVCSSSETESEAGDLLDQQFEELNNKLN
SVTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTVSPVKEGSSSLSRRSSALSKPPLRALYD
LLIAPMEGGLMHSSGPVGRHRQLVLVLEGELYLIPFALLKGSSSNEYLYERFSLIAVPSI
GSLGATAKVHPRRAGPALCSGGSSMAAVVGNPRLPSSVMDRWLWGPMPTAEEEASMVAEL
LGCQPLAGPAATKERVMSALSQAECAHFATHISWKLAALVLTPSQDVGPGAGAAAPCGAS
GSAEGAGKSSYTIPESLRMQDDASDAESICDSPPLQEFLLTAADILDLRLPVKLVVLGSY
QESDSKVTADGVVGLTRAFLAAGAQCVLVSLWPVPVAASKMFVHAFYTALLNGTKASAAL
ADAMKTVQSSKQFSHPSNWAGFMLIGSDVKLNSPSSLIGQALAEILQYPDKARDALRVLL
HLVEKSLQRIQNGQRNSMYTSQQSVENKVGGVPGWQALLTAVGFRLDSAGTGLPSAVFFP
TADPGDRLQQCSTTLQSLLGLPPPALQALCKLITASETGEQLISRAVKNVVGMLHQVLVQ
LQSGEKEQDFSLAPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVVLKTGKQANRRT
MHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSHQLPLGYPNPPFSPPCPDSLA
SDAISVYSLSSIASSMSFLSRPDGALDLTGQQLDRHRGLFAPQRHAAVPRSRSSPHSAAA
GTGHDDEEYEGYSIISSEPLGTHCDTLPRPAGARHHRGATRGGVGRGYGASVSSRGSVST
PTSPVKASLIPSPNSPFQKVGKVSSSDTGESDQSSTETDSTVKSQEERPPGAPLDPQELA
QKILEETQSHMRAVETLQRSARHAAASDGTRAGEASTPTGGSAFRSSETSAFSRPNSRAS
IKAQSSPLPSRPKPPSRTSSLQKISSGYNSPATSETSLKDGSQPSPTSDGHNQFKLKYPS
SPYSGHISRSPSNISPSSGHQSPAGSAPSPALSYSSTGSTRSSPADAPTDLDRLRLAAID
EKVQAIHNLKTFWASATQQHHSGPMRAVRGGAKMSPAQRDVLGLLNLSPRHHGVGTGQDM
TGHELQDMGLQSLERRNPPNGHRKIDPKRVAPSPTAPTGRSPGSHPIRLPTGNGYKFLSP
GRFFPSSKC
NT seq
7410 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacagggcgcgagaagagagaagttttcgctgtttgggccccgggcgctgggc
agggcggtgcacgcggcggccgagggtcccggtctgagcaaggccgagttcatggagaaa
gtgcggcggagtaacgaggcgtgccagcggggagacttccagacggccgtgaagctttac
ggagaggctctgcgggccgacccacagaactgcatcctctacagcaaccgctcggctgcc
cacctcaaactgggccagtaccagactgccctggacgacgcagtgaaggcacggctcctc
aaccccaagtggccaaaggcgtacttccgacagggtgttgccctccagtacctgggtcgg
cacgcagatgccctggctgcgttcgcctcgggtctggcccaggaccccaagagcctgcag
ctgctggtcggcatggtggaggccgccatgaagtcgccactacgagaatctctggagccc
acctatcagcagctgcagaagatgaagctggacaagagcccgtttgtggtggtgtcggtc
atcggccaggagctgctgaccgcctcccaccacggcgcttctgtggtggttctggaggcg
gcgctgaagatcggtacctgcagcctgaagctccgcggctcggtgttctccgccctcagc
agcgcctactggtcactgggcaacacggagaagagcacggggtacatgcagcaagacctg
gaggtggccaagactttaggtgaccagacgggcgagtgcagggctcacgggaacctgggg
tcagccttcttctccaagggcaattaccgcgaggccctgaccaaccacagacaccagctc
gtcctggccatgaagctgaaggacagagaggcggcgtcgtcggcgctcagcagcctgggc
cacgtctacacggcgattggcgactaccccaacgccctggccagccacaagcagtgcgtc
ctgctggccaagcagtccaaggaccagctggcagaagctcgcgagttgggcaacatgggc
gccgtctacatcgccatgggggacttcgacaacgccgtgcagtgccacgagcagcacctg
ggcatcgccaaggctctgggcgataagcgcgaggaggcgcgcgcctacagcaacctgggc
agcgcctaccactaccgccgcaactttgacaaggccatgtcctaccacacccacgtgctg
gagctggcacaggagctggaggagaagcccatcgagatgcgggcgtacgccggcctgggc
cacgctgcccgctgcatgcaggacctggagcgcgccaaacagtaccacgagcagcagctc
agcatcgccgagggcctaaaggaccgcgccgccgagggacgcgcctcctcaaacctggga
ataatccaccagatgaaaggagattacgagacggctttgaagctgcacaaagctcacctc
tccattgcccaggagctgaacgactacgctgcccagggcagggcctacggcaacatgggc
aacgcttacaacgctctcggcgcctttgaccaggctgtgcgctaccaccggcaggagctg
caaatctccatggaggtcaacgatcgtgcctcgcaggcctctacccacggcaatctggcc
gtggcctaccaagccctgggggctcatgatcgagccctgcagcactaccagaaccacttg
aacattgcccgcgagctacgcgacatccagagcgaggcccgggccctggggaacctgggg
aacttccactgctcgcggggcgagttccctcaagccgtgccctactacgagcagtacctg
cggctctcgcctgacctccaggacatggaaagcgagggcaagatctgccacaacctgggc
tacgcccattattgcctgggcagtttccaggaagcagtaaagtactacgagcaggacctg
gcactggccaaagatctgcacgataagttgagtcaagccaaagcctactgcaacctgggc
ctggccttcaaagccctgggtgactacaacaaggccgaagagtgccagaagtacctttta
tctttgtcccagtcgctaaacaactcgcaggccaggttccgcgctctgggaaaccttggc
gacatcttcctctgcaaaaaggacgtacccggtgcaatcaagttctacgagcaacagctg
gcactggcgcatcaagtcaaggaacgtaagatggaggccaatgcttacgctgctttaggg
gctgcataccggatgctgcagaagtacgataaggctcttggataccacacgcaggaactg
gaggtataccaggagcttggggacagccagggagagtgccaggctcacgggcacctcgcg
gctgtctacatgtccctggggaagtacagcatggccttcaagtgctatgaggagcagctg
gagctcggccagaggctgaaggatcctagcgtggaggcccaggtctacgggaacatgggc
atcaccaaaatgaacatgggggtgatggaggacgccattggctactttgagcagcagctg
gctatgctgcaacagcttagtggcaacgaggcagtgctggatcgtggccgggcgtacgga
aacctgggagactgctacgattcactaggtgactacgaggaggccatcaagtactacgac
cagtacctatcagtggcacagagcctgaaccacatgcaggatcaggagaaggcctataga
ggactgggcaatggacacagagcgatggggaacctgcagcagtctctggtgtgttttgag
aagaggctggtggtggctcatgagctgggcgagtgcagcgggaaggcgcaggcgtacggg
gagctgggcagcctccacagccagctgggaaactacgaacaggccatctcctgcctggag
cgtcagctcgccatcgcccgagacacctccgaccccctgctggagggccaggccagctgc
gggctgggcgccgtctaccagctgatgggcgagtacgacacggcgctgcagttccaccag
cgagacctgcagatcgccgaggagatgagcagctccggctgtcagggtcgggcgtacggg
aacctgggcctcacctacgagtctctggggaacttcgagcgggcggtggtttaccaggag
cagcacctgagcatcgccgccgagaccaacgacctggcggccaagactcaggcctacagc
agcctgggccgcacccaccacgccctccagaactactcccaggcagtgatgtacctgcag
gaaggtctgcgtctggcggagcagctgggccggcgtgaggacgaggccaaaatccgccac
cgtctggggctctcactgtgggccagcggcaacctggaggaagcccagcaccagttgtat
cgtgcctctgctctgtttgagactattcgacacgaggctcagcacagcaccgactacaag
ctctccctgttcgacctgcagacctcctcataccaggctctccagagggtcctcgtcagc
ctcggtcatcatgatgaggcgctggcggtggccgagcggggcaggaccagggccttcgcc
gacctgctggtggagcggcagacgggtcagcaggactcagacccctacacccccgtcacg
gtggagcacatcctggacacggtcaacagccagcgggccctggtgctctacttctcgctg
gcggcgggatacctgtacagctggctgctcgcccccggctcaggtatcctgaagttccat
gaagtgtacctgggcgatggggcatctgagggcgggacttccgacttccaggagtccggg
ggcgtgtctctgcaggcggttggagggggcgggtcttcgctggagcagcacatcgctaac
gcccgcgaggctctgggcgtggactcctactacagcagggtgtgctccagcagtgagact
gagagtgaggcgggtgatcttctggatcagcagtttgaggagctgaacaacaagctgaac
tctgtcaccgacccgacgggcttcctcaggatggtctccagaaacaacctcttcaacagg
agctgtcagagtatgacgagtctgttcagtaacacagtgtctccagttaaagaaggaagc
tcctctctgtcccgtcgctccagcgctctcagtaaacctcctctcagagctctgtacgac
cttctcattgctcctatggaagggggtctgatgcactccagtggtccggtgggtcggcac
aggcagctggttctggttctggaaggtgagctgtatctgatccccttcgccctgctgaag
ggaagctcctccaacgagtatctgtacgagcgcttcagcctcatcgccgtgccctccatc
ggcagcctgggggcaaccgccaaggttcatcctcgtcgtgcggggccggcgctctgcagt
gggggcagctccatggcggcggtggtgggtaaccctcgcctcccgtcctcagtgatggac
cgctggctgtggggtccgatgcccacggctgaagaggaggccagcatggtggcggagctg
ctgggctgccagcctctggccggtccggccgccaccaaggagcgggtgatgagcgcgctg
agccaggccgagtgcgcccacttcgccacccacatctcctggaagctggctgccctggtg
ctgacacccagccaggacgtgggccccggggctggggccgccgctccctgcggggcgtcc
gggagcgcggagggggctgggaagtccagctacaccattcctgagagcctgcggatgcag
gacgacgccagcgacgccgagagcatctgcgacagcccgccgctgcaggagttcctgctc
accgccgccgacatcctggacctcagactgcccgtcaaactggtggtgctggggtcgtat
caggagtcggacagtaaggtgacggcggacggggtggtgggtctgacccgggcgttcctg
gcggcgggggctcagtgtgtgctggtgtctctctggcccgtacccgtcgccgcatccaag
atgttcgtccacgccttctacaccgccctgctgaacggcaccaaggccagcgccgccctc
gctgacgccatgaagaccgtccagagcagcaagcagttctcacacccctccaactgggcc
ggcttcatgctgattggcagtgatgtgaaactgaacagcccctcgtccctgattggccag
gctctggctgagatcctgcagtatcccgacaaagccagagacgccctgagggtcctgctg
cacctggtggagaaatctctgcagcgtattcagaacgggcagcgtaactccatgtacacg
tctcagcagagtgtggagaataaggtgggcggggtgccgggctggcaggctctgctcacc
gccgtgggcttcagactggactcggccggtaccggccttcctagcgccgtcttcttccct
acggccgacccgggagaccggctccagcagtgcagcaccaccctgcagtccctgctaggt
cttcctcctcctgccctgcaggccctgtgtaaactcatcaccgcctcagagaccggagag
cagctcatcagccgggctgttaaaaatgtagtgggaatgctccaccaggttctggttcag
cttcagtccggagagaaggagcaggatttctctctggcgccgattcaggtctccatcagc
gtccagctctggaggctcccgggctgccacgagttcctcgctgctctggggtttgatctg
tgtgaggtcggtcaggaggaagtggtgctaaagacgggaaagcaggcgaaccgccgcacc
atgcacttcgctctgcagtctctgctggcgctgttcgactccacagagctgccgaagcgc
ctgagtctggacagctcctcctccctggagtctctggcttctgcccagtcagtgtcccac
cagctgcccctggggtaccccaacccccccttctccccgccctgtcccgacagcctagcg
tcggacgccatctccgtctacagcctgagctccatcgcctcctctatgagcttcctctcg
cgtcccgacggcgccttggaccttaccggtcagcagctggatcgccaccgcggcctcttc
gccccccagcgtcacgcggccgtgccccgcagccgctcctccccgcacagcgccgctgcc
ggcaccggccacgacgacgaggagtacgagggctacagcatcatcagcagcgagcctctg
ggcacccactgcgacacgcttccacgcccggcgggggccaggcaccaccgcggtgcgacc
cgcgggggcgtgggcagggggtacggggcatcggtgtcctccagagggagcgtcagcacc
ccaacatcaccggtaaaagcgagcctcatacccagtccaaactccccctttcagaaggtg
ggcaaggtgagcagctctgatacgggcgaatcggaccagtccagcaccgaaacggacagc
actgtgaaatcgcaggaggagcgacctcccggagcccctctggacccgcaggaactggcg
cagaagatcctggaggagacccaaagccacatgagagcagtggagaccctgcagaggagc
gccaggcacgcggccgccagcgacggcacgagagccggcgaagcctcgaccccaaccgga
ggatccgccttccgttcatcagaaaccagcgccttcagccgacccaacagcagagccagc
atcaaagcccagtcctcgccgctccccagccgccctaaaccgccgtctcgcacctcatca
ctccagaagatcagctccggctacaacagtcccgccacctccgagacgtcgctaaaggat
ggcagccagccctcgccgacctccgacggccacaaccagttcaagctcaaataccccagc
tcgccctacagcggccacatctcgcgctcgcccagcaacatctcccccagctccgggcac
cagtcgcccgccggcagcgccccctcgcccgccctgtcctactcctccaccggctccacc
cgctccagccctgccgacgcccccaccgacctcgaccggctcaggctggctgccatcgac
gagaaagtacaagccatccacaatctaaaaaccttctgggcgagcgccacccagcagcat
cactccggcccaatgagggccgtccggggcggagccaaaatgagtcccgcccaaagagac
gtcctaggccttctcaacctgtcccctcgccaccacggcgttggcacgggtcaggacatg
accggtcacgaactgcaggacatggggcttcagtccctggagcgcaggaaccctccaaac
gggcatcgaaaaatcgacccgaagcgagtcgccccgtcgccgaccgcgcccaccgggagg
agccccggctcccatccaatcagactgcctacaggaaacgggtacaagttcctgtctcct
gggaggttcttcccctcatccaaatgctga
DBGET
integrated database retrieval system
