Astyanax mexicanus (Mexican tetra): 103037777
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Entry
103037777 CDS
T05042
Symbol
si:ch211-79m20.1
Name
(RefSeq) bromodomain-containing protein 4B isoform X1
KO
K17386
platelet-derived growth factor subunit B
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04010
MAPK signaling pathway
amex04020
Calcium signaling pathway
amex04510
Focal adhesion
amex04540
Gap junction
amex04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103037777 (si:ch211-79m20.1)
04020 Calcium signaling pathway
103037777 (si:ch211-79m20.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103037777 (si:ch211-79m20.1)
04540 Gap junction
103037777 (si:ch211-79m20.1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
103037777 (si:ch211-79m20.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
amex04052
]
103037777 (si:ch211-79m20.1)
00536 Glycosaminoglycan binding proteins [BR:
amex00536
]
103037777 (si:ch211-79m20.1)
Cytokines and neuropeptides [BR:
amex04052
]
Cytokines
Growth factors (RTK binding)
103037777 (si:ch211-79m20.1)
Glycosaminoglycan binding proteins [BR:
amex00536
]
Heparan sulfate / Heparin
Growth factors/receptors
103037777 (si:ch211-79m20.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
PRIMA1
Motif
Other DBs
NCBI-GeneID:
103037777
NCBI-ProteinID:
XP_007257677
Ensembl:
ENSAMXG00000004573
UniProt:
A0A8B9JDL4
LinkDB
All DBs
Position
23:22374531..22395659
Genome browser
AA seq
526 aa
AA seq
DB search
MSSRSVCLSSRWSLLLLLAAFLRFGGAQDESLPPSLVDLVMNSPISSMQDLQRLLDVESV
EEEEDEVHPNGTHKRLPRSLAGVQVAQQAMCKVRTEVMEVTRAMLDRRNANFLLWPLCVE
VQRCSGCCNTRTLQCVPVTTETRHLQMTKIQFINRQPVYEKVVIPVEDHLTCSCQSRAVA
PAPRAKATPPPPPPRLPPKVTPPKIQSKEELHRHDDLKQNQRFHLEDRETQEAQWQSKYT
VTHTQGSPVHTLTHTQGLPVHTLTHTQGYRPSPVQHTLTHTPAGPSYVSLEDTSTRRTTL
GVPHMQSDTTQHFTHQDGLQDRHAKTEHHTHLSTHSSTHQGSGDGSSKVQHQTPKERHSH
QHHQHHIHLQHDQATPQHSTPIHDSSQSHGSNHHLSKSDVNLHHSSQLEAPILSYSHVEV
IGQSSGQTELPDHVSGQSEAANHNHHSQTDRGEHRQEQSQHGHHHHHHHHQPTQASSTAG
AVMNAPPTAPPAPQTPPPPVPQRRRRRKHRRRISKSAMRAMIMVMS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgcgctcggtgtgtctgagctcgcgctggagtttactgctgctgctcgcggcg
tttctgcggttcgggggcgcgcaggatgagtctcttcctccgtctctggttgatctggtg
atgaacagtccgatctcctctatgcaggatctgcagaggctgctggacgttgaatccgta
gaagaggaggaagatgaggtccatcctaacggcacacacaagcgccttcccagaagcctc
gctggggtgcaggtggcgcagcaggcgatgtgtaaggtgaggacggaggtgatggaggtg
acgcgggccatgctggaccgacgcaacgccaacttcctgttgtggccgctgtgtgtggag
gtgcagcgctgctccggctgctgcaacacccgcaccctgcagtgtgttccggttaccacg
gaaacacgacacctacagatgaccaagatccagttcatcaacagacagccggtctacgag
aaggtggtcatacctgtggaggaccacctcacctgcagctgtcagtcacgcgccgtggcc
cccgcgcctcgagcaaaggccacgccccctcctcctccacccagactcccccctaaagtc
actccacccaagatccagtcgaaggaggagctgcatcgccacgacgacctcaagcagaac
cagaggttccacctggaggacagagagactcaggaagcgcagtggcaatccaaatacaca
gtcacacacacacagggctcacccgtacacacactcacacacacacagggcttacccgta
cacacactcacacacacacagggctaccggcccagcccggtccaacacacactcacacac
actccggctgggccatcgtacgtcagtctggaggacacgtccaccagaagaaccacgctg
ggagtcccccacatgcagagcgacaccacccagcactttacgcatcaggacgggctacag
gaccgccatgcaaagacagagcatcacacacacctgagcacacactcgagcacacaccag
ggcagtggtgatggcagctccaaagttcaacaccaaacaccaaaggagcgccacagtcat
cagcaccatcagcatcacatacacttacagcacgaccaggcgacaccacagcacagcacg
cccattcacgattccagccaatcgcacggctccaatcatcatctcagcaaatcagacgtg
aaccttcaccacagcagccaactggaggcccccattctcagctacagccatgtagaagtg
atcggccaatccagtggacagacagagctgcctgaccacgtctccggccaatcagaagca
gccaatcacaaccaccacagccaaacggatcgtggtgaacaccgtcaagagcaatcccaa
cacggccatcatcaccatcatcatcaccatcaaccaacacaagctagcagcacagcagga
gcagtgatgaacgcccccccgactgcaccgcctgcacctcagactccacctccacccgtc
cctcagcggagacgacggaggaaacaccgaaggaggatcagcaagtctgccatgagagcc
atgatcatggtaatgtcctga
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