Astyanax mexicanus (Mexican tetra): 103037777
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Entry
103037777 CDS
T05042
Symbol
si:ch211-79m20.1
Name
(RefSeq) bromodomain-containing protein 4B isoform X1
KO
K17386
platelet-derived growth factor subunit B
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04010
MAPK signaling pathway
amex04020
Calcium signaling pathway
amex04510
Focal adhesion
amex04518
Integrin signaling
amex04540
Gap junction
amex04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103037777 (si:ch211-79m20.1)
04020 Calcium signaling pathway
103037777 (si:ch211-79m20.1)
09133 Signaling molecules and interaction
04518 Integrin signaling
103037777 (si:ch211-79m20.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103037777 (si:ch211-79m20.1)
04540 Gap junction
103037777 (si:ch211-79m20.1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
103037777 (si:ch211-79m20.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
amex04052
]
103037777 (si:ch211-79m20.1)
00536 Glycosaminoglycan binding proteins [BR:
amex00536
]
103037777 (si:ch211-79m20.1)
Cytokines and neuropeptides [BR:
amex04052
]
Cytokines
Growth factors (RTK binding)
103037777 (si:ch211-79m20.1)
Glycosaminoglycan binding proteins [BR:
amex00536
]
Heparan sulfate / Heparin
Growth factors/receptors
103037777 (si:ch211-79m20.1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF
PDGF_N
PRIMA1
Motif
Other DBs
NCBI-GeneID:
103037777
NCBI-ProteinID:
XP_007257677
Ensembl:
ENSAMXG00000004573
UniProt:
A0A8B9JDL4
LinkDB
All DBs
Position
23:22374531..22395659
Genome browser
AA seq
526 aa
AA seq
DB search
MSSRSVCLSSRWSLLLLLAAFLRFGGAQDESLPPSLVDLVMNSPISSMQDLQRLLDVESV
EEEEDEVHPNGTHKRLPRSLAGVQVAQQAMCKVRTEVMEVTRAMLDRRNANFLLWPLCVE
VQRCSGCCNTRTLQCVPVTTETRHLQMTKIQFINRQPVYEKVVIPVEDHLTCSCQSRAVA
PAPRAKATPPPPPPRLPPKVTPPKIQSKEELHRHDDLKQNQRFHLEDRETQEAQWQSKYT
VTHTQGSPVHTLTHTQGLPVHTLTHTQGYRPSPVQHTLTHTPAGPSYVSLEDTSTRRTTL
GVPHMQSDTTQHFTHQDGLQDRHAKTEHHTHLSTHSSTHQGSGDGSSKVQHQTPKERHSH
QHHQHHIHLQHDQATPQHSTPIHDSSQSHGSNHHLSKSDVNLHHSSQLEAPILSYSHVEV
IGQSSGQTELPDHVSGQSEAANHNHHSQTDRGEHRQEQSQHGHHHHHHHHQPTQASSTAG
AVMNAPPTAPPAPQTPPPPVPQRRRRRKHRRRISKSAMRAMIMVMS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgcgctcggtgtgtctgagctcgcgctggagtttactgctgctgctcgcggcg
tttctgcggttcgggggcgcgcaggatgagtctcttcctccgtctctggttgatctggtg
atgaacagtccgatctcctctatgcaggatctgcagaggctgctggacgttgaatccgta
gaagaggaggaagatgaggtccatcctaacggcacacacaagcgccttcccagaagcctc
gctggggtgcaggtggcgcagcaggcgatgtgtaaggtgaggacggaggtgatggaggtg
acgcgggccatgctggaccgacgcaacgccaacttcctgttgtggccgctgtgtgtggag
gtgcagcgctgctccggctgctgcaacacccgcaccctgcagtgtgttccggttaccacg
gaaacacgacacctacagatgaccaagatccagttcatcaacagacagccggtctacgag
aaggtggtcatacctgtggaggaccacctcacctgcagctgtcagtcacgcgccgtggcc
cccgcgcctcgagcaaaggccacgccccctcctcctccacccagactcccccctaaagtc
actccacccaagatccagtcgaaggaggagctgcatcgccacgacgacctcaagcagaac
cagaggttccacctggaggacagagagactcaggaagcgcagtggcaatccaaatacaca
gtcacacacacacagggctcacccgtacacacactcacacacacacagggcttacccgta
cacacactcacacacacacagggctaccggcccagcccggtccaacacacactcacacac
actccggctgggccatcgtacgtcagtctggaggacacgtccaccagaagaaccacgctg
ggagtcccccacatgcagagcgacaccacccagcactttacgcatcaggacgggctacag
gaccgccatgcaaagacagagcatcacacacacctgagcacacactcgagcacacaccag
ggcagtggtgatggcagctccaaagttcaacaccaaacaccaaaggagcgccacagtcat
cagcaccatcagcatcacatacacttacagcacgaccaggcgacaccacagcacagcacg
cccattcacgattccagccaatcgcacggctccaatcatcatctcagcaaatcagacgtg
aaccttcaccacagcagccaactggaggcccccattctcagctacagccatgtagaagtg
atcggccaatccagtggacagacagagctgcctgaccacgtctccggccaatcagaagca
gccaatcacaaccaccacagccaaacggatcgtggtgaacaccgtcaagagcaatcccaa
cacggccatcatcaccatcatcatcaccatcaaccaacacaagctagcagcacagcagga
gcagtgatgaacgcccccccgactgcaccgcctgcacctcagactccacctccacccgtc
cctcagcggagacgacggaggaaacaccgaaggaggatcagcaagtctgccatgagagcc
atgatcatggtaatgtcctga
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