Astyanax mexicanus (Mexican tetra): 103037839
Help
Entry
103037839 CDS
T05042
Symbol
ppfia1
Name
(RefSeq) liprin-alpha-1 isoform X1
KO
K26226
liprin-alpha
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103037839 (ppfia1)
Membrane trafficking [BR:
amex04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
103037839 (ppfia1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
103037839
NCBI-ProteinID:
XP_049339269
Ensembl:
ENSAMXG00000020344
LinkDB
All DBs
Position
9:8034011..8142227
Genome browser
AA seq
1236 aa
AA seq
DB search
MMCEVMPTISEAEVGSNGGGRGSGSPLQSDSEGHFESLMVSMLEERDRLLDTLRETQENL
GLTQGKLHEVSHERDSLQRQLNSALPQEFAALTKEVNMCREQLLEREEEIAELKAERNNT
RLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRER
LRVALERCSALEEQLTVSHKEMAILRDQTNQKKMLIDGQTEINHNSESTPSTNGKRSSDG
SLGPDEDVGKVVELQEVMDRQSKELLQMKERVVSLSNRVSELEEDLDTARKDLIKSEDMN
TRMQRDLRESIAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENELANKESLFRQTE
DKNRQLQERLELADQKLQQTIRKAETLPEVEAELAQRVAALTKAEERHGNVEERLRQMEA
QLEEKNQELLRARQREKMNEEHNKRLSDTVDKLLSESNERLQLHLKERMAALEDKNALIR
ELEHTKKLIEDAHHDKEQLLIQIETMRSESEQDRSRSNSILHQGRSHMGSTPDFRYPVSA
SSMMDSHSDHYSSALVLRRPQKGRAAALRDEPSKVQTLNEQEWERVQQANVLAKVAYAFE
SDVDLSDMEDDRETIFSSVDLLSPAGQADAQTLALMLQEQLDAINNEIRMIQEEKESTAM
RAEEIESRVGSGESLGGRFRSMGSIPPSFHGSSHSGSSPPGSGHSTPRRAPRSPNREADR
MGVMTLPSDLRKHRRKPIQDDKATIQCETSPPSTPRSMRLSKGHAASHEDIRDIRSIAGL
QDGQGSNPSSSNSSQDSLNKAAKKKSIKTSIGRLFGKKEKGRPNPSGKDSPSQAGTPEGD
GSQDAMVLSKLGGPGEKNRKLQKKHELLEEARRQGLPFAQWDGPTVVVWLELWVGMPAWY
VAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMSLTSPSAPPTSRTST
GNVWLTHEEMESLAATPPTEDDEGSWAQTLAYGDMNHEWIGNDWLPSLGLPQYRSYFMES
LVDARMLDHLTKKDLRGQLKMVDSFHRNSFQCGVMCLRRMNYDRKELEKRREESQVEVKD
VLVWSNERVIKWVQSIGLKEYANNLVESGVHGALMSLDETFDHNALALLLQIPTQSTQAR
AVLEREYNNLLSLGTERKLEEDDDKNFRRAPSWRKKFRPKDVRGLGVGSADTLPANFRVT
NSSSPALQPKKHQLDGNVVDSEAPSSGQELSQQQGL
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgaagtgatgcccaccattagtgaggcggaggtggggagtaacgggggcggc
cgggggtccggatcacccctgcagtcggactctgaaggacactttgagtctctgatggtg
tcgatgctggaggagcgggaccggctgctggacactttaagagaaactcaggagaacctg
gggctgacgcagggcaaactgcacgaggtcagccatgagcgagactcgctccagagacag
ctaaactccgccctcccgcaggagttcgctgcgctgactaaggaggtgaatatgtgtaga
gagcagctcctggagagagaggaggagatcgctgagctgaaggccgagaggaacaacacg
cggcttctgctggaacacctggagtgtttagtgtctcgtcatgagcgctctctgaggatg
actgtggtgaagcgtcaggcccagtccccggctggagtgtccagtgaggtggaggtcttg
aaggccctgaagtctctatttgagcaccataaagctctggacgagaaggtgagggagagg
ttgcgtgttgctctagagagatgcagtgcactggaagaacaactaacagtctctcataaa
gagatggctatcctccgagatcagaccaatcagaagaaaatgctcatagacggccagaca
gaaatcaaccacaactccgagagcacaccaagcaccaacggcaagcgctcatcggatggc
tctctggggccggatgaggacgtagggaaggtggtggagcttcaggaggtgatggaccgc
cagagtaaagagctgctgcagatgaaggagcgcgttgtttcccttagcaacagagtcagc
gagctggaggaggacctggacacggcccgcaaagacctcatcaaatcagaggacatgaac
actcgcatgcagagggatctgagagagtctattgcacagaaggaggatatggaggagagg
atcaccacgctggagaaacgctacctggcagctcagagagaggccacgtctgttcacgac
ctgaacgataaactggagaacgaactcgccaacaaagagtcgctcttccgccagacggaa
gataagaaccggcagcttcaggaaaggctggaactggctgatcagaagctccagcagacc
atccgcaaagccgagacgctcccagaggtggaggcggagctcgctcagagagtcgccgcc
ctcactaaggctgaggagcggcacggtaacgtggaggaacgtctgcggcagatggaagct
cagctggaggagaagaaccaggagctgctcagggcacgtcagcgggagaagatgaacgag
gagcacaacaagcgtctgtctgacacagtggacaaacttctgtctgagtccaacgagagg
ctacaactccacctgaaggagaggatggcggcactagaggacaagaacgctctaatccgt
gagctggagcacacaaagaagctgatagaggacgctcaccatgataaagagcagctcctg
atccagatcgagacgatgcgctctgagagtgagcaggaccgcagcaggagtaactccatt
ctacatcagggacggtctcatatgggcagcactccagacttcaggtacccagtatctgcg
tcctccatgatggacagccattctgaccattacagcagtgccctggtgctgagacgaccc
cagaagggccgggctgctgctctaagagacgaaccctcaaaggtgcagactctgaacgag
caggagtgggagcgggtccagcaggccaacgttctggccaaagtcgcgtacgcgttcgag
agcgacgtggacctgtccgacatggaggacgatcgagagaccatcttcagctcggtggac
ctgctgtcccctgctggacaggcagatgcacaaacactcgcactgatgctgcaggaacag
ctggacgccatcaacaacgaaatcaggatgattcaggaggagaaggagagcacggcaatg
cgggcggaggagattgagtccagggtgggcagtggtgagagtctcggtggtcgtttccgc
tctatgggctccatccctccctctttccacggatcctcacactcgggctcctctcctcca
ggatcaggccactccacccctcgcagagccccacgcagccccaaccgagaggcggaccgc
atgggggtcatgaccctgcctagtgatttgcggaagcatcgtaggaagcccattcaagat
gacaaggccacaatccagtgcgagacgtcccccccgtcgaccccccgctccatgcgtctc
agtaaaggacacgcagccagtcatgaagacatcagagacatcaggagtattgctggactg
caggacggtcagggcagtaaccccagcagcagtaacagcagtcaggactcccttaataaa
gccgccaagaagaaaagcatcaagacttccatcggccgtctgttcggcaagaaggagaag
ggccggccgaacccgtcgggcaaagattcgcccagccaagccggcacgccagagggagat
ggttcacaggatgccatggtgctcagcaagctgggaggacccggagagaagaacaggaaa
ctgcagaagaagcacgagttgttggaggaggcccgcaggcaggggctgcccttcgcccag
tgggatggaccgactgtggtggtctggctggagctgtgggtggggatgccagcgtggtat
gtggcagcctgccgtgccaatgtgaagagcggcgccatcatgtccgcgctctcggacaca
gagatccagagagaaatcggaatcagtaacccgctccaccgcctcaaactgcgcctcgcc
atccaggagatcatgtctctgaccagcccctcagcccctcccacctccagaacgtccacg
gggaacgtgtggcttacccatgaggagatggagagcctggcggccaccccacccacggag
gatgacgagggcagctgggcccagactctggcttatggtgatatgaatcacgagtggatc
ggtaatgactggctgcccagtctgggtctgcctcagtaccgcagctacttcatggagtct
ctggtagacgcccgcatgctggatcacctgaccaagaaggacctccgcggccagctgaag
atggtggacagctttcacagaaacagtttccagtgtggtgtgatgtgtctgaggaggatg
aactacgacaggaaggagctggagaagagacgcgaagagtcccaggtggaggtcaaagat
gtgctggtgtggagtaatgagcgagttataaagtgggtgcagtcaatcgggctgaaggag
tatgctaataacctggtggagagcggcgtgcacggagcactgatgtccctggacgagacg
ttcgaccacaacgccctggctctgctgctgcagatacccacccagagcacacaggcgagg
gcagtgctggagagagaatacaacaacctgctgtccctgggaacagagaggaaactagaa
gaggatgatgataagaacttcaggcgggctccctcctggaggaagaagtttcggcccaaa
gacgtgaggggcctcggcgtgggctcggccgacacgctgcccgccaacttcagagtgacc
aactcctcctctccagccctgcagccaaagaaacaccagctggacggtaatgtcgtggac
agcgaagcgccctcttcaggacaggagctgagccagcagcaaggactctga
DBGET
integrated database retrieval system
