Astyanax mexicanus (Mexican tetra): 103037886
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Entry
103037886 CDS
T05042
Symbol
zeb1b
Name
(RefSeq) zinc finger E-box-binding homeobox 1b
KO
K09299
zinc finger homeobox protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103037886 (zeb1b)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
103037886 (zeb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
Zf-C2H2_ZNF451_C
DUF6801
zf-C2H2_6
zf-C2HC_2
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
103037886
NCBI-ProteinID:
XP_022526089
Ensembl:
ENSAMXG00000012742
LinkDB
All DBs
Position
15:35761341..35882406
Genome browser
AA seq
1137 aa
AA seq
DB search
MADGPRCKRRKQANPRRTSVSNYSHVLEGQSDSDDEDKLHIVEEEGSPLDGADGDSVAHD
DEPNGPEDRWDEVKDECVSEEDERSRDALVEKILQQGDTAVIFPEAPEDEPRQGTPETSG
HDENGTPDAFSQLLTCPYCSRGYKRYTSLKEHIKYRHEKSEDNFSCSLCSYTFAYRTQLD
RHMSAHKTDRDQRHVNQTGGGGNRKFKCTECDKAFKYKHHLKEHLRIHSGEKPYECSNCK
KRFSHSGSYSSHISSKKCIGLISVNGRPRPSPATGGAKTPQCPSPSLPSSPATARTQLRD
KLDHAKPLQEQLPLTQIKSEPMDYEYKPVVVAPAAGGVNGVFQGGAAAPLQGAVQAVVLP
TVGLVSPISINLGDLQNMLKVAVDGNVIRQVLENAQTKGQPAGTGRVAIAQAPQQVIQAI
SLPIVDQDGTAKIIINYSLDPSQAQAALQNLKKEPIGQNTDACKTERLPEDLTIKSKTSK
EKPTITTGEEKQLEKSVSDVSPKHCGKEGQQINGMHPEEKSGVDIGLCPGKPPLKNLLSL
LKAYFALNAEPTKEELAKISESVSLPTEVVRKWFEKMQSGQISVEMSSPLSQNEQNAGED
TDETPEELIKLTLEKDKEPQKNLEEQEMELHSPAEGATAGINGTENGPASPSPLNLSADG
PVPARTAEEGDGPLDLSLPKSAAAPNAATTHANTVYSAQDEPLNLTCTKKEASGIANASA
AGYANQTSANPINIVTTQLPTLVAITDQGHGQCLRALTTTKQTILIPQLAYTYTTTASSP
AGGDTQQKTILRVNGIKEEKLENTSELASVLDEQTDSDSGPARKKMKKTENGLYACDLCD
KIFQKSSSLLRHKYEHTGKRPHECGICSKAFKHKHHLIEHLRLHSGEKPYQCDKCGKRFS
HSGSYSQHMNHRYSYCKKENLGQDLLQSPEEEENQSEEQPRPESTAPSPPSQLDSDERGS
SAREDEESEEEEEEEMGSGSMVDEDEIQVVQIGEEGGEEEDEDEEEERMEEEEMTTTQNG
GEEETVVETLVEEEGGGGGEEEEEDGEMMKVVVMQDCEEEEEEEEQDEHDRERAKAEEQA
ENAEPMDTQENKDETQEQTEADEAGERNEGDERGGEELVKVNGANEGNTPSKNRDVK
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgcggcgcacgagcgtg
agtaactacagccatgtactggaaggacagtcagactcagacgatgaggataagcttcac
atcgtggaggaggagggaagccccctggatggagctgatggagacagtgtcgcccacgat
gacgagcccaacggcccagaggacagatgggatgaagtgaaagacgagtgtgtgtcagaa
gaggatgagaggagtcgagatgctctggttgagaagatccttcaacaaggagacacagcg
gtaatttttccagaagcaccagaagacgaaccgcgacagggcacaccagagaccagcggc
cacgacgagaacggcaccccagatgctttctcgcagctcctcacatgtccgtactgctct
cgcggctacaagcgctacacctccctgaaggagcacatcaagtacaggcacgagaagagc
gaggacaacttcagctgctccctctgcagctacaccttcgcctaccgcacacagctcgac
cgacacatgagcgcacacaaaacagaccgagatcagcggcatgtaaaccaaacagggggt
ggaggaaatcgtaagtttaagtgcactgaatgtgacaaagccttcaaatacaaacaccac
ctgaaagaacacctgcgaatccatagcggagagaagccatacgagtgctcgaactgtaag
aagcgtttctcccattccggctcctacagctcccacatcagcagcaagaaatgcatcggc
ctcatctccgtcaacggccggccgcggccttctccggccacaggaggcgccaaaacccct
cagtgcccttccccatccctgccctcatctcctgccaccgcccgtacccagctcagagac
aaactggaccacgctaagcccctgcaggagcagctcccgctcacacagatcaagtctgag
cccatggactatgagtacaagcctgtggttgtggccccggctgctgggggcgtgaacgga
gttttccagggcggagctgcggccccccttcagggagcagtacaagctgtggttctgcct
actgtgggcctggtctcacctatcagcatcaacctgggtgacctgcagaacatgctgaag
gtggcagtggacgggaacgtgatcaggcaggtgctggagaacgcccagaccaaaggccag
cctgcaggaactgggagagtggcaatcgcccaggctcctcagcaagttatccaagccatt
agtcttcctattgtagaccaggatggaacggccaaaatcatcatcaactacagcttggat
ccatcgcaggcccaggcagccctgcagaacttgaagaaagagcctattggtcagaacact
gacgcctgcaagacagagagactgccagaggacctgaccatcaaaagcaagacaagcaaa
gagaagcctactattactacgggtgaagagaagcagctggagaagtctgtcagtgatgta
tcacccaaacactgtggcaaggaaggacagcagatcaacgggatgcatccggaggagaag
tctggagtagatattggactatgtcctgggaagcctccactgaagaaccttctgtcccta
ctcaaggcttactttgcattaaatgctgagcccaccaaggaggaactggccaaaatctct
gaatcagtcagccttcctaccgaagtggtcagaaagtggtttgagaagatgcaatccggt
cagatttctgtggaaatgtcttctccattgtcgcagaatgagcagaatgctggtgaagat
actgatgaaacaccagaagagctcatcaagttgacacttgagaaagacaaagaaccccag
aagaacctagaagagcaggagatggaactgcatagccctgcagagggcgctacagctggg
ataaatgggacagaaaatggcccagcatccccttcaccactgaacctgtctgcagacggg
cccgtcccagcccggactgcagaggagggtgatggacccctcgatttgtccctccccaaa
tccgccgctgcacctaatgcggctaccactcacgctaacactgtttactcggctcaggac
gagccactgaacttgacttgcacaaagaaggaagcgtccggcatcgcaaacgctagcgct
gccggctatgctaaccaaacaagtgccaatcccataaacattgtgaccactcagctgccc
acactggtggccatcaccgatcagggccacgggcagtgcctacgcgccctcaccaccact
aaacagaccatcctgattccacagctggcctacacctataccactacagcctccagccca
gcagggggcgacacacagcagaagaccatactgcgggtcaacggaatcaaggaggaaaag
ctggagaacacctcagaactggcttcagttttagatgagcagacagactcagactccggc
ccagcgaggaagaagatgaagaagactgagaacggcctgtacgcctgcgacctgtgtgac
aagatcttccagaagagcagctcgctgcttcgacataaatacgaacacacaggtaaacgg
ccccacgaatgtggaatctgcagcaaagctttcaaacacaagcaccatctgatcgagcac
ttgcgtctgcactcaggagaaaagccataccagtgcgataagtgcggcaaacgcttctcc
cactcaggctcctactcgcagcacatgaaccaccgctactcctactgcaagaaagagaac
ctcggccaggaccttctgcagagccccgaggaggaggagaaccagagcgaggagcagcct
cgacctgagagcaccgcgccctcgcctccgtcacaactggactcagatgagcgagggagc
agcgccagggaggacgaggagagcgaggaggaggaggaggaggagatgggctctggcagc
atggtggacgaggacgagatccaggtggtccagatcggagaggagggaggagaagaggag
gatgaggatgaggaggaggagaggatggaggaagaggagatgaccacgacacagaatgga
ggagaggaagagacagtggtggaaacactagtagaagaagaaggaggaggaggaggagaa
gaagaagaagaggatggagagatgatgaaggttgtggtgatgcaggactgcgaggaagag
gaagaggaggaggagcaggacgaacacgaccgagaaagagcaaaagcagaggaacaagca
gaaaacgcagaaccaatggacacgcaggagaacaaggacgagacacaggaacaaactgag
gctgatgaggccggagagaggaacgaaggcgatgaacgaggaggagaagaacttgtgaag
gtgaacggtgcaaatgaaggaaacacacccagtaaaaacagagatgtgaaatga
DBGET
integrated database retrieval system
