Astyanax mexicanus (Mexican tetra): 103037904
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Entry
103037904 CDS
T05042
Symbol
cacna1bb
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04010
MAPK signaling pathway
amex04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103037904 (cacna1bb)
04020 Calcium signaling pathway
103037904 (cacna1bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103037904 (cacna1bb)
Ion channels [BR:
amex04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
103037904 (cacna1bb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
EGF_Hmr-1
Motif
Other DBs
NCBI-GeneID:
103037904
NCBI-ProteinID:
XP_049322384
Ensembl:
ENSAMXG00000012714
LinkDB
All DBs
Position
17
Genome browser
AA seq
2340 aa
AA seq
DB search
MSRMTRFGDEARYGRGAARAGGAPGAPRMYKQSMAQRARTMALYNPKQTKQNCFTVNRSL
FIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPVGDKTPMSERLDDTEP
YFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATVGSDFDLRTLRAVR
VLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGVEFYMGKFHTSCFK
ESGELASDWPCGTEAPSRLCPNGTVCRTYWKGPNYGITNFDNILFAVLTVFQCITMEGWV
DVLYSTNDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKRQEFLKLRR
QQQIERELTGYLEWICKAEEVLLAEEDQNAEEKSPLDGAWYKRKQNNPVLKRAKVKKGKN
DLISAEEGEERFTDISSVAPPGSPFARASLKSSKNDSSSYFRRKEKRVRFFIRRMVKAQS
FYWIVLCIVGLNTLCVAMVHYDQPDWLSQALYLAEFVFLGLFLSEMTLKMYGLGPRNYFH
SSFNCFDFGVIVGSIFEVVWAAIQPGASFGISVLRALRLLRIFKVTKYWNSLRNLVVSLL
NSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDKETPTTNFDNFPAAIMTVFQILTGE
DWNAVMYHGIESQGGVRRGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEE
QQEEAAKKSMALQKAMEVKEVSPMSAANISIAAFVKQNRDVLSRSSSVCSVHSPKEQQRS
LQKLSVWEQRTNQLRRHNLRGSNEALYSELEPEERLRLSSALHLRPDMKAHHDRPLMVEQ
CDGEPRGGDVSEDPASGRKHHRCRGENGEAGEGRHHRHHSRSREHQRGIERSYSQEGAHR
HQHSSRSPEEDREHRHHSHRARGSNGNSNGNGNGNGNGNGNGSGNGNGTIGNGGKGERRP
RGNREGEGGNGDRRRHRPRVKAQSTLDADECMNGERSLGQRDRLTDIEGDGLGSPPQSPT
DPQAGEERQEDSDNLKNSTRAGSTAVNIPVTVTAPPGETTIIPMNNIDGDSLLLSEEKKD
LDELNQIPPKHILPYSSMFVFGQSNPVRRLCHYVVNLRYFEMCILTVITMSSIALAAEDP
VQANAPRNNVLKYLDYVFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVTGALV
AFACSGSKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILF
MFIFAVIAVQLFKGKFFYCTDESKALQKDCRGQFLDYDGDEVSAQPREWKKYEFHYDNVL
WAFLTLFTVSTGEGWPMVLKHSVDATYEDQGPSPGYRMETSIFYVVYFVVFPFFFVNIFV
ALIIITFQEQGDKAMSDCSLEKNERACIDFAINAKPLTRYMPQDKQSYQYKMWKFVVSTP
FEYSILTMIAVNTVVLMMKFHEAPKPYEDMLKWLNIIFTALFTLECILKIIAFGLLNYLK
EAWNIFDFVTVLGSITDILVTEIKQDKLINLSFLRLFRAARLIKLLRQGYTIRILLWTFV
QSFKALPYVCLLIAMLFFIYAIIGMQVFGNIDLNEDTSINHHNNFRTFFQALMLLFRSAT
GEAWHEIMLACLSEKPCDPLSGSSEKECGSEFAYFYFVSFIFLCSFLMLNLFVAVIMDNF
EYLTRDASILGPHHLDEFIRVWAEYDPAACGRISYLDMYEMLRHMSPPLGLGKKCPSRIA
YKRLVRMNMPIADDNTVHFTSTLMALIRTALDIKLASGVLAQRLCDIDLRREINKVWPSL
QPKTVDLLVTPHKHNELTVGKVYAALMIFDYYKQNRAKRLQQQQPSVGPQSKMGALFKPM
LPLTHLHEQELPIKSNKPSPRFHPDTSPQLESSPTAPLLTNGEAVQSQSSAMKKYPSEGI
PQEGGQQRSRNTVQRGYSEDMPNTTKSQELVEMTDMENDSDVGGFSTLEGHGRAASMPKL
SAGFQRSHLRHNTGTYLAPITDMSPMRRSASSLTPQRGGPEVSLRDLDLERPPVTLAPTL
ITQSQERERERAHHHHHHHHRCHRRREKKHKSLDRAISEEQLGSADSPTDQGAEPRERDR
ARERERDRGRSHERKHHSSSAADRKQRYFSCDRYGSREHCHSQSPAPSRSASPGDPLDSN
KFKPATSSAKGSTVVFTSTTTPCRGRRQLPQTPLTPRPAVAYKTANSSPVLLSSARSLGP
GPARLIRGQSEHDSLLSGDAQRPTPVPVTRISSDPSLGPLQRDPHLSEAEDFQDALSTYG
LGRSPRTAATAPLHTATGVGQQSRSGVPNGYHFTLGVSPAPGSSSRVSPSYQEVEKDDWC
NT seq
7023 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggatgactcgctttggggacgaggcgcgctatggcagaggggctgccagggcc
gggggcgcgcccggagcccccaggatgtacaaacagtcgatggctcagagagccaggacc
atggctctatacaaccccaagcagaccaagcagaactgcttcaccgtcaaccgctccctc
ttcatcttcagcgaggacaacgtgatcaggaaatacgccaagaggatcacagagtggcct
ccatttgagtacatgatcctcgccaccatcattgccaattgcatcgtcctggccctggag
cagcacctccctgttggtgacaagacgcccatgtcagaacgtctggacgacacagagccc
tactttatcggaatattctgtttcgaggccggcattaagatcatcgccctgggcttcgtc
tttcacaaaggctcctacctccgcaacggctggaacgtaatggacttcgtggtcgtcctc
actgggattttggcgacagtgggctcagatttcgacctgaggacactgagggctgtccga
gtgctgagacctcttaagctggtgtctggaattcccagtctacaggttgtgctgaagtcc
ataatgaaggctatggttcctctgctgcagatcggcctgctgctcttcttcgccatcgtc
atgttcgccattataggagtggagttctacatgggaaagttccacacctcctgcttcaaa
gagtcaggagaactggcatcagattggccgtgtgggacggaggctccctctagactttgt
cccaatggtacggtgtgcagaacttactggaaaggaccaaactatggcatcacgaacttc
gacaacatcctgttcgctgttctcaccgtcttccagtgcatcaccatggagggatgggtt
gatgtgctgtatagcaccaatgatgcttcaggcaacacgtggaactggctgtacttcatc
cccctcatcatcatcggctccttcttcatgctcaacctggttctgggtgtcttatcagga
gagtttgccaaagagagagagcgtgtggagaagagacaggagttcctgaagctgcggaga
caacagcagatcgagagagagctcactggttatctggagtggatctgtaaagcagaggaa
gtgctgctggctgaggaggatcagaatgctgaggagaaatctccgctggatggtgcatgg
tacaagaggaaacagaacaacccagttctgaaaagggcgaaggtgaagaagggtaagaat
gacctcatcagtgctgaggagggagaagaacgcttcacagacatttcctctgttgcaccc
cctggatccccctttgcccgagcgagcctgaagagcagtaagaacgacagctcctcgtat
ttccgccgcaaagaaaagagggtgcgcttcttcatccgccgcatggtcaaagcgcagagc
ttctactggatcgtgctgtgcatagtgggtctgaacacactgtgtgtggccatggttcac
tacgaccagcctgattggctctcccaagcgctgtacctggctgaatttgtgttcctgggt
ctgttcctgtctgagatgactctgaagatgtacggccttgggcccaggaactactttcac
tcctcgttcaactgctttgactttggggtcatcgtggggagtatattcgaggtggtgtgg
gcagcgatccagccgggagcctcgttcggcatcagcgtgctgagagctctgcgcctgctg
aggattttcaaagttacaaagtactggaactctctgaggaacctggtggtgtctctgctc
aactccatgaagtccatcatcagtttgctcttcctgctcttccttttcatcgtagtcttt
gctcttctaggcatgcagctctttggaggacagtttaactttgataaagaaacgcccact
acaaacttcgacaacttcccagcagccataatgacggttttccagattctgactggagag
gactggaatgcagtgatgtatcatgggattgagtctcaggggggcgtgagacgtgggatg
ttttcttctatttacttcattgttctcactctttttggaaactatactcttcttaatgta
ttcttggctatcgctgtcgataacctcgccaatgctcaggagctgacaaaggatgaagag
cagcaggaggaagctgccaagaagagcatggccctgcagaaggccatggaagtgaaggag
gtcagccccatgtctgcagccaacatctccatagcagcttttgtaaagcaaaatcgagat
gtgctctctcgcagctcttccgtctgcagcgttcactcacctaaggagcagcagcgctca
ctgcagaagctgtcagtgtgggagcagcgcaccaaccagctccgccgccacaacctgcgc
ggcagcaatgaggcgctgtacagcgagctggagcccgaggagcgtctccgcctgtcctcc
gccctgcacctgcggccggacatgaaggcgcaccacgaccggcccctgatggtggagcag
tgcgacggcgagccccgaggtggagatgtctcggaggatcctgcatcagggagaaagcac
caccgctgcagaggggagaacggggaggcgggagaaggccgacaccatcggcaccacagc
cgcagccgggagcaccagcggggtatagaacgcagctacagccaggaaggagctcacaga
caccagcactcgtcacgttctccagaagaggacagggagcatcgccaccactcccacaga
gccagaggttccaacggcaatagtaacggcaacggcaatggcaatggtaacggcaatggc
aatggaagcggcaacggaaacggcaccattggtaatggtggaaagggggagcgcaggcca
cgggggaacagggaaggtgaagggggcaatggagaccggaggcggcacaggcccagagtc
aaagcacagtccacactggacgcagatgagtgtatgaatggagagagatccctgggtcag
agggacagactgaccgatatagaaggagacggtctgggcagccccccacagtcccctact
gatccacaggctggagaagagcggcaagaggactcagataacctgaagaacagcaccaga
gctggatctactgcagtcaacatccctgttactgtcactgccccacctggagaaaccacc
atcatccccatgaataacatagatggtgacagtctgctgctgagtgaagaaaagaaggat
ttggatgagctgaatcagatccctcccaaacacatcctaccctacagctccatgttcgtg
tttggacagtccaaccctgttcggcggctgtgtcactacgtggtgaacctgcgctacttt
gagatgtgtatcctcacggtcatcaccatgagcagcatcgcactggctgctgaagacccg
gtgcaggcgaacgcccccaggaataatgtgcttaaatacctagattacgtcttcaccgga
gtgttcacatttgaaatggtgataaagatgattgacctgggtctgctgctccatcctggc
tcctacttcagagacctgtggaacattctggacttcatcgtggtcactggcgccctggtg
gctttcgcctgctcaggttctaaaggaaaggacatcaacaccatcaagtccctgcgagtg
ctgcgagtgctgagaccacttaagaccatcaagaggcttcctaaactgaaggcggtgttt
gactgtgtggtgaactctctgaagaatgtgttgaacatcctcatcgtctacatcctcttc
atgttcatcttcgccgtcatcgctgtgcagctgtttaagggcaagttcttctactgcaca
gacgagtccaaagctctgcagaaagactgcaggggtcagtttctggattatgatggggat
gaggtgtccgctcagccgagagagtggaagaaatacgagtttcactacgacaacgtgctg
tgggccttcctgaccctcttcactgtgtccactggagagggctggccaatggtgctgaaa
cactctgtggacgccacctatgaggatcagggcccaagcccgggctaccgcatggaaacg
tccatcttctacgtggtctacttcgtggtcttcccgtttttcttcgtcaacatattcgtg
gccttgatcatcatcacgttccaggagcagggggacaaggccatgtctgactgcagcctg
gagaagaacgagcgggcttgtattgactttgccatcaatgctaaacccctgacccgctac
atgccccaggataaacagtcctaccagtacaagatgtggaagtttgtggtctcgacgccc
ttcgagtactccatcctgactatgatcgccgtcaatactgttgttctcatgatgaagttc
catgaagccccaaagccctacgaggacatgctgaagtggctgaacatcatcttcactgcc
ctctttaccctggaatgcatactgaagatcatcgcctttggcctgctgaactacctgaag
gaggcctggaatatttttgactttgtgacggtactgggcagcattactgacatcctggtc
actgagatcaagcaggacaagttgatcaatctgagtttcctgagactgtttcgagctgct
cgcctcatcaagctcctgaggcaaggctacaccatccgcatcctgctgtggaccttcgtc
cagtcctttaaggctcttccttatgtgtgtctcctgattgccatgctcttctttatctac
gccatcattgggatgcaggtgtttggaaacatcgatttaaatgaagacacatccatcaac
caccacaacaacttccgcactttctttcaggccctcatgctgctgttcaggagtgctacg
ggtgaggcgtggcatgagatcatgttggcgtgtttgagtgaaaagccgtgtgacccgctc
tcaggctccagtgaaaaggagtgtggcagtgaatttgcatatttctacttcgtctccttc
atcttcctctgctcattcttgatgctgaatctcttcgttgctgtcatcatggacaacttt
gagtatttgacccgagacgcctccatccttggacctcaccacctggacgagttcatccgc
gtctgggcagagtacgaccccgctgcctgtgggcgcatatcctacctggatatgtatgaa
atgctccggcacatgtcccctccgctaggtttgggaaagaaatgtccatcgagaattgcc
tacaagcgcttggtgaggatgaacatgcccattgcggatgacaacacagttcacttcaca
tccacgctgatggctctcatacgcaccgccctggatatcaagctggcatcaggtgttctg
gctcagagactgtgtgatattgatctgaggagagagattaataaagtgtggcccagtctt
cagcccaagacagtggacctgctggtcacccctcataaacataatgagctgacggttggg
aaggtctatgctgccctgatgatttttgattactacaagcagaatcgagcaaagaggctc
cagcagcagcagccgtctgtcggtccacagagtaaaatgggggcactcttcaagcccatg
cttcccctcacccacctacacgaacaagagcttcccatcaagagtaataagccttccccc
cgttttcatcctgacacatctccacagctagaatcttcacctacagcccctctcctgact
aacggggaggcagtgcaaagccagagcagtgccatgaaaaagtatccctcagaaggtata
cctcaggaaggagggcagcagaggagcaggaatacagtccagcggggctattccgaagac
atgccaaacacaaccaaatctcaggaattagtagagatgacggatatggagaatgattct
gatgtagggggcttctccacactggagggccacgggagggcagcctcaatgcccaaactt
agtgcgggcttccagcggagccacttacgccacaacaccgggacgtacctagcacccatc
acagatatgagccccatgcggcgctcggcctcctctctgacccctcagagaggtgggccg
gaggtcagtctgagggatttggatctggaacggcctccggtgaccctcgcccccaccctg
atcacccagagccaggagagagagagggagagagcgcatcaccatcatcaccaccaccac
cgctgccaccgccgcagagagaagaagcacaaatcactggaccgagccatcagcgaggag
cagctgggctctgctgattcaccgacggatcagggcgctgagccgagggagcgggaccgt
gctcgtgagcgtgagcgggaccgcggacgctctcacgagaggaagcaccactcgtcctca
gcggcggaccggaagcagcgctacttctcctgcgatcgctacggcagccgagagcactgc
cacagccaatcacccgcccccagcagatccgcatcaccaggagatccactcgactccaac
aaattcaaaccggccactagctcagctaagggcagcacggtggtctttacctcaaccact
acaccgtgccgcgggcgccgtcagctgccccagacccccctcaccccgaggccagcggtg
gcctataagactgccaactcctccccagtgctgcttagctccgcccgctcgctcggcccg
ggacccgcccgcctcatccgcggccaatcggagcacgactccctgctcagcggtgacgcc
cagcgccccacccccgtgcctgtcactcgcatcagctccgaccccagcctgggtcccctg
cagagagacccccacctgtcagaggctgaagacttccaggacgcgttaagcacgtacgga
ttggggcgctcccccaggactgctgccaccgcccccctccacacggccaccggggtgggc
cagcaaagccggagcggcgtccccaacggatatcacttcactttaggagtgagcccagcc
ccggggtccagcagcagggtctccccgagctaccaggaagtggaaaaagatgactggtgc
tag
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integrated database retrieval system
