Astyanax mexicanus (Mexican tetra): 103037989
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Entry
103037989 CDS
T05042
Symbol
puf60b
Name
(RefSeq) poly(U)-binding-splicing factor PUF60-B isoform X1
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103037989 (puf60b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103037989 (puf60b)
Spliceosome [BR:
amex03041
]
Complex A
U2 snRNP components
U2 related factors
103037989 (puf60b)
Complex B
103037989 (puf60b)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
103037989
NCBI-ProteinID:
XP_022533766
Ensembl:
ENSAMXG00000041030
UniProt:
A0A3B1KCF9
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Position
8:complement(39689014..39701641)
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AA seq
512 aa
AA seq
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MENGQGMGSKLGLPPLTPEQQEALQRAKKYAMEQSIKSVLVKQTIAHQQQQLTNLQMAAV
TMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWD
SVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPGNIGQAQPIIDQLAEEAR
AYNRIYVASVHPDLSDDDIKSVFEAFGKIKSCMLAREPTTGKHKGYCFIEYDKPQSAVDA
VSSMNLFDLGGQYLRVGKAVTPPMPLLTPTTPGGLPPAAAVAAAAATAKITAQEALVTPA
QLLSQQMGLPQAVLAAQAPGLITGVTPVRPTLPMVPQVGLVNPVLASPPVTSSTSTGTPT
TTTQQPPAEPKKETEEKKREENAAWVDGLGKESANEQQPVGGSGSKNAAALSGSTVMVLR
NMVGPEDIDDDLEGEVTEECGKFGAVNRVIIYQERQGEEDDAEIIVKIFVEFSDSEEMNK
AIQALNNRWFAGRKVVAEVYDQQRFNNSDLSA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggagaatggtcaaggcatgggctccaagctgggcctgccgcccctcactccggagcag
caggaagcactgcagagggcaaagaaatatgccatggagcagagcattaagagtgtcctg
gtcaaacagacaatagcccaccaacagcagcagctaacaaacctacagatggcagcagtg
actatgggctttggagatcctctctcacctttacaatcggtggcagcacagaggcagcga
gctctggcaatcatgtgtcgagtctatgtggggtccatctattacgaacttggcgaggac
accattcggcaggcctttgctccgttcggtcccatcaagagcattgacatgtcctgggac
tctgtcaccatgaagcacaagggctttgcctttgtggagtatgaggtgcccgaagctgct
cagctggccctggagcaaatgaactcagtcatgctgggtgggaggaacatcaaggtgggg
cggccaggtaacatcggacaggcacaacccatcatcgaccaattggcagaggaggcgcgc
gcatacaaccgcatctatgtagcctcagtgcacccggacctgtctgatgacgacatcaag
agcgtcttcgaggccttcgggaagattaaaagctgcatgctggcccgagagcccaccaca
ggaaagcacaagggctactgctttatcgaatacgacaagcctcagtcagcggttgatgca
gtgtcctccatgaacctttttgatcttggaggtcagtacctgagggttgggaaggctgtg
actcctccaatgcccctgttaacccccacaacacctggaggtttgcctcctgctgcagct
gttgcggctgcagctgccaccgctaaaatcacagctcaggaggcattggtgactcccgcc
cagctcctcagccagcaaatgggccttcctcaggcagtactggcggcccaggccccgggc
ttaattacaggtgtgacacctgttcgaccaaccttgcccatggttcctcaggtaggcctg
gtaaaccctgtgctggcctcaccaccggtcacatccagcacatccacagggacaccaaca
accaccacacaacagccacctgctgagcctaaaaaggaaactgaagagaagaagcgggag
gagaatgctgcctgggttgatggtctgggaaaggagagcgcaaatgaacaacagccagtt
ggaggaagtggaagcaaaaatgcagccgcactatctgggtccacagtaatggtgttgcgc
aacatggtgggacctgaggacatcgacgatgacctggagggggaagtgacggaggaatgc
ggaaaatttggcgctgtgaaccgagtcatcatctaccaggaacgacagggggaagaggat
gatgccgagatcatcgtgaagatatttgtggagttctccgacagtgaagaaatgaacaag
gccattcaggcccttaacaaccggtggtttgcaggccgtaaagttgtggccgaggtctac
gatcagcagcggttcaataatagtgacctctctgcatag
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