Astyanax mexicanus (Mexican tetra): 103038180
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Entry
103038180 CDS
T05042
Symbol
prdm11
Name
(RefSeq) zinc finger protein 862 isoform X1
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103038180 (prdm11)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
103038180 (prdm11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
SET
Zn_ribbon_PRDM4
FOG1-like_PR
Motif
Other DBs
NCBI-GeneID:
103038180
NCBI-ProteinID:
XP_007235218
Ensembl:
ENSAMXG00000017602
UniProt:
A0A8B9J963
LinkDB
All DBs
Position
2:complement(47855943..47869766)
Genome browser
AA seq
1139 aa
AA seq
DB search
MADSATFQTEPCTETEPDCRTGVINESSSEEPNKKLKVNHERCAKVGQQNVDFWFCEECK
EPFLKECPIHGPPVFVPDTPVSLGVPDRAALTVPSGIEIIKKGQEVDVCCMDENIPRGAL
FGPYQGQLIAQDKQSGTHSWMIVNEDNTYKSIDGCDETRANWMRYIRMSSEESERNLSAF
QHGEHIYFRVCRRLKMRERLRVWYSDDYMKRLQSVSQDSIDRNLETGSKLEDHTHHHEET
QGPILRSALHGRRTLSKHGSDEPDSQPQPKKKKIDLIFKDVLEASLEASQKQDNPLNSTL
SLPRSRSQVSNAFNQSGSFSHHVAESLFCQTENKVVVVSAGLAPVEQLEGCLDERYVKME
EAEEEPAVTNDGPSTSFCPNCVRLKRRIRELEAELLRFKQQEQAEILAPSEPLPSDEIRA
VEAMTPIPVVLEEDDQDVDSADESIAADMMVATDDTSKLSVGPGRRIRRFKQEWLKKFWF
LRYSPTLNEMWCHVCRQYTVQSSRTSAFIIGSKQFKIHTIKLHSQSNLHKKCLQLYKLRM
HPEKTEEMCRNMMTLFNAAYHLAVEGRPFSDLRPLAELLKKCELKVVDQYMNESDCQILI
HHISRAFNEDLAEKIRLSPFLGVIMDGQNDDLLADTVAVYVQFLTAEGPPATEFLSLQRL
GGGNVDGYLQAVDRAFGVLGLRFQDMLVVGLAVDGSNISSNLRANLYITVRKIIPFVLCL
PVMIHRPHLEILDAICGKELSCLDDLENNLKQLLSFYRYSPRMMAELRTTAPTLSEETEF
LGDIRAIRWIIGEPNVLNALIKDYLEVVTHLKSISNQTQRGDASAIALSLLQFLMDYQSV
KLIYFLLDIIAVLSRLAFIFQGDYLLVSQVDAKIEEAIQEIGQLVDSPGEYLQEFEENFR
ESFNGVDLKNLRVAESKFQSIREKICQKSQGILAQRIDQCSHSIVQACRVLDLTSWPLNR
DDLRTFGEEEILLIFDHLETIPSPVRELSQDRIDVRGSLVGEWRDLKTDYYSMNGFKEVM
SHICRYKQRFPLLNQILQLVRVLPTSAACSDKGRGSLQKVRRNNRSRLTLEQMNDLLTLA
VNGPPIANFDGKRPLDSWFEEKSGNSYTLSTEVLARMSNTEQKPVLHTMDVNSEFYPDI
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggcagactctgccacctttcagactgagccatgcacagaaactgagccagactgcaga
acaggagtcatcaatgagagttcttctgaagagccaaacaagaaacttaaagtcaaccat
gagcgctgtgccaaagttggacaacaaaatgttgacttctggttctgtgaagaatgtaag
gagcctttcctgaaggaatgccctatccacggtccccctgtgtttgtacctgatactccc
gtttcactgggtgtgcctgatcgtgcagctctcactgtcccttcaggcattgaaatcatt
aagaagggccaggaggtggatgtttgctgcatggatgagaacatcccaaggggagcactc
tttggtccttaccaaggccaactgatcgctcaggacaaacagtcagggacgcactcgtgg
atgattgttaatgaggacaacacctacaaatctattgatggctgcgatgaaactagagca
aattggatgagatacattcggatgtcttcagaagagagtgagagaaacctgagtgcattc
cagcatggtgaacacatttactttcgcgtgtgccgcagacttaagatgagagagaggctt
cgtgtgtggtacagtgatgactatatgaaacgactgcagagtgtatcccaggacagtatc
gaccgcaatctggagacagggtcaaaattagaagatcacactcatcaccacgaagaaact
caaggcccaattctccgctcagctttacatggaagaagaaccctcagcaagcacgggagt
gatgagccagacagccaaccgcaacccaagaaaaagaagattgatctcatattcaaagat
gtcctagaggcatcactggaagcaagccaaaagcaagacaatccactgaacagcactttg
tcattaccaagatcaagatcacaagtcagcaatgcctttaaccagtccgggtcgttttcg
caccatgtagcggagtcattattttgccaaactgaaaataaagtggttgttgtttccgct
ggactggcccctgtggagcagctagagggttgccttgatgagcgatatgtcaaaatggag
gaagcagaggaagagcctgctgtgactaatgatggcccgtcaacatctttctgcccaaac
tgtgtgagactaaagagacggatacgtgaactggaggcagagctactccgctttaaacag
caagagcaggctgagatattggcaccatctgagcctctgcccagtgatgaaattagagca
gtggaggccatgacacctatcccagtcgtgttggaagaagatgaccaggatgttgactcc
gcagacgagtccatagctgctgacatgatggtagctaccgatgacacttccaaactatct
gttggtccgggcaggaggatccgccgcttcaagcaagagtggttaaagaagttctggttc
ctacgttactctccgacattaaacgagatgtggtgccatgtgtgtcgccagtacaccgtc
cagtcctcaagaacgtccgctttcatcattggctccaaacagttcaagattcataccatt
aagctccacagtcagagcaacctgcacaagaagtgtctgcaattgtacaagctgcgcatg
catcctgagaagacagaggaaatgtgtcggaatatgatgacgctcttcaatgctgcctac
catcttgcagttgaaggacggccattctcagaccttcgacccttggccgagctgctgaag
aagtgtgagctgaaagtagtcgatcagtacatgaatgagagcgactgtcaaattctcatc
caccacatttctcgggcatttaacgaggacttggcagaaaagatccgtctctcacctttc
cttggtgtaatcatggatggacagaatgatgatttactcgcagatactgttgcagtttac
gtgcagttcctaacagcagagggtccacctgcgactgagtttctctctttgcagaggttg
ggtggaggcaatgtagatggctatctccaggctgttgaccgtgcctttggtgtcctaggc
ttgaggtttcaggacatgcttgtggttggtttggcagtagatgggtctaacatctcctct
aacctcagagcaaacctctacataaccgtacggaagatcattccctttgtcttgtgtcta
ccagtgatgatccatcgtccccatttggagatactcgatgccatatgtgggaaggaactt
tcatgtttagatgatttggagaacaacttgaagcagttgctgagcttctacagatattcc
cctcgcatgatggcagagttgaggacaacagcacctactttgtcagaggagaccgagttc
cttggggatataagagcaattcgttggatcattggggagcctaatgtcctaaacgccctc
atcaaggactacctggaagtggtcacccatcttaagagcatcagcaaccagactcagaga
ggagatgcatcagccattgctttgtctcttctgcagtttcttatggactaccaatccgtc
aagctcatatatttcctcttggacatcattgctgtcctgtcacgccttgccttcatcttt
caaggagactatcttttagtgtcccaagtggatgccaagatcgaggaggccattcaggag
atcggccagctggttgattctccaggagagtacttgcaagagtttgaggaaaactttcgc
gagagcttcaatggtgtagacctgaagaacctgcgagtggctgaatccaagttccagtcc
attcgggaaaagatctgccaaaagagccagggcattctagcacaacgcattgaccagtgc
agtcactccattgtgcaggcttgcagggttcttgatctgacatcttggccactcaacagg
gatgacctcagaacctttggggaggaagagatcttgctgatctttgaccatctggagacg
attccctcgccagtgcgtgagcttagccaggaccgaattgatgtacgaggaagcctggta
ggagaatggagggatctcaagactgactattacagcatgaatggctttaaggaagtgatg
agtcatatctgcagatataaacagcgctttccattgctcaaccaaatcctgcagctggtc
agggtcctgccaacgtcagctgcctgtagtgacaaaggacgagggtctttacaaaaagtc
cggaggaacaaccgctccaggctcactttggagcaaatgaatgacctgctcaccctggct
gttaatggcccccctattgccaactttgatggcaagaggccattggacagctggtttgag
gagaagtcagggaacagctacacactttccacggaagtgctggccagaatgtcaaacacc
gaacaaaagcctgtgttgcacacaatggatgtgaattcagaattttatcctgatatttga
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integrated database retrieval system
