Astyanax mexicanus (Mexican tetra): 103038205
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Entry
103038205 CDS
T05042
Symbol
rorb
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103038205 (rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
amex03310
]
103038205 (rorb)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
103038205 (rorb)
Nuclear receptors [BR:
amex03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
103038205 (rorb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
TraC
DUF4355
Motif
Other DBs
NCBI-GeneID:
103038205
NCBI-ProteinID:
XP_022523977
Ensembl:
ENSAMXG00000018669
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Position
22:complement(7708360..7767094)
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AA seq
467 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQQTGEAEALA
RVYSTGLSSGLGSLGHDLGSAYANGHLIDMPKGQANGAPPGYYGMDSTQPSPDQSGLDMA
GMKQIKQEPIYDLTPVPNLFPYSSYQDSQLAPGVSMGELDRIAQNIIKSHLETCQYTAEE
LQQLAWQTHSYEEVKMYQSKSREVLWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQIL
LLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVSAVFDFAKSLCSLQ
LTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHMDEDALAKLIGRI
PTLAALCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDAAGVMPK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcccaaattgaagttataccatgcaaaatctgcggagacaaatcctcagggatc
cattacggggtcatcacgtgtgaggggtgtaagggtttcttcaggaggagtcaacagaac
aacgcctcctactcctgccctcgccagcgcaactgtctgatcgacagaaccaaccggaac
cgctgccagcactgcagactgcagaaatgcctcgctctgggaatgtcccgcgatgcggtg
aagttcggccgtatgtctaagaagcagcgggactcgctgtacgccgaggtgcagaagcac
cagcagcgcctgcaggagcagcggcagcagcagcagacgggcgaggccgaggccctggcc
cgggtctactccaccggcctgtcgtccggcctgggcagcctcgggcatgacctcggcagc
gcctacgccaatggccacctcatagacatgcccaagggccaggccaacggagccccgccc
ggctactacggcatggactccacccagcccagcccggaccagtccggcctggacatggcc
ggcatgaagcagatcaagcaggagccgatctacgacctgacgcccgtgcccaacctcttc
ccctacagctcgtaccaggacagccagctggcacccggggtctccatgggggagctggat
cgcatcgcgcagaacatcattaagtcccacctggagacgtgtcagtacacagccgaggag
cttcagcagcttgcctggcagacgcactcgtacgaggaggtcaagatgtaccaaagcaag
tcgagggaggtgctgtggcagcagtgtgcaatccagataactcacgccattcagtacgtg
gtggagttcgccaagcgcatcaccggattcatggagctctgtcagaacgaccagatactg
ctgctcaaatcaggttgtctggaggtggtgctggtccggatgtgccgggcgtttaacccc
ctcaacaacacggttctgttcgaggggaaatacggaggcatgcagatgtttaaagcactc
ggctgtgacgatctcgttagcgcagtgttcgacttcgcgaagagcctgtgctctctgcag
ctgacggaggaggagatcgccctgttctccgctgctgtgctcatctccacagatcggccc
tggctgatggaacctagaaaagtacagaagctccaggagaagatatattttgctctccag
cacattatgcagaagaaccacatggatgaggatgcactggctaagctgattggtcggatc
cccacactggctgcactgtgcactctgcacacggaggagctgcaggccttccagcagtta
caccctgagacggtcaacgtgctcttccctccgctctataaggaactcttcaaccctgac
gctgccggcgtcatgcccaagtga
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