KEGG   Astyanax mexicanus (Mexican tetra): 103038205
Entry
103038205         CDS       T05042                                 
Symbol
rorb
Name
(RefSeq) nuclear receptor ROR-beta
  KO
K08533  RAR-related orphan receptor beta
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:amex03000]
    103038205 (rorb)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:amex03310]
    103038205 (rorb)
Transcription factors [BR:amex03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    103038205 (rorb)
Nuclear receptors [BR:amex03310]
 1. Thyroid hormone like
  1F. RAR-related orphan receptor
   103038205 (rorb)
SSDB
Motif
Pfam: zf-C4 Hormone_recep TraC DUF4355
Other DBs
NCBI-GeneID: 103038205
NCBI-ProteinID: XP_022523977
Ensembl: ENSAMXG00000018669
LinkDB
Position
22:complement(7708360..7767094)
AA seq 467 aa
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQQTGEAEALA
RVYSTGLSSGLGSLGHDLGSAYANGHLIDMPKGQANGAPPGYYGMDSTQPSPDQSGLDMA
GMKQIKQEPIYDLTPVPNLFPYSSYQDSQLAPGVSMGELDRIAQNIIKSHLETCQYTAEE
LQQLAWQTHSYEEVKMYQSKSREVLWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQIL
LLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVSAVFDFAKSLCSLQ
LTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHMDEDALAKLIGRI
PTLAALCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDAAGVMPK
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgcgagcccaaattgaagttataccatgcaaaatctgcggagacaaatcctcagggatc
cattacggggtcatcacgtgtgaggggtgtaagggtttcttcaggaggagtcaacagaac
aacgcctcctactcctgccctcgccagcgcaactgtctgatcgacagaaccaaccggaac
cgctgccagcactgcagactgcagaaatgcctcgctctgggaatgtcccgcgatgcggtg
aagttcggccgtatgtctaagaagcagcgggactcgctgtacgccgaggtgcagaagcac
cagcagcgcctgcaggagcagcggcagcagcagcagacgggcgaggccgaggccctggcc
cgggtctactccaccggcctgtcgtccggcctgggcagcctcgggcatgacctcggcagc
gcctacgccaatggccacctcatagacatgcccaagggccaggccaacggagccccgccc
ggctactacggcatggactccacccagcccagcccggaccagtccggcctggacatggcc
ggcatgaagcagatcaagcaggagccgatctacgacctgacgcccgtgcccaacctcttc
ccctacagctcgtaccaggacagccagctggcacccggggtctccatgggggagctggat
cgcatcgcgcagaacatcattaagtcccacctggagacgtgtcagtacacagccgaggag
cttcagcagcttgcctggcagacgcactcgtacgaggaggtcaagatgtaccaaagcaag
tcgagggaggtgctgtggcagcagtgtgcaatccagataactcacgccattcagtacgtg
gtggagttcgccaagcgcatcaccggattcatggagctctgtcagaacgaccagatactg
ctgctcaaatcaggttgtctggaggtggtgctggtccggatgtgccgggcgtttaacccc
ctcaacaacacggttctgttcgaggggaaatacggaggcatgcagatgtttaaagcactc
ggctgtgacgatctcgttagcgcagtgttcgacttcgcgaagagcctgtgctctctgcag
ctgacggaggaggagatcgccctgttctccgctgctgtgctcatctccacagatcggccc
tggctgatggaacctagaaaagtacagaagctccaggagaagatatattttgctctccag
cacattatgcagaagaaccacatggatgaggatgcactggctaagctgattggtcggatc
cccacactggctgcactgtgcactctgcacacggaggagctgcaggccttccagcagtta
caccctgagacggtcaacgtgctcttccctccgctctataaggaactcttcaaccctgac
gctgccggcgtcatgcccaagtga

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