Astyanax mexicanus (Mexican tetra): 103038300
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Entry
103038300 CDS
T05042
Symbol
si:dkeyp-9d4.3
Name
(RefSeq) caskin-1 isoform X1
KO
K21952
CASK-interacting protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103038300 (si:dkeyp-9d4.3)
Membrane trafficking [BR:
amex04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
103038300 (si:dkeyp-9d4.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SAM_2
Ank_5
Ank_3
Caskin-tail
Caskin1-CID
SH3_2
SH3_9
SH3_1
Motif
Other DBs
NCBI-GeneID:
103038300
NCBI-ProteinID:
XP_049325807
LinkDB
All DBs
Position
21:17490050..17579094
Genome browser
AA seq
1569 aa
AA seq
DB search
MGKDQELLQAVKTEDLLTVQRLLQRPRQGKSKLLGSAKRVNVNFQDTDGFSALHHAALNG
NLELISLLLESQAIVDIKDQKGMRPLHYAAWQGKCEPMKMLLKAGSSVNGQSDEGQIPLH
LSSQHGHYDGSEMLLQHQSNPCIRDHAGKTPLDLACEFGRVSVVQLLLSSNMCAAMLEPK
PSDPNGISPLHLAAKNGHIDIIKLLIQAGIDINRQTKSGTALHEAALCGKTDAVRLLLDS
GISASVRNTYCQTALDIVNQFTTTQASREIKQMLRDASAAMQVRALKDYCNNYDLTSLNI
KAGDIITVLEQHSDGRWKGCIHDNRTGNDRVGYFPSNMVEVIKRAGPSTQQYLKIQIRPP
AIGSVAMVNGDSSHILSLPLTPPPPPTLISPHQPLFTSFGYNTPTCSSFAFEPPSSSSSR
SEEPKKETGSRGSVSSPHGSPTLSGQQSSANEEIWVLRKPLAGGGGGSSGSMGSTGSLTS
GRSSVSGPMDNANAHLTNSPVPVPTTPTHSPGLNTHGLNVPGLHAQAEGVKLLATVLSQS
AKAKEHLLETRSMDHNTASSPLTQSAPGGPRPEKKKPFVDPLLQRKDSTSVESKSSEAVA
EWLTSAQLQFYTTNFLTAGYDLQTVSRMTPEDLTAIGVTKPGHRKKMLSEISKLNVPDWI
PKEKPANLAEWLSLIGLSQYYQTLVQNGYDNMDFVSDITLEDLQEIGITKLGHQKKLMLA
VNRLSEPLREDEAPNKEIQSEESTDSKQPATVEVISSTPEPKSVPAPRMRKGSEGRGSPR
HTAQGRGLQRANIPPPLKRPGSYESPTHTPPHTPTKGKTTSPHTSSPTHAPGSPLRMQSR
PRGPSDCPRSHAHSRAVPLLCLPPEGGTVDEEDHTPPLPRRVPRSATPAVPEVLECSKED
LPLPDSSVKYATLGVVNRNSSSKSPSDNLDVGVVNRSQSFATTRPRRRTRPPTPPKRSCS
SISTGNLADEAALSNESGGGQGEHSDSFLSVTYRERRRSDCGIASESTSSGGSVRDIAAM
LEMSKLGGGGKGTGNNYLQASPDLLRRNRDALSSDDDMQSRRRTISGPVTGYTDSHPNNT
REGTTSNTYTTQAALEATRIMEEAAPQQQVPLRQAPEPRPRSMLSHLEGGVPSLPQEEWS
RMDATATLRRPRPPHDSDSERFQLTETSTIRRRPKALATPQKDIENGPESSRRRPVSEAC
AGDVSGSDRELRPDDFRRVLRPPVSPKPSLALRKMDPPTPTRRVPLPGPEGQHSPVDGKK
VPPPVSPKPSPPPTLPKPMKIKPVQTPGSSAAPHPQIVTTPSGLNTHMPSPTAVHPEQVE
YPTLSPVIPKPPEAHTLSPRAATSPAQSPQTPQTPQTPQTPSTPGSGSAPVKPPRSSMAG
LSVDIPGPLEVELAGVEAVQHRLRDVERQRDEDDRRREKIEDRMDGGCQSQTKRASVEGQ
GEHGDVDLIRSAEGSGQVVMRRRKVGMARQPQVEGELEGVRQDIKAEALQQMALEAEARG
MFGDQAAGDMTHLRLEETSASLAAALEVVEEKIKKEDNSVVENKATVNILDDIGSMFDDL
ADQLDAMLD
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagatcaggaactcttgcaggcggtgaaaaccgaggacctgctgacggtccag
cggctcctgcagagacccagacagggcaaatccaagctcctgggttctgcaaagagagtg
aatgttaatttccaggacacagatgggttctcagctcttcaccatgctgctctgaatggt
aatttggagctgatctcactgttgctggagtcacaagccattgttgacatcaaagaccag
aaagggatgcggccgctgcactacgctgcctggcaaggaaaatgcgagccaatgaaaatg
ctgctaaaagctggatcatcggtcaacggccaatcagacgaaggccagattcctctgcac
ctctcgtcccaacacggccattacgatgggagcgagatgctgctgcagcaccagtccaac
ccctgcatccgagatcacgcaggaaagacccctctggacctggcctgtgaatttggacga
gtttcggtggtccagttgcttctgagcagtaatatgtgtgctgccatgctggagccgaag
ccctctgaccccaatggcatcagccctctccatctggccgccaagaacggacacattgac
atcatcaagttattgatccaagctggaatagatataaacaggcagacaaagtcaggcaca
gcgctgcacgaagctgccctttgtggaaagaccgatgctgtacggctgcttctcgatagt
ggcattagtgccagcgtgaggaacacttactgccagacggcactggacatcgttaaccag
ttcaccacaacacaagccagtcgagagattaaacaaatgttgagagatgcttccgctgcc
atgcaagtgagagcgctgaaggattactgcaacaactatgacctgacgagcctcaacatc
aaagcgggtgacatcatcacggtcctggagcagcactctgacggccggtggaagggctgc
atccatgacaaccggacggggaacgaccgcgtcggctacttcccctccaacatggtggag
gtcatcaagagggcaggaccctctactcaacagtatcttaagatacagatccgtccgccg
gcaattggctcagttgccatggtgaacggtgactcctcccacattctctctctgcccctg
actcccccgccccctcctaccctgatctctccccatcagcccctcttcacctcattcggg
tataacacacccacctgcagctcatttgcgttcgaaccgccctcctcctcctcctcccgc
tcagaggagccgaaaaaagagacaggttccagagggtccgtgtctagcccacatggttct
cctactctaagtggtcagcagagcagcgccaatgaggagatatgggtactacggaaacct
ctggctggcggtggtggcggcagcagtggcagcatgggcagtacaggcagtctgacaagc
ggccgctcgtccgtcagcggtccgatggacaatgcaaacgctcacctcaccaactcacct
gtgcctgtgccaactacccccacacattcaccagggctcaacacacacggcctcaacgtg
ccaggactgcacgcgcaggcggagggggtgaagttgttggccacagtgttgtctcagtca
gccaaagcgaaagaacatctgctggagacacgctctatggatcacaacacagcttcctca
ccgctcactcagagtgcacctggaggcccccgtccagagaagaagaaaccatttgtggat
cctttactacagaggaaggatagcacttcagtggagagtaaaagttcagaggcagtggct
gaatggctcactagtgctcagctgcagttttacaccacaaacttcctgactgccggctat
gacctacagaccgtcagtaggatgactccagaggatctgacagcgattggagtaacgaaa
cctgggcacaggaagaaaatgttgtcagaaattagcaaactgaacgtccctgactggata
cccaaagagaaacccgctaatctggcagagtggttgtctttgattggcctgagtcagtac
taccagactctagttcagaatggctatgacaacatggacttcgtaagtgacatcaccctg
gaggatctacaggagatcggcatcaccaaactgggacatcagaagaaattaatgttggct
gttaatagactgagtgagcctctaagggaggatgaagctcccaacaaggagatccaatca
gaagaaagcacagattcaaaacaaccagccactgtagaggtgatcagcagcactccagag
cccaaatcggtgccggcaccaaggatgcgcaagggatcggagggccgtggctctcccagg
cacacggcacaagggaggggcttacagagggcaaacatccctcctcctcttaagaggcct
ggatcttacgaaagccccacccacaccccaccacacacaccaactaaaggtaaaaccacc
tcccctcacacgagctcccccacccacgctccaggctcgcctctgagaatgcaaagcagg
ccaagggggcccagcgactgcccccgttcgcacgctcactctcgcgccgtgccgttactc
tgtcttccacctgaaggcggcactgtggatgaggaggaccacactccacccttgcccaga
agggtccctcgcagcgcaacgccggccgtgcctgaagttttggaatgttctaaagaggat
ctacccttgcctgattcttctgtgaagtacgccacgctaggcgtagtcaaccgaaacagt
tcctccaaaagccccagtgacaaccttgatgttggtgtagtgaaccggagccagtcgttt
gcaaccactcgccctcgtaggagaacgcgccctcccactccacccaagcgctcttgctcc
tccatctccactggaaacctggcagatgaggcagccctttccaatgaaagtgggggcggt
caaggcgagcacagcgactccttcctcagtgtgacgtacagggaacggcgccgaagtgac
tgtggaattgcctctgaatccacttcctctggaggcagtgtcagagacattgctgccatg
ctcgaaatgtccaaattaggaggtggaggcaaaggaactggcaacaattacttgcaggca
agtccagatctcctgcggcgtaaccgtgatgccctcagctcagacgatgatatgcagagt
cggcgccgtaccatcagtgggcctgtcactggctacaccgacagtcatcccaacaacact
cgagaaggcactacttcgaatacttacaccacacaggctgctctggaggcgacacgaatt
atggaggaggctgcacctcaacaacaggtgcccttgaggcaggcccccgagccccgtcct
cgttccatgctcagtcacctggaaggaggtgttccctccctcccacaggaagagtggtca
cgaatggatgctaccgcaaccttgagaaggcctcggccaccccacgactcagatagcgag
aggttccaacttacagagaccagcaccatccggcgcagaccgaaggcactagcaactcca
cagaaggacatagagaatggtccagaaagctcccggaggaggcctgtgtcggaagcttgt
gctggggatgttagtggcagcgacagggaactgagaccagatgatttcagaagagtgttg
aggcctccagtttcccccaaaccttcactcgccctcaggaagatggatcctccaacccct
accagaagggtccccctgcctgggcctgaaggtcaacatagcccagtggatggcaaaaaa
gtcccaccaccagtgtctccaaaaccaagcccacctccaacactccccaaacctatgaag
ataaagccagtgcagaccccaggatcttctgcagcacctcatccccaaatagtcaccaca
cccagtggcctaaacacacacatgccctcccctactgctgttcaccctgagcaagtcgag
tatcctactcttagcccagtgataccaaagccgccagaggctcacaccctctcgccgcga
gctgccacttctcctgctcagagcccacagacacctcaaactcctcaaaccccacaaacc
ccttctactccagggtccggttcagcgccagtcaagcccccaaggtcctccatggcaggc
ctttcagtggatatccctggccctctggaagtggaactggctggagtggaggctgtccag
caccgactgcgggatgtggagagacagcgagacgaggacgatcgaaggagagaaaaaata
gaagacagaatggatggtggttgtcaaagccagacaaagagagcttctgtagagggacag
ggcgaacatggtgatgttgacctcattaggagtgccgaagggtcagggcaggttgtgatg
aggaggaggaaagtgggcatggcgaggcagccacaggtcgagggtgaacttgaaggtgta
aggcaagacataaaagcagaggcgcttcagcagatggcattggaagctgaagcaagaggc
atgtttggggaccaggcagcaggggacatgacccatctccggctggaggaaaccagtgcc
tcactagctgctgctctggaagtggtagaggagaagatcaagaaggaagacaattctgtg
gtggagaataaagctacagtcaacattctggatgacatcggaagcatgtttgatgaccta
gctgaccagctggatgccatgttggattaa
DBGET
integrated database retrieval system
