Astyanax mexicanus (Mexican tetra): 103038460
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Entry
103038460 CDS
T05042
Symbol
zc3h13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103038460 (zc3h13)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
103038460 (zc3h13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
DUF3915
zf-CCCH_DUS3L
zf-CCCH_2
zf-CCCH_PAN3
Motif
Other DBs
NCBI-GeneID:
103038460
NCBI-ProteinID:
XP_007246718
UniProt:
A0A8T2L0J8
LinkDB
All DBs
Position
21:30921305..30939122
Genome browser
AA seq
1811 aa
AA seq
DB search
MSKIRRKVTVENSKTISESSSSTTTPSRRPSVFERLGPSTGSNVAEQTHCRNWLKTGNCS
YGNTCRYTHGTPSRGKGFSGTFSRSAERPTGDLRERMKNKRQDVDADTQKREPDEPTSPP
ARQRDSSRGRHREKEDIKITKERTPASEEEPAEWEANREDSDNGDYDYELSLEMKRQKIQ
RELMKLEQENMDKREEIIIKKEESVTKTRTGSTSKERGTPERSSSKGSPSSRKSGGSPKR
KASGKSGSSGKKEKKASSSSSVISSPVAEQSRPEEAESRSSKSGHGKKKGPRTPSPPPPV
PLDLPVGGKKHKGKHKNKEKSEDKQKEGKERGRDTEKHKEKKEKRRDRSDSSHKAKRSVT
SEERSGSVSSPSREISPPPTRRKSTSPKPAAQKQASPQRSRTPPRHHRSPSPVAHPHHSP
SSHSGSSHQRHSPSPHRRRGSASPAYQRDLLPPSSPQGTQASRRSRSRSPATPHRETSPS
GRGRSSPASRHHSQGRERERGRSERERSPTQDRRLERRDESRGKREKDGARSDRSYEADQ
GSVRDERETRENRERRVDRDRRDTRDDRGQHRNQSDVKDTRESRAPEVKDRTGRESLERR
ERDRDRERERERDRNETHRKEEPLAQEDRSYGRGHGREEGRGESRGENRNDSRAERTGRG
RGRAPEPVDKGSARASRASQGEIVGSSSHDSWDSRGSGLRERSSERTSERGAERDRYDND
RQRGEQGRDSSYDRRGSHADRERRDNRDRDQRASSPTRHQSRGDEMEREERRDERRGERG
EPDRRDERGREREREREREREREREKEREAERERERAREREREREERERERERERERERE
REREREREEREREREREREREREREREEREKERERERKEREREREQRERERQREWEEREK
CREERRERREESRDERPGRDGHEERKNSGRKRHRVENSPSPRPSPKKVRETSPVESDGYN
STEEKGEKHRLLSQVVRPQETSRSPPRLSTDDKSATRWREEDRRVDKKDGRGRYEEVEAR
GRGAERRADPPPEAALTTAAPEPRRVKDQRDAGTPPPAPAAPEGRDSATAVHEEAKKKTK
SQKKNLKKNRKEEEGNAAGPGDRFNPEPPLSASSAAPSEAPRPLMSPRKTGKKKAVDRKR
KRSRGAESDVSEDEQAAQHPLSKRRRGPRTPPPINKEDLPSQRALMAGRHAAAPLLKMDT
NFSDWSDEDVPERADTASASLPVSIPTGERPPERLLPAELPPRRGRNIAPLLPDPPMLMQ
ALPLQPLLPQLMLRKPQDSQQQQQQPMQQQQRSGSMGSNQSRASSRRLRSPSSDSAHRVD
EGQPGVRSRRGRMHGGNSRDRDRERERERERERERERERAAAAAAAVNETMGGERKSRID
QLRRGEPSRSTSSDRQDSRSHSSRRSSPESERQGRSRAGSYDSRERERDQFERDRKDHRQ
PPNQPMPGQQREWEPEPREWPVRGREPLLLRGNREPIRERDLREMRERERMLPEGLLPHE
RLDRDRGERERERDRDRERERDRGDRERMLPFDFPPLGEPKSRADMRTERGDYEPLLPRE
ALMDADKPSTTDELHTQIEPCETEKVDSLDEEEDGKGEDVQSAASGGEEYEPISDDELDE
ILADSQKRDEQQDEDKSSGPLDVIDVDWSSLMPKQKQEPRTPGAALLRFTPGAVLLRAGV
SRRLAGPQLLSRVKEVCAKELEDTKDAEKLFEHDLGALNMAALNRKTERASLLRNLGPCC
KALCARRDIAIRRQLLKNEKGTTKQIYTSAPVVDQELLQLSVRLFKKKMAAGQEKAEPAS
MASTSAEVRVP
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatcaggcggaaggtgacagtggagaattcgaagaccatatctgagagcagc
agcagcacaaccacgccatctcgccggcccagcgttttcgaaagactcggacccagcacg
ggcagtaatgttgctgagcagacccactgcagaaattggctaaagactggaaattgcagt
tacggcaacacttgtcgctacacacatggaactccatcaagaggcaaaggtttttctgga
acgttcagcaggtcagccgagaggcccactggggatctccgggagagaatgaagaataag
agacaggatgtagatgcagacactcaaaaaagagagccagacgaacctacttcaccccca
gcaagacagagagattcatcccgtggtagacacagagagaaggaggacatcaagatcact
aaagaacgaactccagccagcgaagaggaaccagcggagtgggaagccaatcgagaagat
tcagataacggagactacgactacgagctttcccttgaaatgaagagacaaaagatccag
cgcgagctgatgaagcttgagcaagagaacatggacaaacgagaagaaatcattatcaaa
aaagaggaatcagtcaccaagaccaggactggcagcacttccaaagagcgaggcactcct
gagcgctccagctccaagggttcaccctcatcccgtaagtctggaggctcccccaaacgc
aaggcgtctgggaaaagtggcagctctggcaagaaggagaagaaagcatcatcctcttcc
tctgttatctcatctcctgtggcagagcagagcaggccagaggaagctgagagcaggtca
tccaagtctgggcatggcaagaagaaaggtccacggactcccagccctcctccgcctgtg
cccttagatctgcctgtgggaggcaagaaacacaaaggcaagcacaagaacaaggagaag
agtgaggataaacagaaagaaggcaaggagagaggaagagacacagagaagcataaggag
aagaaggagaaacgcagggaccgctctgacagttcccacaaggcaaagcggtctgtgacc
tcagaggaacgatctggcagtgtgtcatccccttctagagagatatctcccccaccgacg
aggaggaagtctacatcccccaaacctgctgcccaaaaacaggcttcaccccagaggtcc
cgtactccacctcgtcaccaccgcagcccctcccctgtggcccacccccaccactcccct
tcttcccactcaggctcctcccaccagcgccattctccttcccctcaccgccgccgtggg
tctgcctccccagcctatcagcgggaccttcttcctccctcctcaccccagggtactcag
gcctcgcgccgttcacgctcccgctctccagccacaccccacagggagacttcgccctca
gggcggggtcgctctagccccgcctcccgtcaccactcccagggccgggagagggagagg
gggcgcagtgaaagggagaggagccctacccaggacagacgcctggaacgcagagacgag
agccgtggtaagcgagagaaggacggtgctcgcagtgaccgcagctatgaggccgatcag
ggctcagtacgagatgaacgcgagacccgggagaaccgtgagcgccgtgttgaccgtgac
agaagagacacgcgagacgaccgtggacaacatcgcaatcaaagtgacgtcaaggacacc
agagagtctcgcgcacccgaggtcaaagaccgcactggacgagaatcgctggagcggcga
gagagagacagagacagagagcgggagcgcgagagggatcggaacgagacccacagaaag
gaagagcctttggctcaagaagacaggagttacggaagaggacatggccgagaggagggg
cggggcgagagcagaggggagaacaggaacgattctcgagccgaaaggacggggaggggc
cggggacgagctccagagcccgtcgacaaaggttcagcccgtgcatcccgagcatcgcag
ggtgagatcgtgggcagcagcagtcatgacagctgggactctcgaggcagtgggctgaga
gaacggagctctgagagaacctcagagagaggtgcagagcgggatcgctatgataacgac
aggcagcgtggagagcagggacgagactcgtcgtacgaccggcgtggaagtcacgcggac
agggagcgacgtgacaacagagacagagatcagagagcctcctctcccacccgtcaccag
agccggggcgatgaaatggagcgtgaagagaggagagatgagcgcagaggagaacgaggg
gagccagacagacgagatgagcgtggccgtgagcgagagagagagcgagagagggagagg
gaaagagaacgagagaaggagcgagaggcagagagggagagggagcgggccagggagcga
gaacgggagagggaggaacgagagagggagagagagcgagagcgggaacgggaaagggag
cgcgaacgggaaagagagagggaggagcgagagagggagcgggaacgagagcgtgaaagg
gaacgagagcgggagagggaggagcgtgaaaaagagagggagcgagagagaaaggagagg
gagcgagagcgcgagcagagagagagggagaggcagagggagtgggaggagagagaaaag
tgccgggaggagagacgcgagaggagggaagagtcaagagatgagcgtcctggacgggac
ggtcatgaagagagaaagaacagtggacgcaagaggcaccgtgtggagaacagccccagt
cctcggccctccccgaaaaaagtgcgggaaaccagccctgtagagagtgatggctataac
agcactgaggaaaaaggtgaaaaacatagacttctaagtcaggtggtgcgtcctcaggag
accagccgctccccaccacgcttatccaccgacgataagtctgccacccgctggagggaa
gaagaccgccgtgtcgacaagaaagatggacgtgggcgctacgaggaggtggaggctcgc
ggtagaggggcagaacgacgtgctgatcctcctccagaggctgccctcaccacagctgct
cctgaacctcggagggtgaaggatcagagagatgcaggcaccccgcctccggcccctgct
gcccctgaaggacgagactccgccactgccgtccacgaggaagcaaaaaagaagaccaag
tctcagaaaaagaatctgaagaagaacagaaaagaggaggagggcaatgctgctgggcct
ggagaccgttttaacccagagccacctctttctgcctcttccgctgccccctccgaagct
cctcggccacttatgtctcctcgtaagacaggcaagaagaaagccgtggaccgaaagcgc
aagcgttcacgaggtgccgagtcggacgtttctgaggacgagcaggccgctcagcacccg
ctcagcaagaggcgacgtggcccacgcactcctccaccaatcaataaagaggacctcccc
tctcagagagcccttatggctggacgtcatgcggcagcaccgctactgaaaatggacacg
aacttcagcgattggtcggatgaagatgttccggaacgggctgataccgcttctgcttca
ctaccagtttcaattcctacaggtgagcgacctccagagcggctgctccctgccgagctg
ccccccagacgagggcgaaacatcgcccccttacttccggacccacccatgctgatgcag
gcattacccctgcagcctctcctgccccagctcatgctgcgtaagccacaggactcccag
cagcagcaacaacaaccaatgcagcagcagcagcgcagtggcagcatgggcagcaaccag
agccgggcgtcctcccgcaggctccggtccccctccagtgactccgcccaccgtgtagat
gaggggcagcctggggtgcgctcacgtagaggccgcatgcacggaggcaactctcgcgac
cgggacagagagagggagcgggaaagggagagagagagggagcgcgagagggagagagca
gcagcagcagcagcagcagtgaacgagacgatgggaggagagaggaagtcgaggattgac
cagctgaggaggggagaaccgagtcgcagcacatcttcagaccggcaggactcgcgcagc
cacagctcgagacgcagctctccagagtcagagcgacagggccgctctcgtgcaggctcc
tacgacagccgcgagcgcgagcgggatcagttcgagagggacaggaaggaccacagacag
ccaccgaatcagccaatgcccgggcagcagcgtgaatgggagccggagccgcgcgagtgg
cctgtccgtggacgggagccactcctcctccgtggcaatcgggagccaatcagagagcgg
gacctgagagagatgcgtgagagggagcggatgctgcctgagggactgctgccacacgaa
cgcctggatcgagaccgcggggagagggagcgagaacgggacagagaccgcgagagagag
cgggacagaggggatcgggaacggatgctgccgtttgacttcccaccactgggggaaccc
aagagcagagcggatatgaggacagaacggggagactatgagcctctcctgcccagagaa
gctcttatggatgcagataaacccagcactacagatgaactgcacacacagatcgagccc
tgcgagacagagaaagtggacagccttgatgaagaagaagatgggaagggagaggatgtg
cagtctgcagcttctggtggggaggagtacgagcccatcagtgacgatgaactggatgag
attttggccgacagccagaagagagatgagcagcaggatgaggataagagttcagggcca
ttggatgtgatcgatgtggactggtccagtctgatgccaaaacagaagcaggagccacga
actccaggagctgctcttctgagattcacccccggtgctgttctcctgagggcgggggta
tcccgacgactcgctggaccccagctcctcagccgggttaaggaggtctgtgccaaagag
ctggaggatacaaaagatgcagagaagctgtttgagcatgacttgggagcgctgaacatg
gccgccctcaacagaaagactgagagggcgagtctgctgaggaacctcgggccgtgctgt
aaagctctgtgtgcccgccgagacatcgccatccgcaggcagctgcttaaaaacgagaag
gggacaactaagcagatctacaccagcgccccagtggtggatcaggagctgctgcagctc
agcgtgcggctctttaagaagaaaatggcagctgggcaggagaaggctgagccggcctcc
atggctagcacttcggccgaggtgcgcgtgccctga
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integrated database retrieval system
