Astyanax mexicanus (Mexican tetra): 103038468
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Entry
103038468 CDS
T05042
Symbol
usp9
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amex01002
]
103038468 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103038468 (usp9)
Enzymes [BR:
amex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103038468 (usp9)
Peptidases and inhibitors [BR:
amex01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103038468 (usp9)
Ubiquitin system [BR:
amex04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103038468 (usp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
DUF2014
Motif
Other DBs
NCBI-GeneID:
103038468
NCBI-ProteinID:
XP_049341382
Ensembl:
ENSAMXG00000002577
LinkDB
All DBs
Position
11:complement(5910989..5949545)
Genome browser
AA seq
2607 aa
AA seq
DB search
MTATTRGSPVGGNDSQDQGQAPDGQSQPPLPQNQTSSPTSSNENSPVSPPEEQGQADCPP
QLEEEEPAFPHADLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLCKKGLDVKCEACQR
FFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLMELCVTKLSQDWFPLLELLAMAT
NPHCKFHIYNGTRPSETVPAGVQLAEDELFARPPDPRSPKGWLVDLINKFGTLNGFQILH
DRFMSGQVLNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDEELKKEA
KNEAKNDALSMIIKSLKNLASRVPGQEETVKNMEIFRLKMILRLLQISSFNGKMNALNEV
NKVISSVSYYTHRHGNPEEAEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILR
FVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKESWTN
ASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDY
SCSQDRDTQKIQWIDRFIEELRSNDKWVIPALKQIREICSLFGEAPQNLRKKIPINLKSL
EGQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMENMRQFSKAEHTDFDPQTVRPG
SRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLM
GDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRVYMMDD
LELIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQANQVEIHEDFIQSCFDRLKA
SYDTLCVLDGDKDSINCARQEAIRMVRVLTVLREYITECDSDYHEERTILPMSRAFRGKH
ITLIVRFPNQGRQVDDLDIWSHTNDTIGSVRRCILNRIKANSAHTKIELFIGGDIVDPVD
DRKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESC
LPGVIMSLHLRYISFLWQVADLGCNLNMPLLRDGARILMKLMPPDNTTVENLRAICLDHA
KLGENSLSPTLDSRFFGPSPSQVLYLIEVVYALLMPASGTLGEDASDFQYNFLKSGGLPL
VLSMLTRNNFLPNADMETRRGAYLNALKIAKLLLTAVGFGHVKSVAEACQPVAEGTIPVS
PINQATHDQALVLQSALQNIPNPSAECMLRNVAIRLAQQISDENFFQASKYIPDICVIRA
VQKIVWASGCGTIQLVFSSNEEISKIYEKTNAGNEPDAEDEQVCCEALEVMTLCFALIPT
ALDALSKEKAWQTFIIDLLLHCQSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVL
GSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIKDEVKRTGETG
VEETILEGHIGVTKELLAFQTPEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQYLKSG
EFPTEQAIPVCSSPATITAGFELLVALAVGCVRNLKQIVDTLTDMYYSGCEALTEWEYLP
PVGPRPNKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGSDVDDDMSGDEKQD
NESNVDPRDEVFSYHHQFDDKPSLNKSEDRKEYNIGVLRHLQVIFGHLASSRLQYYVPRG
FWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQG
CPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLI
KKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGSDMHPENQQ
VIQQNEPSEPEPPCSSRYRLVGVLVHSGQASGGHYYSYIIQRNGSGGEGERNRWYKFDDG
DVTECKMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDKDS
ELVKYISELTLSTKPHQVKMPSAIECSVRKQNVQFMHSRMQYSLEYFQFIKKLLTCNSVY
LNPPPGQDHLLPEAEEMAMISIQLAARFLFSTGFHTKKVVRGPASDWYDALCVLLRHSKN
VRCWFAHNAIFAYANRFSEYLLECPSAEVRGAFSKLIVFIAHFSLQDGPYPSPVASPGPS
SQGCDNLSLSDHLFRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLSVPA
TFMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVASRMQSSINGNPPLPNPYGDPS
LTQPIMPLQQLVADILFVRTSYVKKIIEDCSNSEETIKLLRFCCWENPQFSSTVLSELLW
QVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKR
AYQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNAQYTYNNWS
PPVQSNETSNGYFLERSHSARMTLAKACELCPEECHLMKHEVVSEEDAGRKPSSPQQLLP
GEVTGQQQHTEQDDQDAPDDQESSPPEDTSLYPHSPGTQYQQQNNLPHGQPYTGPAAQHM
NNPQRPGVRAQENWEPTEEVPPAQTKE
NT seq
7824 nt
NT seq
+upstream
nt +downstream
nt
atgactgccacgacacgtggctcccccgtagggggcaatgacagccaggaccagggccaa
gctccggatggtcagtcccagccgccactgccccaaaaccagacgtcctctcccacctcg
tccaatgagaactctcctgtgagccctccggaggaacagggccaggcagactgcccgccc
cagctggaggaggaggagcctgctttcccccacgcagacctggccaagctggatgatatg
atcaacagaccccgctgggttgttccagttttgccaaagggtgaattagaagttcttctc
gaagctgctatagatctttgtaaaaaaggacttgatgtcaagtgtgaagcctgccagagg
tttttccgtgatggtttgacaatatccttcacgaaaatattgacggatgaggctgttagc
gggtggaaatttgagattcacaggtgcataatcaacaacacccatcgtctgatggagttg
tgtgtgaccaagctctctcaggactggttcccccttctagagctcttggcaatggccacc
aaccctcattgcaaattccatatatacaatggtacccggccctcagagacagtgcctgct
ggggtgcagttggctgaagacgagctctttgcccgcccacctgaccctcgttctcccaag
ggctggttggtggacttaataaacaagtttggcacattaaacgggtttcaaattctgcac
gatcgcttcatgagtggtcaggttctgaacgttcagatcatcgctgcactcatcaagccg
tttgggcagtgctatgagtttctcactttgcacacggtgaaaaagtacttccttcccatt
attgaaatggttccccagtttctagaaaacctcactgatgaagagttgaagaaggaagcc
aaaaatgaagctaaaaatgatgctttgtctatgataatcaaatcattgaagaatctggct
tcacgagtacctgggcaagaggagactgtgaagaacatggagatttttaggttaaaaatg
attcttaggttattgcaaatttcctcttttaatggcaaaatgaatgcactaaatgaagta
aacaaggtgatctcgagtgtctcgtactacactcatcgccacggcaaccctgaggaggcg
gagtggctcacggcagagcgcatggcagaatggattcagcagaataacattctgtccatt
gtactgcgggacagcctgcatcagccacagtatgtggagaaactagagaagatcctgagg
tttgtcatcaaggagaaagctcttacacttcaggacctggacaacatttgggctgcccag
gctgggaaacatgaggctattgtcaagaatgttcatgatcttcttgcaaagttagcatgg
gacttctcacctgagcagctggaccatctctttgactgttttaaggaaagttggactaat
gccagtaaaaagcaacgggagaagttgctggaactgattcgaaggctggcagaagatgac
aaggatggtgtgatggctcacaaagtgctcaacctgctgtggaatttggcccatagtgat
gatgtacctgtggacatcatggaccaagccctcagtgcccatatcaagatcctggactac
agctgctctcaggatagggatacccagaagatccagtggatagatcgattcattgaagaa
ttgcgatccaatgataaatgggtaattcctgcattgaagcaaattcgggagatctgcagt
ctgtttggagaggctccacaaaatctcagaaagaaaatacctattaacttaaagagctta
gaaggtcaaacacagaggagtccgcatgttttttatcgacatgaccttatcaaccaacta
cagcacaatcacgcactggtcactctggtggctgaaaacctgtcagcgtatatggagaat
atgaggcagttttccaaagcagagcacacagatttcgacccccagacggtcagacctgga
agcagatacagtcacgtgcaggaggtccaggagcgtctgaactttttgaggttcctgctg
aaggatggtcagctgtggctctgtgctcctcaggccaagcagatctggaagtgcttggca
gagaatgccgtgttcctgtgtgatcgtgaagcctgcttcaaatggtactccaagctcatg
ggggacgagccggaccttgaccccgacatcaacaaggacttctttgaaaataatgtgctg
cagctggacccctcgctgctgacggagaatggcatgaagtgctttgagcgcttctttaaa
gcggtgaactgcagggaaggaaagctggtggctaaacgacgggtgtacatgatggatgat
ctggagctgattggacttgattacctttggagggttgtgatccaaggaagtgatgacatc
gctagccgagcaattgatttgctaaaagaaatttatacaaatctcggaccaaaattacaa
gctaatcaggtagagatccatgaggattttattcagtcttgctttgaccggctcaaagcc
tcctatgacacgctgtgtgttctggatggggataaggacagcattaattgtgccaggcaa
gaggccatccgcatggtgagggttttgactgtgctcagggagtacatcaccgagtgcgac
agtgactaccatgaggagaggaccattcttcccatgtccagagcgttcagaggaaagcac
atcaccctgattgtgcgatttcctaaccaaggtcggcaggtggatgacttggatatctgg
tcccacaccaacgacacgatcggttctgtgcggcgctgtattcttaatcgaataaaggca
aacagtgcgcacacgaagattgagctcttcatcggcggggacattgtagatcctgtggat
gataggaagttaattgggcagcttaatctcaaagacaaaacgctcatcacagccaagctc
acccaggtcagcgccaatatgccttcaagcccagacagctcctcagactcttccacaggc
tcccctggaaaccatggcaaccactatagtgatggtccaaaccctgaagttgagagctgt
cttcctggagtgataatgtctctacatctgcgctatatctccttcctgtggcaagtagca
gatctggggtgtaatctcaacatgcctctcctacgtgatggtgctcgaattcttatgaag
ctcatgcctccagacaacactactgtagaaaacctgcgcgccatctgcctggatcatgcc
aaacttggagaaaatagccttagccccactctcgactcacgcttctttggcccatcacct
tctcaagtcctttacttgatagaggttgtctacgccttgctgatgccagctagtgggacg
ttaggagaagatgctagcgacttccagtacaacttcttgaagagtggtggtctgccgctg
gttttgagcatgctcacccgaaataacttccttccaaacgctgacatggagactcgtcgg
ggagcctatctcaacgcactaaaaatagccaagctcctgctcacagcggtgggctttggc
catgtgaagtctgtcgcagaagcgtgccagcctgtggcggagggtaccatccctgtttca
cctataaaccaggctacacatgaccaggctctggtgcttcagagtgccctccagaatatc
cccaatccatcagctgaatgcatgctccgcaacgtcgccatccgcttggcccagcagatc
tctgatgagaactttttccaggcctcgaagtatatcccagacatctgtgtcatcagagct
gtccagaagattgtttgggcctctggttgtggcactattcagcttgtcttcagttccaat
gaagagattagcaagatctatgagaagactaatgcagggaatgagcccgacgcagaagac
gagcaggtatgctgcgaggcgttggaggtcatgaccctgtgcttcgcccttatccccact
gcattagatgcgcttagcaaagagaaggcctggcagaccttcatcattgacctgctgctg
cactgccagagcaagtctgttcgacaaatggcacaagaacagttctttctcatggccaca
aggtgttgtatggggcacaggccactcctgttcttcatcacccttctcttcacagtttta
ggtagcactgcaaaagaacgggccaagcacgctggtgattacttcaccctcttgaggcac
ttgctcaactacgcatataatagcaacattaacctccctaatgcagaagttcttctcaac
aatgagattgattggttgaaaagaatcaaggatgaggtcaagagaactggggagactggg
gtggaagagaccattttagagggccatattggtgtaactaaggagctgctggcttttcag
accccggaaaagaagtactatataggctgtgaaaaaggaggagcaaacctcatcaaggaa
ctaatagatgacttcatcttcccagcctctaatgtgtacctgcagtacctgaagagtggg
gagttccccactgagcaggccatacctgtgtgtagcagtcctgccaccatcactgctggt
tttgagctcctggttgcacttgctgtcggatgtgtgcgcaatcttaaacagattgttgac
acgctaactgacatgtactactcaggttgtgaggcacttacagaatgggagtacttgccc
cctgttggcccaagacccaataagggctttgtggggctgaagaatgcaggtgccacttgc
tacatgaattcagtaatccagcagctctacatgatcccgcctatcagaaacggcatcctg
gctattgagggcacaggcagcgacgtggatgatgacatgtctggagacgagaagcaagat
aatgagagtaatgttgatccacgggatgaggtcttcagctatcaccaccagtttgatgat
aaaccatcactgaataaatcagaagacagaaaagagtacaacatcggtgtactgcgccac
ctgcaggtgatctttggacaccttgcgtcctccaggctgcagtactatgttcccaggggc
ttctggaaacagtttaggttatggggtgaaccagtgaacctgagagagcagcacgacgct
ctggagttctttaactcgcttgtagatagtttagatgaggctttgaaagcacttggccat
cctgccatgctaagcaaagtgcttggtggttcctttgctgatcagaagatctgtcagggc
tgtcctcacaggtatgaatgtgaggaatccttcacaacactgaatgttgatattagaaac
catcagaatctccttgattccatggagcagtatgtgaagggggacttgcttgagggtgct
aatgcctaccactgtgaaaaatgcaacaagaaggtggatacagtaaagcgcttgctgatt
aagaaactgccaccagtactggccatccagctgaagcgctttgattatgactgggaacgg
gagtgcgctattaagttcaatgactactttgagtttcccagggagctggacatggagcct
tacactgtagcaggagtagccaagctggagggctctgatatgcaccctgaaaatcagcag
gtgatccagcagaatgaaccatcagagccagaaccaccgtgcagctcacgctacagactt
gtgggagttctggtgcactcaggccaggccagcggaggccactattactcttacatcatc
cagaggaatggcagtggcggagagggcgagaggaaccgctggtacaagtttgacgacggg
gatgtcacagagtgcaagatggacgatgacgaggagatgaagaaccagtgctttggggga
gagtacatgggcgaagtgtttgatcacatgatgaagcgcatgtcctaccgccggcagaag
cgctggtggaacgcctacatcctgttctatgagcgtatggactctttggacaaagacagc
gagctggtgaagtacatctctgaactgaccctgagcaccaagccgcaccaggtgaagatg
ccctcggccatcgagtgcagcgtgcgcaagcagaacgtgcagttcatgcacagccgcatg
cagtacagcctggagtacttccagttcatcaagaaactgctgacctgtaatagtgtctat
ctgaacccaccgccaggccaagaccatctattacctgaagcagaggaaatggctatgatt
agcattcagctcgctgctagatttctcttcagcacgggattccacaccaagaaggttgtc
cgcggtcctgccagtgactggtatgatgccctgtgcgttttgcttcgacacagcaagaat
gtacgctgctggtttgcacacaatgccatctttgcctacgcaaaccgcttctcagaatat
ctgctcgagtgccccagcgccgaggtccggggagccttctccaagctcatagtatttatt
gcacatttctctctgcaagatggaccctacccatcaccggttgcctcaccagggccatcc
agtcagggctgtgataatctgagcctgagtgaccacttgtttcgggcggtgctcaacctc
ttacggagagaagtatcagaacacgggcgtcacctgcagcaatactttaatctctttgtc
atgtacgccaacctaggcttggctgagaagacccagctactgaaacttagcgtgccagcc
acattcatgctggtggctctggatgagggtccaggccctcccattaagtaccagtatgct
gagcttggaaagctgtacacagtggtgtctcagctggtgcgctgctgcgatgtagcatcc
cgaatgcagtcctcaattaacggtaaccctcctcttccgaatccctacggtgatcccagc
ctgacgcagcccataatgccactgcagcagctggtggcggatatcctgtttgtacgcacc
agctatgtgaagaagatcattgaggactgtagcaactcagaggagaccatcaaactgctg
cgcttctgctgctgggagaaccctcagttctcctccactgtactcagtgagcttctgtgg
caggttgcatattcctacacatatgagctaaggccttacctggacttgctgctacagatt
ttgctcattgaggactcctggcaaacccataggatacacaatgtgttgaagggtatccca
gatgaccgtgatggactgttcgacaccatccagcgctctaaaaaccactaccagaaaaga
gcttaccagtgcatcaagtgcatggtagctttgttcagcaactgctcagtagcttatcag
atccttcagagtaatggggacttgaaaaggaagtggacctgggcagtagaatggcttggt
gatgaactagagcgcaggccatacactggtaatgctcagtacacatataacaactggtcc
cctcctgtccagagcaacgagacttccaacggatacttcctcgagcgctcccatagtgcc
cgcatgaccttagccaaggcctgcgagctgtgcccagaggagtgtcacttaatgaagcac
gaggtggtgtctgaagaggacgcaggccggaagccgtcctcgccacagcagcttttgcca
ggggaagtgacaggccagcagcagcacactgagcaggatgatcaagatgcccctgatgat
caggaatcttctccaccagaggatacctccctctatcctcactctccagggacccagtat
cagcagcagaacaaccttccacacggccagccgtacacaggcccagcagcacagcatatg
aacaatcctcagcgccccggcgtacgagcacaagagaactgggagcccacggaggaggtt
ccacccgcccagacaaaagaatag
DBGET
integrated database retrieval system
