Astyanax mexicanus (Mexican tetra): 103038515
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Entry
103038515 CDS
T05042
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103038515 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amex03400
]
103038515 (mlh3)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
103038515 (mlh3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
DNA_mis_repair
MutL_C
HATPase_c
WW
Motif
Other DBs
NCBI-GeneID:
103038515
NCBI-ProteinID:
XP_007235804
Ensembl:
ENSAMXG00000002830
LinkDB
All DBs
Position
13:1469344..1478845
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AA seq
1202 aa
AA seq
DB search
MIRTLSKEVQAKLRSGVAVFSLQQCVEELVLNSIDAGATCIAVKIDIEACKVQVIDNGSG
MSREDMEKVGTRYCTSKCSSLEDLDDLRFYGFRGEAIASIASLSTLVEISSQTKASVKTF
VKTFNEGRGSGVCEVQDTRPSPGTTVLICNFFHNMPVRRKRMDSVLEVERLRQRVEAISL
MHPSVSFTVKKDCSGTMLVQLPKARNTYYRFVQIHGLGRAQKLREVNFTHGQFEMTGSIG
REGHYKNSLQFLFVNSRLVLKTRLHKLLNCLLRKLSSSSNQNNSPNASAVTSSPKQRGGA
DSHGVYVINLKCPYSEYDVCLEPAKSLIEFRDWDAVLFCVEEGVKSFLTKENLVSEFSVS
DAQTFASVFSDPTGSSSPCSKATAQSRDKESTVCESDLNGNMTQVNSGDQTESVQNLSFD
QIFDRGSSNAESAAGSEAEAESKEVQSVEKPSLQRDLEDYGNSQDFETSVHDLQLIDTLS
NNSTMTHQEFTQSKVAVIGPNEAQDSLRRFAEPNICCAPKRKLSLLQTQSLCLESGVGPK
MAKVAPRRKLTLAFETGSLDKFKRMYGKSSERQSVETQIANALQPSDCVLSSEGPALPAL
QGTGVSSLIFEPEQVEKTEKTHSENFLIKKDSMLTLSAYSQTKCSTSASSRTKISLAAKL
SHLKCDKIVQKEKTPYEEGTFDDTRNEETTSVTQHAQRAADSEETFEDSLSQFKTSEDTD
GSSKQMTETNDPNEPTHKFTVPNLPNPSAGDALKRVSELMTSSEPAIPSGHVINPASQHE
PLPTQTGNEVQAPDESPGDESDVPAPVSSDWRTHYDDSLGKLVYINQVTGLSTYEAPSLE
ENPVPCSKDVTNMAVSVVSKTGFEYRCYPFQTDIVLPFLPKPSAIRALASSVGCRDELQG
PGSLSALFSEWNNPVFVRPPQVAVDVTSVQGEGLAVKIHNILFPYRFTKNMIHSMKVIHQ
VDKKFLACLINTTDQESTETSQGNLLVLLDQHAAHERVRLEGLLTESYEDDPETPGKNRL
CSSGVIPPLEISVSEEEIRLLRLYQSSLRDLALEMSFPPADPSHVLLERLPTCFIEKENT
EQRRGRRTVIKSLSEEYLREHIEFLQSAGRVRSSVPLTVHNVLASQACHGAIKFNDVLSK
EECCSLVGSLSSCQLPFQCAHGRPSIVPLVDLLHLEDEQDLPKPNLKKLRRMYKAWQLYG
QN
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggactctttccaaagaagttcaagcgaagctgcgttctggcgtcgctgttttc
tccctgcagcagtgtgtggaggagcttgttctgaacagcattgatgctggagcgacatgc
atcgctgtgaagatcgacatcgaagcctgcaaagttcaggtgatagacaacggctccggg
atgagccgagaggacatggagaaggtggggacgaggtactgcaccagcaagtgcagctcg
ctggaggacctggatgacctgagattctatgggttcagaggggaggccattgccagcatc
gcctctctttctaccttggtggaaatatcctcacagaccaaggcgtcggtgaaaacgttc
gttaaaacctttaatgaaggcagggggtcaggcgtttgcgaggtgcaggatacccgtccg
tcacccgggactacggtgctgatctgcaacttctttcataacatgccggtcaggaggaag
aggatggactctgtgctggaggttgagcgtcttcggcagagagtggaggccatatccctg
atgcatccgtccgtatcgttcactgtgaagaaggactgctcggggaccatgctggtgcag
cttcccaaagccaggaatacctactacaggtttgttcagatccatggattgggaagagct
cagaagctcagagaggtgaacttcactcacggacagtttgagatgactggatcgattggg
cgcgagggtcattacaaaaacagcctgcagtttttgttcgtaaacagcagactcgtgctg
aaaacacgccttcacaaactactcaactgcctgctcaggaaactgagcagctctagcaac
caaaacaacagtcccaatgcctctgctgtcacctccagccccaagcaaagaggaggcgcc
gattcacacggcgtttatgtcatcaaccttaagtgcccctactctgagtatgatgtttgc
ctggagccggcaaagagtcttatcgagttcagagattgggacgctgtcctcttctgcgtc
gaggaaggcgtgaaatcgtttctcacaaaggaaaacttggtctcagaattttctgtgagt
gacgcccaaacctttgcgagtgtttttagcgacccaacaggcagtagtagcccatgcagt
aaagcgacggcacagtcgcgggacaaagagtcgacagtgtgcgaaagtgacttaaacgga
aatatgactcaggttaactcaggtgatcaaacggaaagtgtccaaaatctaagtttcgac
caaatttttgacagagggtcctcaaatgcagagtctgcggcaggttcagaagcagaggca
gaaagtaaagaagttcagagtgttgaaaaaccttcgctgcagagagatctcgaagattac
gggaattcgcaagactttgaaacgagtgtccatgacctgcaacttattgataccctcagc
aacaacagtacaatgacacatcaggaatttacgcaaagcaaggttgccgtaattggtcct
aacgaagctcaggacagtttgagaagatttgcagagcctaacatctgctgtgcaccaaag
agaaaactgtccttgctccaaactcagagtttgtgcttagaaagtggcgttgggcccaaa
atggcaaaggtcgcgccacgtcgcaaattaacactggcttttgaaacgggatctcttgac
aagttcaagaggatgtacggaaaatcttccgaacgtcagtctgtggaaacacaaatcgct
aatgctttacaaccttcagactgtgtattatcttctgaaggtcctgcattgcctgcttta
caaggtaccggcgtcagttcactcatctttgagcctgaacaagtcgaaaagactgaaaag
actcattctgagaacttcttaatcaaaaaagacagtatgcttacactttctgcttacagc
caaacgaaatgttcaacatcagccagctcaaggactaaaatatcattagctgcaaagctc
tcgcacttaaaatgcgacaagatagttcagaaggagaaaacaccttatgaagaaggaacc
tttgatgataccagaaatgaagaaactacctctgtaacccaacatgctcaacgtgcagca
gactctgaggagacgtttgaagactctctgtctcagtttaaaacttcagaggacactgac
ggttcttcaaaacaaatgactgagacaaatgatccaaatgaacccacccacaaattcact
gttcccaatttacctaacccatcagctggagacgctctaaaaagagtttctgaacttatg
acttcctcagagccagctattccctcaggacacgtaattaaccctgcatcacaacatgag
cctctgcccacccaaacaggaaatgaggtccaggctccagacgaaagtccgggcgatgaa
agtgatgtgccggccccggtgtcgagtgactggaggacacattacgacgactctctggga
aagttggtctacatcaatcaggtgaccggactcagtacatacgaagctccatcactggag
gagaatcccgtaccctgctccaaagatgtcaccaatatggcggtcagcgttgtttctaaa
acagggtttgagtacaggtgctacccgtttcagacagatattgtactgccctttctcccc
aaacccagcgcaataagagccttagcttccagcgtaggctgcagagatgagctccagggt
cctggttcactttctgctctcttctcggagtggaataacccagtgttcgtacgaccccct
caagtggctgttgacgtgaccagtgtacagggagaaggcctggctgtgaaaatccataac
atcctttttccctatcgcttcactaagaatatgatccactctatgaaggttattcatcaa
gtagacaagaaattcctcgcctgtcttataaacacaacagaccaggagagcacagagacg
agtcaaggaaacctgctggtgctgctggatcaacacgctgcacatgaaagggttcgcctg
gaggggcttctaacagagtcgtatgaagatgatccagagactccaggtaaaaacaggctg
tgctcctcaggtgtgattcctcctctggagatcagtgtgagcgaggaggagatcagactg
ttaaggttgtatcagtcttctctaagagatctggctctagagatgagctttcccccagca
gatccctcacacgtgcttctggagcgactccccacctgttttattgagaaggagaacaca
gagcagcggcgcggccgacgcaccgtcatcaagtctctctcagaggaatacttgcgggag
cacattgagtttctgcagtcggcaggaagagtgaggagctctgtgcctctcaccgtccac
aacgtcctcgcttcacaagcctgtcatggagcaattaaattcaatgatgttttgagtaaa
gaggagtgctgcagtctggtgggatccctctcatcctgccagctgccctttcagtgtgcc
cacggcagaccctccatcgtccctctggttgatcttcttcacttagaggacgagcaggac
cttccaaaaccgaacctcaagaaactgagaagaatgtacaaggcatggcagctttatgga
cagaattaa
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integrated database retrieval system
