Astyanax mexicanus (Mexican tetra): 103038564
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Entry
103038564 CDS
T05042
Symbol
fxr2
Name
(RefSeq) fragile X mental retardation syndrome-related protein 2 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103038564 (fxr2)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103038564 (fxr2)
Factors involved in mRNA localization
Other mRNA localization factors
103038564 (fxr2)
mRNA cycle factors
Stress granule specific factors
103038564 (fxr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXR_C1
KH_1
Agenet
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
103038564
NCBI-ProteinID:
XP_007250236
Ensembl:
ENSAMXG00000003585
UniProt:
A0A8B9L2K4
LinkDB
All DBs
Position
8:16173168..16192711
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AA seq
676 aa
AA seq
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MDGLAVEVRGSNGAFYKGFVKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPSDYNKDIG
EGEEVEVYSRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTAERIRPVNPNSP
ASRNTFYKVNVAVPEDLREICLTENIHKDFRKAIGASCIFYNASIQELVVLSTTESTVKR
AGLLSDMHFRSIRTKLMLMSRNEEATKHLETSKQLASAYQEEVRVREDLMGLAIGSHGAN
IQQARKVPGVTAIELEEESCTFRIYGETPEAVKQARVYLEFKEDSFPVPRNLVGKVIGKS
GKIIQEIVDKSGVVRVRIEGDNDKKLPREDVGWQASDSADTVDGQEGMVPFIFVGTKENI
SNAQALLEYHVAYLQEVEQLRLERLQIDEQLRQIGVGYRAPPSRTGGPSTGDRERGYLTD
ESSNSLQTSRTYGGRGRGRKGNAYSGYGTNSEMSNASETEDLGEREPRPRGVGVDERGSR
RGGRGRGSSTGRGRGGPGPRNSNTISSVLRDPDSNPYSLLEGEGDLGGDTDASESMGGSD
RRRRSRRRRNDQEPSVIDADANESDGQAAASENGLDEDSKPQRRNRSRRRRNRGNRPEGG
SASRDRQPVTVADLISRPESQSRQNLPVKKEDIQHASHPKENGTSVKKEERVPSKRSPSN
GVATSGEALTLVNGVS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggacggactggcggtggaggttcgcggctctaacggggccttctataagggattcgtc
aaagatgttcacgaagactccctcacaatagtctttgaaaacaattggcagccagagaga
cagctgccatttagcgacgtgcgattgccgcccccgtccgactataacaaggacattggc
gagggagaggaagtagaggtctactccagagcaaatgagcaggaaccctgtggctggtgg
ttggcgagggtgaggatgatgaagggagagttctatgtcatcgagtatgccgcatgcgac
gccacatataacgaaatagttactgcagaacgaatccggccagtcaaccccaacagccca
gcctctcgcaacaccttctacaaagtcaatgtcgccgtacctgaggacctcagagaaatc
tgtttaactgaaaacatccacaaagacttcaggaaagcaatcggagcaagctgcatcttc
tacaacgcttccatacaagaacttgtcgtcttgtccacaactgagtccacagtaaagcgt
gcaggtcttctgagtgacatgcactttcgcagtattcgcaccaagcttatgctcatgtcc
cgtaacgaggaggccaccaaacacttggagacaagtaagcagttggcatcagcctatcag
gaggaggtgcgagtgcgggaggatttaatgggtttggccatcggctcccacggtgccaat
atccagcaggcccgcaaggttccaggtgtgaccgccatcgaacttgaagaggaaagctgc
actttcaggatttatggagagaccccagaagctgtgaagcaggcgagagtgtatctggag
tttaaggaagactccttcccggtgccccggaatcttgtaggcaaagtcatcggcaaaagt
ggcaaaatcatccaagagattgtggacaaatcgggcgtggtgcgagtccggatcgaaggg
gacaatgataaaaagctgcccagggaggacgtaggctggcaggcgtctgacagtgcagac
actgtcgacggccaagagggtatggttccattcatctttgttggaaccaaggaaaatatc
agtaatgcccaggcactgctggagtaccatgtggcctaccttcaggaggtggaacagtta
cggctggaacggctacagatcgatgagcagcttcgtcagattggtgtgggttaccgtgcg
cccccgagtcgtaccggagggcccagcactggagaccgggagagaggctacctgactgat
gagagcagcaattcactccagacatcgcgcacatatggaggaagggggcgtggacgcaag
ggcaatgcatactctggttatggaacaaactcggagatgtccaatgcatcagagaccgag
gacctgggagagcgagagcccagaccccggggtgtgggggtggatgaaaggggctccagg
agaggaggccgtggccgtggatccagcactggaagaggccgcggtggcccaggacccaga
aactcaaacaccatcagctcagtgctgagggacccagacagtaacccctactcactgctg
gagggagaaggtgatctgggtggagatacagatgcgagcgagagcatgggcggcagtgac
cgcaggagacgttcccgtcgccgccgtaacgatcaagaacccagcgtgatcgatgcagac
gccaacgaatcagacggccaggcagctgctagcgagaacggattggatgaagacagtaag
cctcagcggcgcaacaggagccgccgccgccgtaatcgtggcaaccgccctgagggaggt
tctgccagccgtgacaggcagccagttactgtggccgacttaatctctcgcccggaatct
caaagcagacagaaccttccagtgaagaaagaagatatacagcatgcctctcaccctaag
gagaatgggactagtgtgaagaaagaagagcgtgtcccttccaagcgttcccccagcaat
ggcgtggcaacatctggggaggcactgaccctggtgaacggcgtttcataa
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