Astyanax mexicanus (Mexican tetra): 103038572
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Entry
103038572 CDS
T05042
Name
(RefSeq) spermatid perinuclear RNA-binding protein isoform X3
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103038572
Spliceosome [BR:
amex03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
103038572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
dsrm
Dicer_dsRBD
Rmp24-like
Motif
Other DBs
NCBI-GeneID:
103038572
NCBI-ProteinID:
XP_007230071
Ensembl:
ENSAMXG00000015649
LinkDB
All DBs
Position
22:complement(23675233..23698480)
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AA seq
579 aa
AA seq
DB search
MMEENADNSPGSLASDDSYVMAKHSAIYPSAEELDAVQSLVSLVEGALKQVSDWLTNLTN
ANVALSMAPADPNSKCNGPLVGVVRVGSLAKGLLIKGVMDLEVILLCRDKPTKKLLLTIC
TNLPLQLKKLTEDSYTVQPCIPEAAILVFKSSKPDLPLRVTLTSMEMKSREPEKGQVENT
KAKDPSDLLDQQRCLLALASLRHAKWFQVRVSDKRSCLVVLRILRDICNKRPAWEPLKGW
PLELICEKAVATSYRPLGPGEALRRVLGCIATGILLPTDGPGLRDPCEKEQVDTLSAMTV
DQAELLTHTAQHALRLLAFGLIHKFLQMDPLPLANAAVEPKLAEGVAQKRLHEVEMKEDP
RSKKMNSTNVGWLTAKDKPAAEKKAKTLSTSSSTKSTKSSSSAKGKSQGPVLTTRGKNPV
MELNEKRRGLSYDLITENGESQQQRFIIEVQVDGQRFRGCGPNKKMAKANAALAAIERLF
SAHSTNSNKRKRSYTKANPASVNGFHREKRGVSMRRPVLPVFPPAPAYFSPGYTPYSYGP
VVPPPYGGLYFDSAVCPPQTIAPVFIHLGPQDFYPDFYV
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggagaacgctgataattctccaggatcattggccagtgatgactcttatgtc
atggccaaacactctgctatttacccatcagctgaagagctggatgctgtccagtctctg
gtgtcattagtggaaggagctctaaagcaggtctcagactggttaactaatttgacaaat
gctaatgttgcgttgtctatggcccctgcagatcccaactcaaagtgtaatgggccatta
gttggcgtggtacgtgttggatcgttggccaagggtctcctgatcaagggggttatggac
ttagaagtgattctgctctgccgcgacaagcctaccaaaaagctcctgctcacaatctgc
accaacctgccactgcagctcaagaaactgacagaggacagctacacagtgcaaccatgc
attccggaggcagctattctggtattcaaaagcagcaaacctgatctgcctctcagggtc
accctcacctcaatggagatgaaaagcagggagccagagaaaggccaagtggaaaacaca
aaagctaaagatccgtccgatctgctggaccagcagagatgcctccttgctctggcctct
ctgcgacatgccaaatggttccaggtcagagtaagcgataagaggtcctgtctcgtagtt
ctgcgaatcctcagggacatatgcaacaaaaggccagcctgggaacctctaaaaggatgg
ccattagagcttatctgtgagaaggccgttgctacaagttacagaccactaggacctggt
gaggctctccggagggtcttgggttgcattgccacaggtattctgctgccaacagatggg
cccggtctgcgtgacccatgtgaaaaagagcaggtagacactctatcagccatgaccgtt
gatcaggctgagcttcttacccacactgcacagcatgcgctgcggctgctagctttcgga
ctgatccacaagttcctccagatggatcctctccctttagctaacgctgcagtggaacca
aaattagcagaaggagtggcacagaaaagactccatgaggttgaaatgaaagaggatcca
agaagcaagaagatgaacagtactaatgtaggctggctgactgccaaagacaaaccagct
gctgaaaagaaagcgaagactctgtccacaagttccagcactaaaagcacaaagagctct
tcctcagccaagggtaaaagtcagggtcctgtcctcacaaccaggggcaaaaacccagtc
atggagttgaatgagaagaggagagggctttcctatgatctgatcacagagaatggagaa
agccaacagcagcgcttcatcattgaggtgcaagtggatggacagaggttcagaggatgt
gggccaaataaaaagatggcaaaggcgaacgcagccctggcagctatagagagactcttc
tcagcacacagtacgaacagcaacaagaggaagaggtcctacacaaaggcaaatccagcc
agtgtaaatggttttcatcgagagaaaaggggtgtctcaatgcgcagaccagtgcttcct
gtttttccccctgcccctgcatatttctccccaggttacactccttacagttatggccca
gttgtgcccccaccatacggtggtctgtacttcgacagtgctgtctgccctccgcagacc
atcgctcctgtttttattcacttgggtccgcaagatttctaccctgatttttatgtttaa
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