Astyanax mexicanus (Mexican tetra): 103038591
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Entry
103038591 CDS
T05042
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X2
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103038591 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103038591 (dhx15)
03009 Ribosome biogenesis [BR:
amex03009
]
103038591 (dhx15)
Enzymes [BR:
amex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103038591 (dhx15)
Spliceosome [BR:
amex03041
]
Complex A
U2 snRNP components
U2 related factors
103038591 (dhx15)
Complex B
103038591 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
103038591 (dhx15)
Ribosome biogenesis [BR:
amex03009
]
Eukaryotic type
90S particles
Helicases
103038591 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Atrophin-1
Flavi_DEAD
AAA_25
DUF3915
AAA_29
Motif
Other DBs
NCBI-GeneID:
103038591
NCBI-ProteinID:
XP_007255240
Ensembl:
ENSAMXG00000002474
UniProt:
A0A8B9KMV4
LinkDB
All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRSSDGKDRDRDRDDRSKDRERDRDRDRDRERDRDRESKPPSM
TLNSSMVAGGMMPLKQAAVHQQVNPFTNLPHTPRYYEILKKRLQLPVWEYKERFNDILTR
HQSFVLVGETGSGKTTQIPQWCVDMVRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVM
LGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDIL
MGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPERDYL
EAAIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACKRIKREIDDLGPDVGDIKIIPLYSTL
PPQQQQRIFEPPPPRKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIR
VESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVL
QLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLA
KMVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYH
AFKQNHESVQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYINIRRA
LVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTD
IKPEWLVKIAPQYYEMSNFPQCEAKRQLERIIAKLQTKEYSQY
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacggcatcgcttggacctgggcgatgattactcgtccagtaagaagaggtct
tcagacggaaaggaccgtgatcgagatagagatgaccggtcgaaggaccgggaacgtgac
agagatcgtgaccgggatcgagagagggacagagatagagagagcaagccccccagcatg
accctgaactcgagtatggtggctggaggcatgatgcctcttaaacaggcggctgtgcat
cagcaggtcaaccccttcaccaacttgccacacacgccgcgatactacgagatcctaaag
aagcgccttcagctgcctgtctgggagtacaaggagcgtttcaatgatatcctcacccgg
caccagagttttgtgctggttggagagaccgggtccggaaaaaccacacagatcccacag
tggtgtgtggacatggtccggtctttgccagggcccaaacgaggtgtagcctgtactcag
cccagaagagtcgcagccatgagtgtggctcagagagtggcggatgagatggatgtcatg
ctgggacaagaagtcggctactccatcagatttgaagactgtagctcagctaaaactatt
cttaagtacatgactgacggtatgttgctccgtgaggccatgaacgaccccctccttgag
cgatatggagttatcattctggacgaggctcatgagcgcacactggccacagatattctg
atgggtgtcctcaaggaagtcgttcgccagaggtcagacctgaaggttattgtcatgagt
gccactcttgacgccggaaagttccaggtgtacttcgacagctgccccctgctcacgatt
cctggcagaacgcatcctgtggaaatcttctacacgccagagccggaaagagattaccta
gaggcggccataaggacggttattcagattcacatgtgtgaggaagatgagggtgacgtt
ctgctcttcctcacgggacaggaggaaatcgacgaagcctgcaagcggatcaaacgggaa
attgatgacctgggcccggatgtgggagacatcaaaatcatccctctctattccacactc
cctcctcagcagcaacagaggatcttcgagcctcccccacctcgcaagcccagcggagcc
atcggcaggaaggtcgtggtgtccacaaacatcgctgagacgtccctgaccattgacggt
gtggtgtttgtaattgatccaggctttgccaagcaaaaggtgtataacccacgcatcagg
gtggagtcactgctagtgactgctatcagcaaagcgtcggcccagcagagggcggggcgt
gctggacgtacgcgtccagggaaatgcttccgcctctacacggagaaagcgtacaaaact
gagatgcaggataacacataccctgagattctcaggtcgaacttgggctctgtggtgtta
cagctgaagaagcttggtattgatgatttggtgcatttcgacttcatggacccaccagct
ccggagactctgatgcgtgctcttgagttgctcaattatctggctgcactgaatgatgat
ggagacttgacagaactgggctccatgatggccgagttccctctggaccctcagctggct
aaaatggttatcgctagctgtgaattcaactgctccaatgagatcctctccatcacagct
atgctatcagtcccacagtgcttcgtgcgcccaactgaggccaagaaggcggccgatgag
tccaagatgaggttcgcccacatcgacggggaccacctgaccctactgaatgtctaccac
gccttcaaacagaaccatgagtcggtgcagtggtgctatgacaacttcgtgaactaccgc
tcgctgatgtccgccgataacgtacggcagcagctgtcgcgcatcatggaccgcttcaac
ctgccgcggcgcagcacagagttcaccagccgagattactacatcaacatccgccgcgcg
cttgtcaccggcttcttcatgcaggtggcccacctggagcgtacggggcactatttgacg
gtgaaggacaaccaggtggtccagctgcacccttccactgtgctggaccacaagcctgag
tgggtgctctacaatgaatttgtgctgaccaccaagaactacatccgcacctgcacggac
atcaaacctgagtggctggtgaaaattgctccacagtactacgagatgagcaacttccct
cagtgtgaagcaaagaggcaactggagcgcatcatcgctaaacttcaaaccaaggaatac
tctcaatactaa
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