Astyanax mexicanus (Mexican tetra): 103038616
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Entry
103038616 CDS
T05042
Symbol
nfatc2a
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2 isoform X1
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04020
Calcium signaling pathway
amex04148
Efferocytosis
amex04218
Cellular senescence
amex04310
Wnt signaling pathway
amex04370
VEGF signaling pathway
amex04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
103038616 (nfatc2a)
04370 VEGF signaling pathway
103038616 (nfatc2a)
04020 Calcium signaling pathway
103038616 (nfatc2a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103038616 (nfatc2a)
09143 Cell growth and death
04218 Cellular senescence
103038616 (nfatc2a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
103038616 (nfatc2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103038616 (nfatc2a)
Transcription factors [BR:
amex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
103038616 (nfatc2a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
103038616
NCBI-ProteinID:
XP_022532936
Ensembl:
ENSAMXG00000029811
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Position
13:4355335..4411346
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AA seq
902 aa
AA seq
DB search
MSSFYEEKDCSGLGGLAGELGQVNCPDELEFEYLFDYEAPCSEFPAGDPKDEIDLPPHKV
ISPPNSLPYPLEEPSPYTESSSEAFSGYEQLEVKNYSEHTRPGGQALSPRIEITPSREHY
NHGHDSLQNHLVNTSPRPTLTVPGQDTTIYREPLCLSPASSNSSTSWHSETYSPFASPCV
SPSSGQTVTGELCPRFQNIHTGSPRTSPGTSPRTSLAEDSYLGRSPSPRPGSRSTSPQGK
RTYDMYRNPNLIARSRSPSPHGGHDDHHPTNHYSPNTLPEVINGFGQPGTMPPKIVKTNQ
QPYALYPDAHTEGYLMSCDQDIKTKTEPFFVIPSLPWPKQLMPGICSIPVTSLPSLEWPL
PSRTDQYELRIEVQPKPHHRAHYETEGSRGAVKAQTGGHPVVQLHGYRGKEPLGLQIFIG
TADERILKPHAFYQVHRITGKTVTTTSYEKIIHSTKVLEIPLEPKNNMKAIIDCAGILKL
RNADIELRKGETDIGRKNTRVRLVFRVHIPQPGGQHMSLQVASHPIECSQRSAHELPMVE
KQDMDSCSVLGGQQMILTGQNFSADSKVIFTEKTHDGQQIWELEATVDKDKSQPNMLFIE
VPPYRDPSICHPAKVNFYVINGKRKRSQPQHFTYTPLPAPSIKTEPVDEYETGQMGYISQ
ILGASAQTYYHHNPRAVLNPDSGLVPSLASCQQTRPGISPPDPRFQQHSPAIVYSRTEKS
LGGSLYSQTGSSMVPDPHRSVLVHTGSPAQSSPLSAQHSSTQHPTIIQFSPTNHHNQHLL
RGGDPPAPPPPEHQHIIYCEGYNSQHGAQAATTRSPAPAQAPHPQHYPTVIQQQQPYAQR
SAKDRSPPGQADPQRCSPAEEQRASVPGRVTVKQENLDQAYLDDVNEIIRKDLTGVHSRG
QT
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgagctctttttacgaggagaaagactgcagcgggttaggaggcttggcgggagagctc
ggtcaggtgaactgtccagatgagctggagtttgagtacctgtttgactatgaagctcct
tgcagcgagtttcccgctggagaccctaaagatgagattgatctccccccacacaaagtc
atcagcccccccaacagcctcccataccccctggaggagccatctccctacactgagtcc
agctcagaggctttctcgggctatgagcaactggaggttaaaaactactcggagcacacc
aggcccggtgggcaagcgctgagtccgaggattgagatcacgccgtcacgtgagcactac
aaccacggccatgattcactccagaaccacctagtgaacaccagccccagacccacgctc
accgtgcccggccaagacaccaccatctaccgcgagcccctctgtctcagcccagccagc
agtaactcctctacttcctggcactcggagacctactcccccttcgcctcgccctgcgtg
tcccccagcagtggacagacggtgaccggggagctgtgccctcgcttccaaaacatccac
acgggctcgccacgcaccagcccgggcacctctcctcgcaccagcctggccgaagacagc
tacctgggccgctccccttcccccaggcccggctctcgctccacctctccgcagggcaag
cgcacctacgacatgtacagaaaccccaacctgatagcccgttcacgcagcccttctccc
cacggcggccatgatgaccaccaccccaccaaccattatagtcccaacaccctgccagag
gtcattaatggcttcggacagcctggtacaatgccccccaagatagtcaaaaccaaccag
caaccctacgccctctacccagatgcccacacagagggctacctgatgtcatgtgaccaa
gacatcaagaccaaaaccgagcctttcttcgtcatcccttccctgccctggcccaagcag
ctgatgcctggcatctgcagcatcccggtgacctccctgccgtctctggagtggcccctg
ccaagccgcacggaccagtatgaattacgcattgaagtgcagcccaagccccaccacagg
gcccactacgagacggagggcagccgtggggccgtcaaagctcagactgggggtcaccca
gtggtccagctacatggatacagaggtaaagagccactggggctgcagatcttcattggc
acggcagacgagcgtatcctgaagccccacgccttctaccaggtgcaccgcatcacgggc
aagaccgtcaccaccaccagctacgagaagatcatccacagcaccaaggtcctggagatc
cctctggagccgaagaacaacatgaaagcaataatcgactgtgccgggatcctgaagctg
aggaacgctgatattgagctgaggaaaggtgagacggacatcgggaggaagaatactcgt
gttcggctagttttccgagtacacatacctcagccgggaggccagcatatgtctcttcag
gtggcatcgcatcctattgagtgctctcaaaggtcagcgcatgaacttcccatggtggag
aagcaggacatggacagctgttcagttctggggggtcaacagatgattcttacaggacag
aatttcagcgctgactctaaagtgatcttcactgagaagacccacgatggacagcaaatt
tgggaattggaggccacagttgacaaagacaaaagtcagccaaacatgctgttcatcgag
gttcccccttaccgagacccatctatctgccatccagctaaggtcaacttctacgtgatc
aacgggaagaggaagcgcagtcagcctcagcacttcacatacacacccctgccagctccg
tccatcaaaaccgaaccagtggacgaatacgagactggacaaatgggttacatctctcag
attctgggagcttcagcccaaacctactaccaccacaacccacgtgcagtcctcaaccca
gacagtggcctggtccccagcctggcgtcctgccagcagacccggccaggcatctccccg
ccggacccccgcttccagcagcacagtcccgccatcgtttactcccgcactgagaagagc
ttaggcggcagcctctactctcaaaccggatccagcatggtgccggacccgcatcgctcc
gttctggtccacaccggttctccagcccagtcctctccactcagtgcccagcattcctcc
acccagcatcccaccatcatccagttctcccccaccaaccaccacaaccagcacctgctg
cgaggaggagaccccccagccccaccacccccagagcaccagcacatcatctactgcgag
ggctacaacagtcagcacggagcccaagcggcaactacccgatccccagctcccgcacaa
gccccccacccccagcactatcccaccgtcatccagcagcagcagccctacgcccagaga
agcgccaaagacagatcccctcccggccaggcggatccacagaggtgttcccctgctgag
gaacagagagcctccgtacctggacgggtcaccgtcaagcaggagaacctggatcaggcc
tacctggatgatgtaaatgagatcataaggaaggatctgacgggcgtgcacagcagagga
cagacataa
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