KEGG   Astyanax mexicanus (Mexican tetra): 103038710
Entry
103038710         CDS       T05042                                 
Symbol
ssrp1a
Name
(RefSeq) FACT complex subunit SSRP1a
  KO
K09272  FACT complex subunit SSRP1/POB3
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:amex03000]
    103038710 (ssrp1a)
   03036 Chromosome and associated proteins [BR:amex03036]
    103038710 (ssrp1a)
Transcription factors [BR:amex03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG2-related
    103038710 (ssrp1a)
Chromosome and associated proteins [BR:amex03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    FACT complex
     103038710 (ssrp1a)
SSDB
Motif
Pfam: PH1_SSRP1-like Rttp106-like_middle SSrecog POB3_N HMG_box SSRP1_C HMG_box_2 HMG_WDHD1 DUF4543 FERM_C1_MyoVII
Other DBs
NCBI-GeneID: 103038710
NCBI-ProteinID: XP_022539225
Ensembl: ENSAMXG00000014826
LinkDB
Position
10:complement(23018331..23035054)
AA seq 710 aa
MGDTLEFSDIFQEVKGCWNDGRLRFSKQTVVYKSNKTGKVDSIPVPDLSLAQWRRVCLGH
GIKLATSNGHIYKYDGFKDTDFEKISAFFKANYKVELTEKDMCVKGWNWGTAKFSGPLLS
FDINDSPAFEIPLASVSQCATGKNEVTVEFHQNDDAEVSLMEVRFYVPPNAADDGTDPVE
VFSQNVLSRADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDVNLTLNMSEEEVERRFE
GKLNKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLSIKNRGLREDMKKKDGYSDSDEDEHDAYLERMKEEGKIREEGDDDSEGDESDESFN
PGEEEDDVAEEFDSNASVSDSEAEDGDSEDEGKKKKPEKKPKKAPKEKKEKKERKPRREK
KVKDAGAPKRPMSAYMLWLNASRERIRSENPGISITEISKKAGEMWKQIDKSSKEEWDKK
AEEAKRQYEKAMKEYKESGGGGASSSAVKEKKKKVVKADTKKRKSGGESERDKSMNDSFK
SKEFISSEESSSESDHGKSKKRKSDDEEEDEDEEEVASTPPSSENESGSD
NT seq 2133 nt   +upstreamnt  +downstreamnt
atgggagacacactggagttcagtgatatttttcaggaagtcaaaggctgctggaatgat
ggacgcttgaggttcagcaagcagactgtggtctacaaaagcaataagactgggaaggtg
gacagcattcctgttcctgatctctctcttgcccagtggcgtcgtgtctgtctggggcat
ggaatcaaactggccacgagtaacggacacatctacaaatatgacggctttaaagacaca
gactttgagaaaatctccgccttttttaaggcgaactacaaggtcgagctgacagaaaag
gatatgtgtgtgaaaggctggaactggggcacggccaaattctcagggccacttttatca
ttcgacattaatgacagccctgctttcgagatccccctggccagtgtgtcccagtgtgcc
acaggtaaaaacgaggtcacagtggagttccatcagaacgatgatgctgaagtatcactc
atggaggtgcggttctacgtcccgcccaacgctgcagatgatggcacagaccctgtggag
gtgttttctcaaaatgtcctgtcccgagcagacgttatccaggctactggtgatgccgtg
tgcatcttcaaagagctgcagtgtcttacaccaagaggaaggtatgatattcgtatctac
cccaccttcctgcacctgcacggaaagacgtttgactacaagattccctacaccaccgtc
ctgcgcctctttctgctgccgcataaagatcagaggcagatgttctttgtgatcagtttg
gacccgcccattaagcagggtcagacccgctatcacttcctgattctcctcttttccaaa
gatgaagatgtcaacctcactctcaacatgagcgaggaggaggtggagcggcgctttgag
ggaaagctgaataagaacatgtctggctctctctatgaaatggtcagcagggtcatgaag
gctctggtcaacagaaagatcacagtgcctggaaacttccagggtcattcaggagctcag
tgtatcacatgctcatacaaggccagctcaggactgctgtaccctctggagaggggcttt
atctacgtgcacaagccccccgtgcacttgcgcttcgaggagatctcctgtgtaaacttt
gctcgaggcaccaccaccactcgctccttcgacttcgagatcgaaaccaagcagggcaac
cagtacaccttcagcagcatcgagagggaagagtacggcaagctgtttgactttgttaat
gccaagaaactgagcatcaagaaccgaggattaagagaggatatgaagaaaaaggatggt
tatagtgactctgatgaagatgagcatgatgcttatctggagaggatgaaggaggagggc
aagatcagagaagagggtgatgacgattcagagggtgatgaaagcgatgagtcctttaat
cctggagaggaggaggatgatgttgctgaggagtttgatagtaatgcctcagtcagcgac
agtgaggcagaagatggtgacagtgaggatgaaggaaagaagaaaaagcctgaaaagaag
cctaagaaggcaccaaaggaaaaaaaagaaaagaaggagcgaaaaccacgcagagagaaa
aaggttaaggatgcaggagcccctaagaggccaatgagtgcctacatgctatggctgaac
gcgagccgagaacgcatcaggtcggagaaccctggaatctccatcactgaaatctccaag
aaagcaggagagatgtggaaacagatcgataaaagcagcaaagaggagtgggacaagaag
gcagaggaggctaagagacagtacgaaaaggcaatgaaggaatataaggagtctggtgga
ggaggagcctcatcatctgctgtcaaagagaagaaaaagaaagttgtcaaagcggatact
aagaaaaggaagagtggaggagagagcgagcgagataagagtatgaacgacagctttaag
agcaaagagttcatctccagtgaagagagctcatctgagtctgaccacggcaaaagcaaa
aaacgcaagtctgatgatgaggaggaggatgaagacgaggaagaggttgcctccacacca
ccaagctccgagaatgagtcaggatctgactga

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