Astyanax mexicanus (Mexican tetra): 103038778
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Entry
103038778 CDS
T05042
Symbol
rpn1
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex00510
N-Glycan biosynthesis
amex00513
Various types of N-glycan biosynthesis
amex01100
Metabolic pathways
amex04141
Protein processing in endoplasmic reticulum
Module
amex_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
103038778 (rpn1)
00513 Various types of N-glycan biosynthesis
103038778 (rpn1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103038778 (rpn1)
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Gene cluster
GFIT
Motif
Pfam:
Ribophorin_I
DNA_repr_REX1B
FliD_C
AIP3
BAR_4
DUF2203
Motif
Other DBs
NCBI-GeneID:
103038778
NCBI-ProteinID:
XP_007228788
Ensembl:
ENSAMXG00000017141
UniProt:
A0A8B9K782
W5LD82
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Position
24:25205797..25215057
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AA seq
604 aa
AA seq
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MQRPGAAVCLSPWLVLALGWALSGAAAADGLLNEEVKRTVDLSTHLAKVSSEILLANQGS
SPVHSFTLALEPELGPHLAFIGASVKGEEEEDEALELKETALQGRSGTFFQVQLPSALAA
GGKLRVKVETVLSHVLRPFPTHITQAERQLVVFQGNHYLYSPYPTRSQTTRVRLASKNAE
SYTKLGNPSKNDEVIEYGPFKDVAPFSQDTMKIHYENNSPFLTISSITRTIEVSHWGNIA
VEETIDLRHTGAYLKGPFSRYDYQRQSDSGISSVKSFKTILPASAQDVYYRDEIGNISTS
HLQVLEDSVEVEVRPRFPLFGGWKTHYIIGYNLPSYEYLYTLGDQYALKMRLIDHVYDDQ
IIDHMTVKLILPEGARNVHLDTPYSIDRSPDQLHYTYLDTFGRPVLVATKSNLVEQHIQD
VVVHYTFNKILMLQEPLLVVGAFYILFFTVIIYVRLDFSITKDPAAEVRMKVASITEQVL
TLVNKRLGLYRQMDEVVNRYKQSRDTGALNSGRKTLEAEHRNLTNEIAALQARLKTEGSD
LAEKVGEIQKLDGQVKDLVCQSCQESERLVAGKVKKETYITSEKTLSGKKQELISRIDSL
LDAL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcagagaccgggagccgctgtgtgtctgagcccctggctcgtgctggcgctcggctgg
gcgctgagcggggccgcggctgcggacgggctgctgaatgaggaggtgaagcggacggtg
gatctcagcactcacctcgccaaggtttcctccgagatcctgctggccaaccaggggagc
agcccggtgcacagcttcaccctggcgctggagccggagctcgggccgcacctggctttt
atcggggcttctgtcaaaggtgaggaagaggaggatgaagctctggagctgaaggagact
gctctccaaggaagaagtggtacattcttccaggtgcagctgccctctgctcttgccgct
ggtggaaagctgcgggtaaaggtggagacagtgctgtcccatgtgctgcgcccgttcccc
acacacatcacccaagctgagaggcagctggtggttttccaggggaaccattacctgtac
tctccataccccacccgcagccagaccacccgtgtgcgtctggcctccaaaaatgctgaa
agttacaccaaactgggcaaccctagcaagaacgacgaagtgattgagtacggcccgttt
aaagatgtcgctcctttcagccaggacaccatgaagatccactatgagaacaactcgccc
ttcctcaccatcagcagcatcacccgcaccatcgaggtttctcactggggcaacatcgct
gtggaggagaccattgacctgagacacactggggcttacctgaagggacctttctcccga
tacgattaccagagacagtccgacagtggcatctcctctgtcaagtcttttaagactatt
ctccctgcctcggctcaggacgtgtactaccgtgacgagatcggcaacatctccacctcc
cacctgcaggttctggaagactctgttgaggttgaagtccggccacgctttccccttttt
ggaggctggaagactcattatattatcggctacaatctgcccagctatgagtatctttat
accttgggtgatcaatatgctttgaaaatgcgcctgattgatcacgtctatgatgaccaa
attattgatcacatgactgtcaagctgattcttccagagggagccaggaacgtacatttg
gacaccccgtactccatcgaccgttctcctgatcagctgcactacacttacctagataca
tttgggaggcctgtgctcgtcgccaccaagagtaacctggtggagcagcacattcaggac
gtggtggttcactacaccttcaacaagatcctgatgctgcaggagcctttgttggtggtt
ggggctttctacatcctcttcttcacagtcatcatttacgttcgccttgacttttctatc
actaaggatccagctgcagaggtgcgtatgaaggtggcctccatcacggagcaggtcctg
accctggtcaacaagaggcttgggctctacaggcagatggatgaagtggtgaaccgctat
aagcagtctcgagacacgggggcccttaacagtggccgcaagactctggaggcagagcat
cgtaacctcaccaacgagatcgcagccctgcaggcccggctcaaaaccgagggctccgac
ctggctgaaaaggtgggtgagatccagaagctggatggccaagtgaaggacctggtgtgc
cagtcctgccaagaatcagagcggctggtggcgggtaaggtgaagaaggagacgtacatc
acatctgagaaaacgctgagcggcaagaagcaggagctcatttcacgcatcgacagcctc
ctcgacgctctgtaa
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