Astyanax mexicanus (Mexican tetra): 103038823
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Entry
103038823 CDS
T05042
Symbol
fan1
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
103038823 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amex03400
]
103038823 (fan1)
Enzymes [BR:
amex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
103038823 (fan1)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
103038823 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
PRP21_like_P
zf-TRAF
BsuBI_PstI_RE
Motif
Other DBs
NCBI-GeneID:
103038823
NCBI-ProteinID:
XP_022535446
Ensembl:
ENSAMXG00000020438
LinkDB
All DBs
Position
9:26447581..26461457
Genome browser
AA seq
1002 aa
AA seq
DB search
MDSSASKSQTKDQAKPHKSLSLAKKDVQKGKTKANTSNKQNGLSITSFFKNTPPSKLACP
LCSKLIPRFKINEHIDSQCRDFIEENYREASSGNRNKQQQKTLSPLPDNVSQSPEEKNTD
ANIQGKSAKTSPYFKKNCTARQESPKASCQDKVVKTVSLGSLSSKLSRRALKFSGNHKAE
NTAPAANVEPNCSESSSSQKENCDENFSIKSAQVLHSEVATVNLPPVENGDEIKETPPNM
EPLSTEVPQSEKTAAGFKLMKRKNKESSDAHLASKVQKKQRSLRSRRENNTFPLFNQNQT
SNGTSPSPESEVKKEAKPADEERDQIMEEGGSNDLPTESSVEPGDSPRRPYYLQNFLTIL
EAVLENKDDVVLFNDEDLSFVHSFKQLSVPGQMLYVRLFQRKLKWLQVSKLEYSEISSAL
KPVVQELISAGLLQTESELKDIQEVLDLLPAPELRGLAKTFHLGGPGNSTQKQQLVEGLL
RLAKQRSLFALSPGQGHTGAVILKRAKQLAGSCVRLHRGPRAVFSRVLLLFSLTDTLEEE
ETAAGGQGQLYTILLVNSGRLAFPAYTVQRSAQVFMDRDDLIRYEAAMRSLQEVIAAMQT
GCWEDALALYTTAKATWQDLKKTCDLSCHEELPVFLRCFTVGWAYTRIFSRGVEILQRLR
RYEEAVKELRSLLSQSVFCPDSRGRWWDRLALNLQQHLKQHEQAICAIRDGLHDPLVRTG
HRLSLHQRAARMKESASFKKYRLLLRELPTLHVKDVTHVTIRGQLFPHEGGTGKSVFLRP
ASGDEGSEDGDNAMVICSVEELALAHYRKLGFDQGIHGEGSTFSTLFGLLMWDIIFMEGI
PDVFRTPYQTCPLDLHTDTFFKNRLEAIEARAELLREASTETLHEMVAEVWNTQEGKVCT
LVNWERFSSLLQAQSFLACLGGGFLSGVVLRMAKDYRHSRGGLPDLVVWNSSANSCKLVE
VKGPNDRLSQKQQLWLEELQNLGADVEVCHVTAIGARGARLD
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggattccagtgctagtaagagtcaaaccaaagaccaagcaaagccccacaagagtctt
tctctggcaaaaaaggatgtccagaaaggcaagacaaaagcgaataccagtaataagcaa
aacgggctttctatcacttcattttttaagaacactcccccatccaaactggcctgtcca
ctatgcagcaagctgatacctcgcttcaagatcaatgaacacattgactctcagtgtcgg
gactttattgaggaaaattacagagaagcttcatcaggaaaccgaaataaacaacaacag
aaaaccttgtcgccacttccagataatgtctctcagagtccagaggagaaaaatacagat
gcaaacatccaaggaaagagtgcaaaaacaagcccatattttaagaagaattgcacagca
aggcaagagtcacctaaagcaagctgccaagataaagtagtcaaaacagtcagtcttggt
agtttgtcttcaaaactgtccagaagagcactgaagttctcagggaaccataaagctgag
aataccgcacctgctgctaatgtagagcctaactgtagtgaatcaagtagttcacagaaa
gaaaactgtgatgagaatttcagtattaagtctgctcaagtgctccattctgaagtagct
acggttaatctacctccagtggaaaacggtgacgaaattaaggaaactcctccaaacatg
gaaccactgagtactgaggttcctcagtcagagaaaactgctgcaggatttaagttaatg
aagcggaaaaacaaagagtcttctgatgcacatttagcctcaaaagtgcagaagaagcaa
agatctcttcggagtagacgtgaaaacaacacatttcctctgtttaaccagaaccagaca
tcgaatggcacctctccttcacctgaatctgaagtcaaaaaagaagctaaacctgcggat
gaagaaagagatcaaatcatggaagaaggtggaagtaatgatctccctactgaaagctct
gtggaacctggtgattcacccagacgaccatattaccttcagaacttcctgaccattctg
gaagcagtgttggagaataaggatgatgtggttctctttaatgatgaggacctttccttt
gtgcacagtttcaagcagctgtcagtgccgggacagatgctgtatgtgcgtctgttccag
aggaagttgaaatggctgcaagtgagcaaactggagtattctgagatcagctcagctctt
aagcctgtggtgcaggagctcatcagtgctggcctcttacaaacagagtctgaacttaag
gacatccaagaggttcttgatcttctaccagcaccagagctcagaggtctggccaaaacc
tttcacctaggaggtcccgggaacagcacacagaaacagcagctggtagaaggacttctc
cgcctggccaagcagcgctcactctttgccctttcacctggtcagggccacactggtgca
gtcattctcaagagggcgaagcagctagcaggttcctgtgtgcgtctgcaccggggcccc
cgtgcagtattctcccgtgtcctgcttctcttctcccttacggacacgttagaagaggaa
gagacggctgctggaggtcagggccagctctacaccattcttctggtcaactctggacgc
ctggccttcccagcatacaccgttcagcgctctgctcaagtgtttatggacagagatgat
ctaatcaggtatgaggccgccatgcgatctcttcaggaagtgattgcagcaatgcagact
ggctgctgggaggacgcactggcgctctacaccacagcaaaggccacctggcaagacctt
aagaagacatgtgacttaagctgtcacgaggagctaccagtgttcctacgctgtttcact
gtgggctgggcgtacacacggatattttctcgaggagttgagattcttcagagactgcgt
cgctatgaggaagcagtgaaggagctccgttctcttctttctcagtcagtgttctgtccg
gacagcagagggcgctggtgggacaggctggctctcaatcttcagcagcacctcaaacag
catgagcaggctatctgtgctatccgggatggactacacgatcctctggttcggacaggt
caccgtttgtcactacatcagagagctgccagaatgaaggagtctgcaagttttaagaag
taccgcctgctgcttcgtgaactacctactctacatgtgaaggatgttactcatgtgacg
attcgagggcagctgtttcctcatgaaggtggcacgggtaaatcagtgttcctcagacca
gcttctggggatgagggttctgaggatggagataatgccatggtcatatgctctgtagaa
gagctggcattggcacactacagaaagcttggctttgatcaaggcattcatggtgaaggt
tctacattctccaccctgtttggtcttctaatgtgggacatcatcttcatggagggcatt
cctgatgtcttccgaactccctatcagacatgtcctctggacctgcacaccgacactttc
tttaagaatcggctggaagctatagaggcacgggcagagctgttgcgtgaagcatccaca
gaaacgctgcatgagatggtggctgaagtgtggaacacccaggagggaaaagtttgtaca
ctagtcaactgggaacgattttcatctcttctgcaagctcagagctttctggcatgtctg
ggaggtggctttttaagtggcgtggtccttcgaatggccaaggactacagacacagcaga
ggagggcttccggacctggtggtgtggaattcctcagccaatagctgtaagttggtggag
gtgaagggtcccaacgaccgtctatcccagaaacagcagctttggctggaggagctgcag
aatctgggggctgatgtggaggtgtgtcacgttactgctattggagctcggggagcacga
ctggattaa
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