Astyanax mexicanus (Mexican tetra): 103038885
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Entry
103038885 CDS
T05042
Symbol
shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SH3_2
Ank_5
SAM_2
PDZ_6
PDZ
FERM_f0
SH3_1
SH3_9
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
103038885
NCBI-ProteinID:
XP_049323852
LinkDB
All DBs
Position
19:complement(18703902..18971180)
Genome browser
AA seq
2491 aa
AA seq
DB search
MTMPLSPLSSDEEQQRMLGNSQHLYPGAEEEEEDEEEEEELDDEYQDEEGQEEENGELDG
EEEEEEEEEDVRRGGGGGGGGHLGGRDEGHRQKGTMAGRPAAERQIRGGNPGHTTNPYSS
NPGPAHQPTANQQQPKRIRERSSSSAPDDTHIAMMVFRIGIPDIKQTKCLRFNPEATVWK
AKQQVLCSLTESLRDVLNYGLFQPATDGHDAKFLEEERPLRDYPQSFEKGVPYLEFRYKT
RVYKQTNLDEKQLAKLHTKASLKKFMDYIQTGSVEKVAKFLDKGLDPNYHDPDTGETPLT
LAVQCEPGAGEVIRVLVMGGAHIDFRAKDGLTSLHKAVRAHAHTALLTLLSLGASPDYKD
RRGLTPLYHTVLTGGDTSCCETLLYHRAKLGLRDENGWDETHQACQNGNSQHLEHLLFYG
ADSTSQNASGNTALHICALYNKESCARILLYRGAKKDTKNNSGQTPFQVAVMSGHFELGE
IIKNHRDSDVVPFLESPKYAPQRRESGRTLALPHPHPFLRANSDNSMNLPEWMAFPNAAG
SNIVSVQGLKHGGTLRSSSSPRGARTRSPSRGRTGDREDRSRQTRGRQGPGSISSQGTAP
GQRRRLYSAVPGRVFVATRSHSAQGEREISFNKGDKVKVLSIGEGGYWEGTVRGRTGWFP
SDCVEEIAPRSLDHRSESRSEKAKRLFRHYTVGSYDSFDAPSDYIIKEKTVLLQKKDSEG
FGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKV
GHRQVVNMIRQGGNSLMVKVVMVTRNPDMEEGSRKKIPQQSKRLSTPAIALRSKSMTSEL
EEMVDRASAPWKKKSEFESSQATEKKRTVYQMALNKLDEILAAAQQTISTNETPVPRTQG
VKRERGRGFYNEQNFDQSGMGLTSSGAGLGFDRGPFVSGHAPQHGMLRQKSIGVPEEEKQ
FLHPPAMKFARSLSVPGPDDIPPPPTTAPPDPPFSSAPPLGWRGKTSQQPSVSVSQSTST
SSHYQLYSQSSHFAHGPRDRSPGPPTSSAAADHATSYSHAQSHSSVPSRTASRKVVGYTG
DSASAGGAAGARSAGLRRGYSNAVPPTSVATVIPQQQQTTQSQPARTERGAAGSTAAAGV
PKGGVRRGKGPLVKQSKVEDLRSGQGTLVGKSSVEKSSIPIPTIIVKAPSTSSSGRSSQG
SSVEAEPPPSSESEISKPPPGAPPPAPTMPPPAPPSIPAPPPPSLPPLRAQESLDFTSQF
GAAIVGAARRDRERFHEARRKSASFFLSAEEELAGSTGGLGGGTGRSQVSQQPQQQQLGT
QPSPRLRPSKSIDEGMFSGDTFIHHARSMPPAFGLPEYSTQAPSGDYQPKSVPADFYLAG
SRQQPQQQQQPPTTTFIHPLTGKVLDPSSPLGLALAARERALKDDGRMRRERGEHHFSRQ
LSSVGAFPPSHSVAPSASVSSSAAQSSSSSSYLVTSSSLAATTPSTRPPSPRILRGTGGG
WGDDGMAGERSEREAPGAAPSSREGLRVRFSEDKTVHTHHYQSQHYQPTQKERERERQRE
RSREREREREREREMERVQSQQQPQPSAQPTTQQPRRPSFLRMESEAGAYILSLTPPSPP
ATAAPTHPGGGGTGGEGSSGGGSLMVLPPPAPSVDADDEFVFADPLPPPLEFANSFDRGA
GYSGMMANNVAIRQQQQHRHPPPPPPPPPPPPQKDTFITGFPAHTPLPSPQAGDSTASSL
TSYDSEVANLTQSAPSPSPSSPNPPPPASPSRLQPSGPPPPPSVSPPPPPTSYHRPFSLA
QSHHLYNSAPTTGRASSPTPPPVSIPAPPAYRGPPAAPSTAATSAPLRGTFTLSTTATCA
TATTTTASIAASTATGIASNIGMTPYTQRIATVSTVATGSGSRRASAEHHPPPTSVSGKS
GESQETVVDSGIEELDSRSSSDHHLDNILALSGRERLERMGMGSLGGSGERVGGMVESDR
LSGADFLESYMSYLDGQTFEMHNAKAASPASTYPKTQRFREGSRAGDLRRQTSTAPPAYH
RRREEEEPEEEEPEEGEEEDVSTRDGYGIREGQGLARSSVMYFDRPRTPEMKPLWGEGSG
GAGQGIGDSGTQAGGTYMEGRKLHPPMSGMKASIISELNTKLQQRSKGIESWGSQRSLSR
HRFSEDSTGALSPPSVRSPSPSPLSQPNLSPSPTASSQPPLYPHWARSPSPQPPAATSQP
PPARSHSPVSPSSAYAPYPTSPKHRPVYRTKALEFQFIPSRESRKAESHHSQRRRAPSPL
ISPSDRPKLGPPRPSSLPILPTTPLYSSLYDLRGSITPPSPANPLGDPYFSPSPPLFAPS
GAPPPPNSSLVVSRSLSPTHFLSGTSSPPLHSIAPPTCLSYPHLPPPSPSKPFASKPLPY
WTKYDVADWLAYLNLAEHRERFLDNEIDGTHLPSLTKEDYLDLGVTRVGHRMNIERALRR
VMDRLSSSFPISALSPRDGRTERTRDEGPRR
NT seq
7476 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccactcagccccctgtccagtgacgaggagcaacagaggatgctgggaaac
agtcaacacctttatccaggggcggaagaggaagaggaggacgaggaggaagaggaggag
ttagatgatgagtatcaggatgaggaagggcaggaggaggagaacggggagcttgatgga
gaggaggaagaggaggaggaagaggaggatgtaagaagaggaggaggaggaggaggagga
gggcatctagggggcagggatgaggggcacaggcagaaaggcaccatggcaggacgtcca
gcagcagagcgacagatccgagggggaaaccccggtcacaccaccaacccctactcatct
aaccccggccccgcccaccaacccacggccaatcagcagcagccgaaacgcatcagagag
aggagctccagctccgcccctgatgacacacacatcgccatgatggtgtttcgcatcggc
atccctgacatcaaacagacgaagtgcttgcggtttaaccctgaagccactgtatggaag
gcaaagcagcaggtgctgtgcagtctgaccgagtctttacgggacgtcctgaattacggt
ctcttccagccggccactgacgggcacgacgccaagttcctggaagaggagaggccactc
cgggattacccacagtcctttgagaaaggggtgccctacttggagtttcgatacaaaacc
agagtatacaagcagaccaacctcgatgagaagcaacttgccaagctgcacaccaaggcc
agtctgaagaagttcatggactacatccagactggatctgtagagaaggtggccaagttt
cttgacaaaggcctcgaccccaactatcatgaccccgacacaggagagacccccctcacg
ctcgcagtgcagtgtgaaccaggggctggggaggtgatcagagtcttggtgatgggcgga
gctcatatcgacttcagggccaaagatggcctcacatctctgcacaaggccgtccgagct
catgcacacaccgccctgctgactctgctgtctctcggggcatctccggactacaaggac
cgccgtgggctgacgccgctttaccacactgtgctgacagggggcgacacctcctgctgt
gaaaccctcctctatcacagggccaagctgggcctccgagatgaaaatggctgggacgag
acccatcaggcctgtcagaatggcaactcgcagcatctggagcacctccttttctacggc
gccgactccacatcccagaacgcctcaggaaacactgccttgcacatctgtgctttatac
aacaaggagagctgtgcgcgcatcctgctctatagaggagctaaaaaggacacaaagaac
aacagtggccagacacccttccaggtggctgtgatgtctggccattttgagctaggagag
atcatcaaaaaccatcgggattcagacgtagtgccgtttctggagtcacccaagtacgcc
ccccagaggcgggagagtggacgaacacttgctttaccacatccgcacccattcctaaga
gccaacagtgataacagcatgaacctacctgagtggatggccttccctaatgctgctggc
tctaacatcgtctctgtgcagggcctgaaacatggcgggacactgcgcagctccagcagt
ccccgtggtgccaggacccgctccccgtcccgcggacgaacaggagacagagaagatcgc
agtcggcagactcgcgggagacaggggcccggctctatcagcagtcagggtacggccccg
gggcagcggaggcgtctgtacagcgctgtaccaggacgagtgtttgttgccacgcgctca
cactccgcccagggagagcgtgagatcagcttcaacaaaggagacaaagtcaaagtgctg
agcatcggtgaggggggatactgggagggaacagtgcgcggcaggacaggctggtttccc
tcagactgtgtggaggagatagccccccgcagcctggaccaccgctcagagagccggagc
gagaaagccaagcggctcttccgccattatactgtgggatcctacgacagctttgacgca
cccagtgactacataatcaaggagaaaacagtgctcctgcagaaaaaagacagcgagggt
tttggctttgtgctgagaggggccaaggcccagacccctatagaagagttcacacccacc
ccagcctttccagcactgcagtaccttgagtctgtcgacgagggaggcgtggcctggaga
gctggactaagaatgggtgacttcctgattgaggtgaacggtcagaatgtggtgaaggtc
gggcacagacaggtggtcaacatgatccggcaaggtggcaacagtctcatggtcaaggta
gtcatggtgacccggaatcccgacatggaggaggggtcgagaaagaaaatcccacagcag
agtaagaggctgagcacgccggccattgcactgcgatccaagtccatgacctcagaactg
gaagagatggtcgacagagcttcagccccatggaaaaaaaaatcagagttcgaatcctca
caagctacagagaagaagaggacagtctatcagatggctctgaataaactggatgagatt
ttagccgcagcacagcagaccatcagtaccaacgagacaccagtgccacggactcagggg
gtgaagcgggagagaggccgaggcttttataatgagcaaaattttgaccaatcagggatg
ggattgacgtcatctggggcagggttgggattcgaccgtggcccatttgtctctggccac
gctccccagcacggtatgctgcgacagaagtccatcggggttccagaggaggagaagcaa
tttcttcatcctccagccatgaagtttgcacgaagcctctcagtccctggcccagatgac
attccccctccccccaccacggcaccccctgatcctcctttctcctcagcaccccctctt
ggctggaggggaaagacatcccaacaaccctcagtatcagtttcccagtctacctccacc
tcgagccactatcagctttactctcagtcatctcactttgctcatggacccagagatagg
tcgcctggaccccctacaagctctgcagcagcagaccatgcaacttcttactcccatgcc
cagtctcactcctctgtccccagtaggactgcctccaggaaagtggtgggttacacagga
gattcagcgtcggctggaggtgcagcaggagcacgatcggctggtttgaggagaggctac
agcaatgcagtcccacccactagtgtggccacagtgatcccccagcagcaacagaccacc
cagagccaaccagcaaggacggaaagaggtgcagctggatcgacagcagcagccggagtc
ccaaaaggaggtgtgcgaagaggcaagggaccactagtcaagcagtccaaggtagaagac
ctccgttctgggcaaggcacgctagtagggaaaagttctgtggagaaaagctctatccct
atccctaccatcatcgtgaaagcaccctccacaagcagcagtggacgcagtagccaagga
agcagtgtggaagcagagcctccacctagtagtgaaagtgaaatttccaaacctccacct
ggagcaccaccacctgcccctacaatgccccctcctgcgccaccctccatccctgcacct
ccacccccttcacttcctcctttgcgggcccaagagagcctagactttaccagccagttt
ggggctgctattgtgggagcagctcgtagggatcgcgagcgctttcacgaagcccgtcgc
aaaagcgcctcctttttcctttcagctgaggaggaattagcgggcagcactggaggacta
ggaggaggaacaggaaggagccaggtgtctcagcagccccagcagcagcaacttggcacc
caaccttcaccacgcctgaggccctccaaatctatagatgaaggcatgttctctggagac
accttcattcaccatgcccgtagcatgccacctgcctttggactgcctgagtactccact
caagctccatcaggggactatcagcccaagtctgttcctgctgacttttacttggcaggt
agccgtcagcagccacaacagcagcagcagcctcctaccaccactttcatccatccctta
acaggaaaagtcctggacccttcatctcccctgggacttgctttggctgctcgggagcgt
gccctgaaggatgatgggcgcatgcgcagggagaggggtgagcaccacttcagccgccag
ctatccagtgtgggagccttccctccttctcactccgttgctccatcagcctctgtcagc
tcttccgccgctcagtcctctagctcttcctcatacctcgtcacttcatcttctttggcc
gcgactacgccttccacacgacctccatcacccaggatcctgaggggaacaggaggaggt
tggggagacgatggaatggcaggggaacgaagtgagagggaagcacctggagcagctcct
tcatcccgggaaggactaagggtccgtttctctgaggataaaactgtccacacacaccac
taccaatctcagcactaccaacccacccagaaagaacgggaaagggaacgacagagggaa
cgttcacgggaaagggagagggagagagagagggaacgtgagatggaaagagttcagagt
cagcagcagccacagccatctgcacagccaactactcaacagcctcggagaccatccttt
ttgagaatggaaagtgaggctggagcatatattctgtccctgactcccccttcacctcca
gccactgctgcacccacacacccaggagggggagggactgggggagaaggatccagtggt
ggtgggagtctcatggtcctccctcctcctgcaccatcagtagatgcagatgatgagttt
gtgtttgccgatcctttaccacctcccctggagtttgctaacagttttgacagaggagca
ggttattccgggatgatggctaacaatgtggcgattaggcagcagcaacagcatcgtcac
ccccctccacctccaccacctcctcctccacccccccaaaaagacactttcataaccggc
ttccccgcccacacaccactgccctctccacaggccggcgactctaccgcctccagtctt
acttcctatgacagtgaagtggcaaatctgactcagtctgccccttcaccatctccatcc
tctcccaaccctcctccaccagcttcgccttccagattgcaaccttctggccctcctccc
cctccttctgtgtctcctcctcctccacctacctcataccatagacccttcagcttagcc
cagtctcatcatctctacaacagcgctcccacaacaggtcgtgcttcttcccccacacct
ccacctgtctcaatcccagctccccctgcataccgaggacctcctgctgctccttcaacg
gctgccacgtctgcccctttgaggggcacctttaccctgtccacgaccgcaacctgtgct
acagctacaaccaccactgctagtattgctgctagcactgctactggcattgccagtaac
attggtatgaccccttacacccagcgcattgcaactgtttccacagtggctacaggaagt
ggtagtaggcgggctagtgcagagcaccacccaccaccaacctcagtgtcaggcaagagt
ggggaatcccaggaaactgtggtggattctggaatcgaggagctggacagtcgtagcagc
agtgatcatcatctggacaacatccttgctctcagtggaagggagaggttggagagaatg
ggcatgggaagtttgggtggaagcggagagagagtgggaggaatggtggagagtgacagg
ttaagtggagcagacttcttggagtcctacatgagttacctggatggacagacttttgaa
atgcacaatgccaaagcagccagccccgcatccacatacccgaaaacgcagcggtttaga
gagggcagccgggccggtgacctcagaaggcagacaagcacggctcctccagcataccac
aggcgacgagaggaagaagaacctgaagaagaggagccagaggaaggagaggaagaagac
gtgagcacccgggatggatatgggattagggaaggacaaggcttggcacgctcatctgta
atgtactttgatcgcccccgtacccctgagatgaagcctctttggggtgaagggtcaggg
ggggcagggcagggcattggggacagtggaactcaggctggaggaacgtacatggaagga
cgtaaactccatcctcccatgtccggcatgaaggcaagcatcattagtgaactgaacacc
aagttacagcagagaagcaaaggaatagagagctggggatcacagcgatcactgagcaga
cacaggttctcagaggactccacaggtgccttgagtccgccatcggtccgctcgccttct
ccatctcctctttctcagcctaatctgtctccctctcccaccgcctcctcccaacctcct
ctctatccgcactgggctcgttcgccatctcctcagcctccagctgccacgtctcagcca
cctccagcccgctcccactctccagtctccccttcctctgcttatgccccatatcccacc
tctcccaaacacaggcctgtgtatcgcaccaaagctttggaatttcagttcatcccaagc
cgggagtcccgcaaggcagagtcccatcactcgcagcgccgcagagcaccaagtccactt
atttctccctcagatcggcccaaacttggtccgccacggccatcttcccttcctatcctt
cccaccacacccctctacagcagcctctatgacctccggggctccattacccctccgtcg
cccgcaaaccctctgggtgacccctatttctccccttctccacctctgtttgccccttct
ggtgcaccaccacctccaaattcatctttggttgtgtctcgctccctctcgcccacccat
tttctctctgggacatcctccccacccctccactcaatagctccacccacatgcctcagt
tacccccacttgccccctccatcgccctccaaaccctttgcatccaagcccttgccctac
tggaccaagtacgacgtggctgactggctggcctatctgaacctggccgagcacagggag
cgcttccttgacaacgaaatcgatggcacgcaccttccttcccttaccaaggaggactac
ctggacctgggcgtgacccgggtgggccaccgcatgaatatagagagagcgctcaggagg
gtgatggacaggctatctagctcttttcccatttcggctctctcccctcgggatggacgg
acagagaggacaagggatgagggcccccggcgctga
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integrated database retrieval system
