Astyanax mexicanus (Mexican tetra): 103038965
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Entry
103038965 CDS
T05042
Symbol
rom1b
Name
(RefSeq) rod outer segment membrane protein 1b
KO
K17344
rod outer segment membrane protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amex03037
]
103038965 (rom1b)
Cilium and associated proteins [BR:
amex03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
103038965 (rom1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tetraspanin
LtrA
Methyltransf_22
DUF7357
Motif
Other DBs
NCBI-GeneID:
103038965
NCBI-ProteinID:
XP_007246445
Ensembl:
ENSAMXG00000035900
UniProt:
A0A3B1JUI6
A0A8B9KN01
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All DBs
Position
10:37435378..37441547
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AA seq
355 aa
AA seq
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MTVLKLKFSFQRRVRLAQALWLLSWVAMFSGVITFATGIFLKTELVRREEVMHNNDIHIV
PNLLIMVGLASVGINICAGKVCQDSLDASRFPRWKNILIPFFCISFLFTSMLLVAMIMSY
ALQPSLEESLKVGLKNGIRFYKDTDTPGRCFQKETIDRLQMEFQCCGNTNYRDWFEVQWI
NNRYLDFTSKEVKDRVRSNVDGRYLLDGVPFSCCNPASPRPCIQYQLLDNSAHFNYEYQS
EELNLYNRGCRQALVSYYMSLMNTIGPAVMSVFLIQMTVLLSLRFLQTSMEAVEGQENVE
IETEGYILEKGVKETIMELKEKVKNILNQVKVDAAPSQAEPTEEEAGEKEATPAS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcctcaagttaaagttctccttccagaggagagtgcgtttggcccaggccctc
tggctcctgtcatgggtggccatgttctctggagtcatcacctttgccacagggatcttt
cttaagacggaactggtccgcagggaagaggtgatgcacaataatgacatccacattgtg
cccaatctgttgattatggtgggtctggcatctgtgggcatcaacatctgcgctggcaaa
gtgtgtcaggactcgctggatgcctcgcgatttccacgctggaagaacatcctcattcct
ttcttttgcatttctttcttattcacctccatgctgctggtggccatgatcatgagctat
gccctgcagcccagcctggaggagtctctgaaggtgggcctgaagaacggcatccgcttt
tacaaggatacggacacaccaggccgatgcttccagaaggagaccattgaccgtctccag
atggagttccagtgctgtggcaacaccaactacagggactggtttgaggtgcagtggatc
aacaaccgttacctggactttacctccaaagaagtgaaagatcgtgtgaggagtaacgtg
gatggtcgctacctgttggatggagttccgttcagttgctgtaatccagcctccccgagg
ccctgcatccagtaccaactcctggataactcagcccatttcaattatgagtaccagtct
gaggagctgaacctgtacaaccgcggctgtcgtcaggctctggtcagctactacatgagc
ctgatgaacacaatcgggcctgcagtcatgtctgtcttcctcattcagatgactgtgctg
ctcagcctgcgcttccttcagacatccatggaggctgtagagggccaggagaacgtggag
atcgagacagagggatacattctggaaaagggagtaaaggagaccatcatggagctgaaa
gaaaaggtcaagaacatcttaaaccaagtgaaggtggatgctgccccatcccaggctgag
ccaacagaggaagaggcaggagagaaggaggccacaccagccagttaa
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