KEGG   Astyanax mexicanus (Mexican tetra): 103039099
Entry
103039099         CDS       T05042                                 
Symbol
wdr48b
Name
(RefSeq) WD repeat-containing protein 48 isoform X3
  KO
K15361  WD repeat-containing protein 48
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    103039099 (wdr48b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amex03400]
    103039099 (wdr48b)
DNA repair and recombination proteins [BR:amex03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     103039099 (wdr48b)
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_DCAF12 WD40_MABP1-WDR62_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_IP5PC_F WDR54 WD_LRWD1 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_NUP159_NUP214 RAWUL Nucleoporin_N Tfb2_C WD40_like DUF7349
Other DBs
NCBI-GeneID: 103039099
NCBI-ProteinID: XP_007250764
Ensembl: ENSAMXG00000019327
UniProt: W5LJ90
LinkDB
Position
8:54728274..54739074
AA seq 677 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKHNRNGVNALQLDPALNRLFTAGRDSIIRIWSIN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQANEAFTHIYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLRM
ELDRSADPSPAIWVSTTKSCVNKWSLKGMHNFRASGDYDNDCSAPLTPLCTQPEHAIKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKGEDLGKVEFDEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFTSPDGSDPKLNLGGLLLQALLEVWPRTHIN
PMEEEEGEVNHVNGEQESRLQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDTESQTTSSSTNEKPGEQEKEEDVAMLAEEKIELLCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcgacccatcacaggcagaacgctgcgggccggaggaaagtgcaggtttcttatgta
atcagagatgaggtggagaagcacaataggaatggggtgaacgctcttcagctggatccg
gccctgaaccggctctttactgctggcagggattccattatcaggatatggagcatcaat
cagcacaaacaggatccctacatagcgtccatggaacatcacactgactgggtgaatgat
atagttctctgctgtaatgggaagacattgatatcagcctcgtcagacactacagttaaa
gtctggaatgcacataaagggttctgtatgtcaacattaagaactcacaaggactacgtc
aaagctttggcttatgctaaagacaaggagttggtggcgtctgcggggctggacagacag
atcttcctgtgggatgtaaatactctaacagctctgactgcctccaataacaccgtcacc
acttcctctctgagtgggaataaagactctatctacagcctggccatgaaccagctgggg
accgtcatcgtctcaggctcaacagagaaggtcttgagggtttgggatccgcggacatgt
gccaagttaatgaagctgaaaggccacacagacaacgtgaagtctctattattaaacaga
gacggcactcagtgtttgtctggtagttcggatggtacgatacggctgtggtctctgggc
cagcagcgctgtatcgccacgtaccgggtccatgacgagggtgtgtgggccttgcaggcc
aacgaggctttcacacacatctactccggcggccgggaccgcaagatctactgcactgac
ctgcgcaaccctgatatacgcgtgctgatctgtgaggagaaagcccctgttctcagaatg
gagctggacaggtcagcagacccctctcctgccatttgggtgtcgactactaaatcctgt
gtgaacaaatggtctctaaagggaatgcataacttcagagcgtccggtgattacgataac
gactgcagcgcccctctgacgccgctctgcactcagcctgaacacgccattaaaggtggc
gccagcataattcagtgtcacatcctcaatgacaagaggcacatccttaccaaagacacc
aacaacaacgtggcatactgggatgttcttaaagcatgtaaaggggaagacctcggcaaa
gtggaatttgacgaggagataaagaagcgcttcaagatggtctacgttccaaactggttc
tctgtagacctgaaaacagggatgctgaccatcactttagatgagagtgattgctttgct
gcctgggtgtctgccaaagatgctggtttcacaagcccagacggctcagacccaaaacta
aatctaggtggtctgctgctgcaggctttgctggaggtctggcctcgaacacatatcaac
cccatggaggaagaagagggagaggttaaccatgtaaatggggagcaggagagcaggctt
cagaagggcaatggctatttccaggtgcctccacacacgccggtgatcttcggggaggca
gggggacggacattgttcaggttattgtgtcgagactctggaggagaaacggagtcaatg
ttgctgaatgaaaccgtgccacagtgggttattgatattactgtagataaaaacatgccc
aaattcaacaagatcccgttctatctccagcctcactcgtcctctggggcaaaaacactc
aagaaggaccgcctgtccgccagcgacatgctgcaggtgaggaaggtgatggagcatgtc
tacgagaagatcatcaacctggacaccgagtcacagacgaccagctcctccaccaacgag
aaacctggagagcaggagaaggaggaggacgtggctatgctggctgaggagaagatcgag
ctcttgtgccaggaccaggttttggatcccaacatggatctgaggacagtgaagcatttt
atctggaaaagtggtggagacctgacccttcactacaggcagaagtccacgtga

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