Astyanax mexicanus (Mexican tetra): 103039116
Help
Entry
103039116 CDS
T05042
Symbol
mcoln1a
Name
(RefSeq) mucolipin-1a
KO
K04992
mucolipin 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04020
Calcium signaling pathway
amex04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
103039116 (mcoln1a)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
103039116 (mcoln1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103039116 (mcoln1a)
Ion channels [BR:
amex04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103039116 (mcoln1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCLN_ECD
PKD_channel
Ion_trans
Motif
Other DBs
NCBI-GeneID:
103039116
NCBI-ProteinID:
XP_007253182
Ensembl:
ENSAMXG00000018550
UniProt:
A0A8B9LXW8
LinkDB
All DBs
Position
21:complement(27099700..27127462)
Genome browser
AA seq
580 aa
AA seq
DB search
MAAVDKNHVIQDSYERDRLLSPVTHYGSHECNNDHGNSRLSPTMGSWVTVEQEEEALRRK
LKYFFMSPCDKFHAKGRKPFKLFLQLVKIIIVTVQLVLFGLSNQMVVTFKEENTASFKHL
FLKGYDGESDALAVYTQSDVYDSIYYAVEQYLALPETTVGRYAYVYGVGVNGSALSLCQQ
YYRRGWIDPANDTFSIDPHINTDCVGVTPLDTPSGFIGSDYKNFTLKFHKLINVTIQFQL
KAINLQTIINNEIPDCYTFTITIVLDNKAHSGKVKISLDNEVAIKECKDPSVSGHAENYA
RVTFDVAVAVVCLLSLLLCGRSIFRGVLLQHEFVQFFKDTLNRKVSWGDRMEFINGWYIL
LIISDLLTITGSFIKIGIESKNIASYDVCGILLGTSTLLVWVGVIRYLSFFQKYNILIVT
LRAAFPNVIRFCCCVAAIYLGYCFCGWIVLGPYHVKFRSLSMVSECLFSLINGDDMFVTF
SDMQESSTLVWVFSQVYLYTFISLFIYMVLSLFIALITGAYETIKHQTQEPIHITDLHAF
IAECKDTPCSGKFRGLETSPCSFFCCCDRTTTYEDVLLVN
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggttgacaaaaatcatgtcattcaggattcctacgaaagagatcggctgctg
tcccctgtgactcactatggatcccatgagtgtaacaacgatcatggcaactccaggttg
tccccgacaatgggatcctgggtgaccgtggagcaggaggaggaagcgttgcgccggaaa
ctgaaatatttcttcatgagcccctgtgacaagttccatgcaaaaggccggaaaccattc
aaactgttcctacagcttgtgaagatcattatagtcactgtacagctggtgctgtttggt
ctgagtaaccagatggttgtgacatttaaagaagagaacacagcctcctttaaacatctg
ttcctcaaaggctatgatggggaaagtgacgcgctggcagtgtacacacagagtgatgtc
tacgacagcatctactatgcagtagagcagtacctagctttgccagagaccaccgtgggc
cgctacgcgtatgtgtatggagtaggagtgaacggcagtgctctgtcgctctgccagcag
tattatagaagaggctggatagaccctgccaacgacaccttcagcatcgaccctcatatt
aatacagattgtgtgggggtcactccactcgatacaccttcaggattcataggaagtgac
tacaaaaactttaccctcaaatttcacaaactcatcaatgtgactatacagtttcagctg
aaggctataaatcttcagaccatcataaataatgagataccagactgctacacgtttacc
atcacaatagtgctggataacaaggctcacagcggcaaggtgaagatcagtctggataat
gaagttgcgatcaaggaatgcaaagaccccagtgtgtccggccatgcggagaactatgct
cgggtgacgtttgatgtggctgtagcggtggtgtgtttactgtctctgctgctgtgtggt
cgctccatctttagaggagtcctccttcagcatgagtttgtgcaattctttaaggacacc
ctgaatcgtaaagtgtcttggggagacagaatggagttcatcaatggctggtacatcctc
ctcatcatcagcgacttgctcaccatcactggctccttcattaagattggaatcgagtca
aagaacattgcatcatatgatgtgtgtgggattttgttgggaacatcaacactgctggtt
tgggtgggagtcattcgctacctcagcttcttccagaagtacaatatcctgatcgtgacg
ttgcgggcagcgttccctaacgtgatccgtttctgctgctgcgtggcagccatatacttg
ggctactgcttctgtgggtggatcgttttgggaccatatcatgtgaagttccgttctctg
tccatggtttcggagtgtttgttctctctgataaacggagatgatatgttcgtcaccttc
agtgacatgcaggagagcagcacgctggtgtgggtgttcagccaggtgtatctgtacaca
ttcatctccctgttcatctacatggtgctgtcactcttcatcgcccttattactggtgct
tatgaaaccatcaagcaccaaactcaggagcccatacacatcactgacctgcacgccttc
attgccgagtgcaaggacacgccctgctctggaaagttccgaggcttggagacgtcgccg
tgctctttcttctgctgctgcgacaggaccaccacctatgaggacgtgctgctggtgaat
tag
DBGET
integrated database retrieval system
