Astyanax mexicanus (Mexican tetra): 103039252
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Entry
103039252 CDS
T05042
Symbol
xpo1a
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03008
Ribosome biogenesis in eukaryotes
amex03013
Nucleocytoplasmic transport
amex03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103039252 (xpo1a)
03008 Ribosome biogenesis in eukaryotes
103039252 (xpo1a)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103039252 (xpo1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103039252 (xpo1a)
03009 Ribosome biogenesis [BR:
amex03009
]
103039252 (xpo1a)
03016 Transfer RNA biogenesis [BR:
amex03016
]
103039252 (xpo1a)
03036 Chromosome and associated proteins [BR:
amex03036
]
103039252 (xpo1a)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
103039252 (xpo1a)
Ribosome biogenesis [BR:
amex03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
103039252 (xpo1a)
Pre-60S particles
103039252 (xpo1a)
Transfer RNA biogenesis [BR:
amex03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
103039252 (xpo1a)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
103039252 (xpo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
BspA_v
Motif
Other DBs
NCBI-GeneID:
103039252
NCBI-ProteinID:
XP_007260671
Ensembl:
ENSAMXG00000003069
LinkDB
All DBs
Position
21:33732200..33756595
Genome browser
AA seq
1071 aa
AA seq
DB search
MPADMTMLADHTARQLLDFSQKLDINLLDNVVNSMYYDVGSQQRLAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDANVV
EKEGVYLAKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHSTLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVNLFTLTMMQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRHLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWRNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDMLNV
YKCLSENISSAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LEAVLIDYQRNVPAAREPEVLSTMATIVNKLGAHITGEIPQIFDAVFECTLNMINKDFEE
FPEHRTHFFYLLQAVNSQCFPAFLTIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISV
ALNTGTPVNNQAYMQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEEREASLRQAQEEKHKIQMSVPGILNPHELPEEMCD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagatatgacaatgttagcggaccatacagcccggcagctgctggacttcagt
cagaagttggatatcaacctacttgacaatgtggttaactccatgtattatgatgttggc
tcccagcaacgactggcacaggaagtcctcaccaacttgaaagatcatccggacgcatgg
accagagtggacaccatcctggagttttctcaaaatatgaagactaaatactacgctctt
cagattctggagaccgtcattaaaacacgttggaaaattctcccaaggaaccagtgtgaa
ggaattaagaagtatgtcgtggggctgatcatcaagacttcctcagatgccaatgttgtt
gagaaggagggagtgtacctggcaaaactaaacatgatcttggtacagatcttgaagcag
gagtggccaaagcactggcccacgtttatcagcgacatcgttggcgccagtcgtacgagc
gagagcctctgccagaacaacatgatcatcctgaagctcctcagtgaggaagtattcgat
ttctccagcggacagatgactcaggtcaaagccaagcacctgaaggacagcatgtgcaat
gaattttcacagatattccagctttgccagtttgtcatggaaaattcccagaatgcaccg
ctggtccactccacactggagacccttcttcgcttcctgaactggattccactgggttac
atttttgagaccaaactcatcagcaccctggtttataagtttctgaacgtccccatgttc
cgaaacgtgactctgaagtgtctgacggagattgcgggtgtcagtgtcaatcagtacgag
gagcagttcgtcaacctcttcaccctgacaatgatgcagctcaaacagatgctgcctctg
aatacaaatatccgcctggcctattcgaacgggaaagatgatgagcagaacttcatccag
aacctgagcctgttcctctgtaccttcctcaaagagcacggtcagctaattgaaaagagg
ctcaatctacgtgagacactcatggaggctctccactacatgctgttggtgtctgaagtt
gaggaaacagagatttttaagatctgtttggagtactggaaccacttggctgcagagctg
tacagagagagtccctttagcacttcaacctcgcccctgctttctgggagccagcatttt
gacgtgcctccacgcagacacctctacctgcctgttctatccaaggtgcgtttgctaatg
gtgagccgcatggctaagcccgaggaggtgctggttgtggagaatgaccagggagaggtg
gtgcgagagttcatgaaggatacagactcaatcaacctctacaaaaacatgagagaaaca
cttgtctacttgacccatctggactatgcagacaccgagcgaatcatgacagagaagctc
cataaccaggttaatggtactgaatggtcctggaggaacctgaacacgctgtgctgggct
atcgggtcaatcagtggggccatgcacgaggaggacgagaagaggttcctcgtcacggtt
atcaaggacctgctgggactctgtgagcagaagcgagggaaggacaacaaggccatcatc
gcctccaacatcatgtatatcgtaggccagtacccacggttcctccgcgcccactggaag
ttcctgaagacggttgtgaacaagctgtttgagttcatgcatgagacgcatgatggagtt
caagacatggcctgcgatacgttcattaagattgctcagaagtgcaggaggcattttgtt
caggtgcaggtcggagaggtgatgcccttcattgatgaaatcctcaataacatcaatacg
atcatctgtgatctgcagccacagcaggttcacacgttttacgaggcagtgggttatatg
attggcgctcagacggatcaagctgtacaagagcacctcatagagaagtacatgctgctt
cccaaccaggtgtgggacagcatcatccagcaggccaccaagaacgtggatatcctgaag
gacccagagacggtgcgtcaactcggcagcatcctgaagaccaacgtgagggcgtgtaag
gctgtaggacacccgtttgtggtgcagttaggccgcatttacctggacatgctcaacgtc
tacaagtgcttgagtgagaacatctcctctgccattcagaccaacggtgagatggtgacg
aagcagcctctgatcaggagtatgcgcacggtgaagagggagaccctgaagctcatctct
ggatgggtcagccgctccaatgatcctcaaatggttggtgagaactttgttcctcctctg
cttgaggccgtcctgatcgactatcagcgtaacgttccggctgctcgggaacctgaagtt
ctcagcactatggccaccatcgtcaataaactcggggctcacatcactggagaaatcccc
cagatctttgacgctgtctttgagtgcactctgaacatgatcaacaaggactttgaggag
ttcccagagcacaggacacacttcttctacctgctgcaggcggtcaactcgcagtgtttc
cctgctttcctgaccattcctccagctcagttcaagctggtgctggactctatcatctgg
gcctttaaacacaccatgaggaacgtggcagacacaggtctgcagatcttgtacacgttg
ctgcagaatgtggctcaggaggaggcggcagctcagagcttctatcagacgtacttctgc
gacatacttcagcatatcttctctgtcgtcactgatacgtcccacacagctggtttgacg
atgcacgcctccatcctggcctacatgttcaacctggtggaggagggaaaaatcagtgtt
gctctgaacactggcaccccggtcaacaaccaggcctacatgcaggaatatgtggccaac
cttcttaagacggccttcccacacttacaggatgcccaggtgaaggtgtttgtaacaggt
ctgttcagcttgaatcaggacatacctgccttcaaagagcacctgagggacttcctggtg
cagataaaggagtttgcgggcgaggacacaagcgacctgtttctggaggagcgcgaggcg
tcgctgcgtcaggctcaggaggagaaacacaaaatccagatgtccgtgccaggaatactc
aaccctcacgaactgcccgaggaaatgtgcgactga
DBGET
integrated database retrieval system