Astyanax mexicanus (Mexican tetra): 103039255
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Entry
103039255 CDS
T05042
Symbol
tbc1d5
Name
(RefSeq) TBC1 domain family member 5 isoform X1
KO
K18469
TBC1 domain family member 5
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103039255 (tbc1d5)
Membrane trafficking [BR:
amex04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
103039255 (tbc1d5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
RGS12_us1
DUF3573
Motif
Other DBs
NCBI-GeneID:
103039255
NCBI-ProteinID:
XP_022521028
Ensembl:
ENSAMXG00000007142
LinkDB
All DBs
Position
3:61761013..61801395
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AA seq
847 aa
AA seq
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MQHPNFETRHPLQAEEQETGYDPLHNYNRNKPRGLSDSSVESTFQSYSKEWDDLFQNSNY
LVRIRQAGINGRLRSSRFRSVCWKLYLDILPEDKSQWINKTREFRAQYEQIKETHITNPR
KAAGQQDLVVNNPLSQDEGSLWNKFFQDKELRGMIKQDVLRTFPEMRYFQEEDVRTKLTD
ILFCYARENERLLYKQGMHELLAPIVFVLHCDHQAFQHASETANPSEEMKVLLDPNFHEH
DAYAMFSQLMETAEPWFSSFEREVRKGKEEMMTSIPFARPQDAGPSVAIVTKVNRIQDQL
VKKHDIELHMHLNRLEIAPQIYGIRWVRLLFGREFPLQDLLVVWDALFADSITLDLVDYV
FVAMLLYIRDALIASNFQTCLGLLMHYPPVGDIHSLLHKALFLRDPKNNPRPVNYQFQQN
LDYYKTRGADLVNRTRASTKAPPLNINKVSSSLLSFGRKLMAPMGGGSSGISPINSEVLS
APPPQSQPPRALTEHPPGPASSQIQPQHRLLKSESMPVHLSKDVGSAGVSQISLPTQILS
DLQGQTSSRTVSSSPSTESLSGGRDHAMSSPPLPVSRGRDSNTSSPPLSATKKDSFFNIS
RSRSHSKSMGKKDVEELEAQVSFLQGQINDLEAMSKYCAKMMNVHIGKIQDVILQENLEK
EDEVLVSLAGLKQIKDILKGALRFNQSQLEAEENEEITIADNHYCSTAQHRAQQEGFTSA
DAADDADDAQSGSQLDPSLLSEQETDLETKLEKPVQSQQELTTELQTVEGRNWDDYILVS
QDGELQPNEGDEHGAPTVAPAFKHMRPFIKAEFQDPLMGATSGSSSPDEGSTNSKDSDFT
IVNPADI
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacccaaattttgagacgaggcatccgctgcaggctgaggagcaggagacgggt
tacgaccctctgcacaactacaaccgaaacaaaccacgaggactttcagacagctctgtt
gaatctactttccagtcctacagtaaagaatgggatgacttgttccagaacagtaactac
ctggtgcggatcaggcaggcaggcattaacggccgattacggagcagccgattccgcagt
gtctgctggaagctctatttagatattcttcctgaggataaaagccaatggatcaataag
accagagagttccgagctcagtatgagcagattaaagagacgcacatcacaaacccacgc
aaagctgccggtcagcaggacctcgtggtgaataaccccctgtctcaggatgaggggagt
ctgtggaacaagttcttccaggataaagagctgaggggtatgatcaagcaggatgtcctg
agaacgtttccagagatgcgttattttcaggaggaggatgttcggacgaaactgacggat
attctgttctgttacgctcgagaaaacgagagactgctctataaacagggaatgcatgag
ctgttggccccgatagtgtttgttctccactgtgatcatcaggccttccagcatgccagt
gagacggccaatcccagtgaggagatgaaggtccttctggatccgaatttccatgaacac
gatgcttatgccatgttctcccagctcatggagacagcagaaccctggttctctagtttt
gagagggaggtgcggaagggtaaagaggagatgatgaccagtataccgttcgccaggccg
caggacgccggcccttctgttgccattgtaaccaaagtaaaccgtatccaggatcagctg
gtgaagaagcatgatatcgagctgcacatgcacctcaaccgcctggagatcgccccccag
atttacggcattcgttgggtgcggctgctgttcggtagggagtttcctctgcaggatctg
ctggtggtttgggatgctctgtttgcggacagcatcactctggatctggtggactatgtg
tttgtggccatgctgctctacatcagagatgcgcttattgccagtaacttccagacgtgt
ctgggtctcctgatgcactacccacctgtcggagacatccactctcttctgcacaaagct
ctgttcctcagagatccaaagaacaacccaagaccggtgaactaccagttccagcagaac
cttgactactataaaacccgtggagccgacctggtcaacaggacccgggccagcactaaa
gctcctccactcaacatcaacaaagtctccagctctctgctcagcttcggcaggaagctc
atggctccaatgggaggcggctccagcggcatctcgccaatcaacagcgaggttctgtca
gctccgcccccgcagtctcagccgcctcgggccctgaccgagcacccgcccggcccggcc
tcctcacagatccagccgcagcaccgcctgctgaagtccgagagcatgcctgtacacctg
agcaaagatgtaggttctgctggagtatctcagatctctctgcccacccaaatactgtct
gacctgcaaggccagacctcctccaggactgtaagctcctcccccagcactgagagtctg
tctggtgggcgggaccatgcgatgtcctctcctcctcttcctgtctccagggggcgggac
tccaacacatcgtctccgcccctttccgccactaagaaagactcgttcttcaacatcagt
cgctcgcgctctcacagcaagtctatgggcaagaaggatgtggaggagctggaggcccag
gtttcgttcctgcaggggcagattaatgatctggaggcgatgagtaaatactgcgctaag
atgatgaacgttcatatcggtaaaattcaggacgtgattctgcaggagaatctggaaaag
gaggacgaggtgctggtgtccctcgctggactcaaacagattaaggacatcctgaaggga
gctctgcgctttaaccagagtcagctggaggccgaggagaacgaggagatcactatagca
gacaaccactactgctccacagcccagcacagagctcagcaggagggcttcacgtccgct
gatgctgctgatgatgctgatgatgctcagtccggctctcagctggaccccagcctcctc
tcagagcaggagacggacctggagaccaagctggagaaacctgtacagagccagcaggaa
ctcaccacagagttacagactgttgaagggaggaactgggacgactacatcctggtttcg
caggatggagaactccagccgaatgagggcgacgagcacggagctcccaccgtcgccccg
gcctttaaacacatgcggcctttcatcaaggcggagtttcaggatcctctgatgggagcc
acttccggctcgtccagtcctgacgagggcagtactaacagcaaggactctgattttacc
atcgttaaccccgctgacatatga
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