Astyanax mexicanus (Mexican tetra): 103039260
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Entry
103039260 CDS
T05042
Symbol
caskin1
Name
(RefSeq) caskin-1 isoform X1
KO
K21952
CASK-interacting protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
103039260 (caskin1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103039260 (caskin1)
Membrane trafficking [BR:
amex04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
103039260 (caskin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Caskin-Pro-rich
SAM_1
Ank_4
Caskin1-CID
Ank_5
SAM_2
Ank_3
Caskin-tail
Ank_KRIT1
SH3_2
SH3_9
SH3_1
SAM_TNK
ANK_LRRK2
SRP68
Motif
Other DBs
NCBI-GeneID:
103039260
NCBI-ProteinID:
XP_022542081
LinkDB
All DBs
Position
19:complement(13758310..13896911)
Genome browser
AA seq
1536 aa
AA seq
DB search
MMGKDQELLQAVKTEDLLTVQKLLQRPKPGKAKLLGSAKKVNVNFQDTDGFAALHHASLN
GNLELITLLLESQAMVDIRDQKGMRPLHYAAWQGKSEPMKLLLKSGSSVNGQSDEGQIPL
HLAAQHGHYDVSEMLLQHQSNPCIVDNAGKTPLDLACEFGRVGVVQLLLSSNMCAALLEP
KPGDSTDPNGTSPLHLAAKNGHIDIIRLLIQAGIDINRQTKAGTALHEAALCGKTDVVRL
LLDSGINATVRNTYSQTALDIVYQFTATQASKEIKQMLRDASAALQVRALKDYCNNYDLT
SLNIKAGDVITVLEQHSDGRWKGCIHDNRTGNDRVGYFPSSIVEVICKRPGPTGSWSTVV
STQQYQTIPLCVSGCVSPGAAVLNGESYHEIHILPPPPTPHAHQPLFTSFGYSRSQSTSA
EPLSQQGARGSESSPHGSPTPSGGPQGCSNEEIWVLRKPVAGGDRSSVGSSGSVASARSS
GSGQSAGSSSHILHAQAEGVKLLATVLSQSAKAKEHLLEQSKSLEHSSITTAKGPTSRSQ
SVSSCPLHEQPYSEAPQRKAEVLSEGKSSEAVTQWLSEFQLQVYAPNFISAGYDIPTISR
MTPEDLTAIGVTKPGHRKKMTSEINKLSVTEWTPDQKPANLGEWLTMIGLSQYHQVLVQN
GYENIEFITDITWEDLQEIGITKLGHQKKLMLAVKKLAELQKSSENRNMTRKKPQLSQDM
VAIESPPPDSGECMSPKMTTFQDSELSGELQAALTRPGNTPDGPDVRNNANGGPVPQQRS
RSLHENSINKSRDSEEPIGPPRKEARTMRQSSQAGSQRGSTSQPKPRQSYPQGSGPPYTP
PQTPTKTKPPSSQTMGSSQAKPKPSPQLLQQTERPMSPRPAPQSPTHRAQPQPSPQPTES
VEAVQPAPPVSVPLLCLPPEGDSDEGNEQGTPKKRAHSLNRYAVSDGEQEREELNVQDTG
GKYATVQHRVGRSNSMKGQADKNVNRSQSFALRQKKKGPPPPPPKRSSSAISSSSSNLTE
VPKETGTTGHLLDVNYQPQRRASDLGGTVDTGSAGSVRSIAAMLEMSSIGGGAKGLAQKS
TGHFLQVGTAGGKQHDAIGLDGEVVNRRRTISGPVTDLVAAAKREQQSQPVQVQDKPPKE
PQPNSTGTSAENLPFAEDGNLTIKQRPRQGKGEGEEVVDSMYPLPQEEIPNVDGTGTLKR
RAWSSKQHQEEAKFHLTESNTVKRRPKSRETKESEEPQQEEPLVPPYQNGTGTIKRRPTS
EVTVSEQPRPQEHVENKPRRDSTDSTDSAARKPVKPPVSPKPVLAQHLKKQIPPATVTKK
ASFPGPGAPGSPGTTQCGPFSCPVFTQLFEGKKIPPPISPKPTPPPTAPKPPKNVLQSMN
PPPGQTPIPSPGKPPVVKIDSPVLATNPAKSPTPPTPPAQSPQTPHTPQTPVTPQTPQTP
VPPPVKPPRSSISGVSMDSGSGGVGPGSGVISADAVHQKIEETSASLAAALLAVEEKIKE
DRHRDSVSENKSTVSILDDIGSMFDDLADQLDAMLE
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atgatggggaaggaccaggagctgctgcaggccgtgaagaccgaggacctgctcactgtg
cagaagctcctgcagagacccaaacccggcaaagcgaagttgcttggttctgcaaagaag
gtgaacgttaatttccaggacacagatgggtttgctgcgcttcaccatgcttccctcaat
ggaaatctggagctcatcactctgctgctggagtctcaggccatggtggacatcagggac
cagaaaggtatgcgacccctgcactatgctgcttggcagggtaaatctgaacccatgaag
ctactgctaaagtctggatcatcagtgaacggtcagtcagatgaaggccagatcccgctg
cacctggctgctcagcatggacactatgatgtgtcggagatgctgctgcagcaccagtcg
aacccctgcatcgtggataatgctggaaaaacccctctggacctggcctgcgagttcggc
cgagttggagtggtccagctgctcctcagcagtaatatgtgtgcggctcttctggagccc
aaacctggagactctactgaccccaacggaacaagtccactacacctggctgccaaaaac
ggacacatagacatcatcaggctgctgatccaggcaggcattgacatcaacagacagacg
aaggccggtactgcccttcatgaggcagcactgtgtggaaaaacggacgtggttcgcctc
ctgctggacagtggcattaatgcaacagtgaggaacacctacagtcagacagctctggac
atcgtttaccagttcaccgccacacaggccagcaaagagatcaaacagatgctgagagat
gcgtcggcagccctgcaggtcagggctctgaaggattactgcaacaactacgacctgacc
agcctcaacattaaggcaggagacgttattacagtgttggagcagcactcggatggcagg
tggaagggctgtatccatgacaaccgcacaggaaatgacagagtgggctacttcccttct
agcatagtggaggtcatctgcaaaaggccaggtccaacaggttcttggagtacagtcgtt
agtacccaacagtatcaaaccatcccgctgtgtgtgagcgggtgtgtgtcccccggtgca
gccgtgctgaatggggaatcgtatcatgagattcatatcctgccgcctccacccacgcca
catgcccatcagccacttttcacttcctttggctatagcaggtcgcaaagcacctcagcc
gagccgctcagccaacaaggtgcccgcggttcagagtccagccctcacggctccccgact
ccctctggcgggccacaggggtgcagcaatgaggagatctgggtcctgcgcaagcctgtg
gcaggtggagaccgcagtagtgtgggtagttcgggcagtgtggccagtgctcgctcctca
ggcagtgggcagagtgctgggagcagctcccacattctccacgctcaggctgagggggtg
aagcttctggcaacagtgctgtcccagtcagcaaaggctaaggagcacctgctggagcag
tccaagtccctggagcactcgtccatcaccacagctaagggtccaacctcgcggagtcaa
agtgtgtcgagctgtcctctccatgagcagccgtactcagaggctcctcagaggaaagct
gaagttttgtctgaggggaagagctcagaggccgttacccaatggctgagcgaatttcag
ctgcaggtctacgctccgaacttcatcagcgccggctatgacattcccaccattagccga
atgacccctgaggacctgactgccatcggtgtgactaaaccaggtcaccgcaaaaagatg
acctcagagatcaacaagctcagcgtgacagagtggacacctgaccaaaaacctgctaac
cttggtgagtggttgaccatgatcggactgagccagtaccatcaggtcttggtccaaaac
ggctatgaaaacattgaattcatcactgatatcacctgggaagacctgcaggagattggc
atcaccaagctgggccaccaaaagaagctgatgttggctgtgaagaagctggctgagttg
cagaaaagctctgaaaaccgaaatatgacacgcaagaaacctcagttgtctcaggacatg
gtggccatcgagagcccaccgccagacagcggagagtgcatgtctccaaagatgaccacc
ttccaggacagtgagctgagcggggaacttcaggcagccctgacccgccctggaaacacc
ccggatggtcctgacgtccgaaacaatgccaacgggggtccagttcctcagcagcgttca
cgcagtctccatgagaacagcatcaacaagagtcgagactcagaagagcccattggtcct
cccagaaaagaggcccgtaccatgcgtcagagcagccaggccggaagccagaggggaagc
acttcacagcccaaaccgagacagtcctacccacaaggcagtggtcctccttacactcca
cctcagactcccaccaaaacaaagccaccttcctctcagaccatggggtcctctcaggca
aagcctaaaccaagcccccagcttctgcagcagacggaaagaccaatgtcacctcgccct
gcgcctcagtcaccaactcacagagcgcaaccccaaccgtccccacagcctacggagagt
gtagaagcagtgcagccagcacctcctgtctccgtgccactcctgtgcctgccaccagag
ggtgacagtgatgaaggaaatgaacaaggcactccgaagaagcgagctcacagcctgaac
cgctatgctgtttccgacggcgaacaagagcgtgaagaactgaatgtgcaggacacgggc
gggaagtacgcaactgtccagcatcgggtaggtcgaagcaattccatgaaagggcaggca
gacaagaacgtgaaccgcagccagtcttttgctctcaggcagaagaagaaaggtccacca
ccacctccacccaagcgctcaagctcagctatctccagctccagcagcaacttgacagaa
gtgcccaaagaaacaggcactactgggcatctactggatgttaactaccaaccgcagaga
cgtgccagtgacctgggagggactgtggacacaggcagtgcgggcagcgtcaggagcatc
gctgccatgctggagatgtcctccattggaggaggggctaaaggtctggctcagaaatct
acaggacattttctgcaggtgggtacagcaggtgggaagcagcatgacgccattggtctg
gatggagaagttgtgaaccgacgcaggaccatcagtggtcccgtcactgatctagtggct
gcagctaagagagaacagcagtctcagcctgtgcaagtccaggataaaccaccgaaggag
cctcagccaaactctactggcacctcagctgaaaatctgccatttgctgaggatggaaac
ctcaccatcaaacagagacccagacagggcaagggtgagggtgaggaagtagtggacagc
atgtatcccctgccacaggaggaaattcctaatgtggacggcacgggcactctcaagaga
agggcctggagctccaagcaacaccaagaagaagccaagttccacctcacagagtccaac
acagtaaaacgaagacccaagagcagggagaccaaggagtctgaagagcctcagcaggaa
gaaccactggtgccgccttaccagaatggtactggcaccatcaagagacgcccaacatct
gaagtgactgtgtctgaacagccaagaccacaggagcatgtggagaacaagcctcggaga
gacagcacagacagtacggacagcgcggctcgtaaacctgtgaaacctcctgtgtcgccc
aaacctgttctggcacagcatttgaagaagcagatacctccggctaccgtaaccaagaaa
gcctcttttcctggaccaggggctcctggcagcccaggtactacccagtgtggccctttc
tcttgccctgtctttacacaattatttgaaggaaagaaaatacctcctcctatttcccca
aaaccaacacctcctcccacggctcccaaaccaccgaagaacgtccttcagtccatgaac
cctccgcctggccagacgccgataccgtctccagggaagccaccggtggtgaagatcgat
agtccagttctggctacgaacccagccaagtccccaactcctccaactcctccagcccaa
agcccccagactccacacaccccacagaccccagtgacgccccaaaccccccagacccct
gtgcctcctccagtgaagcctcctcgctcctccatcagcggggtgtctatggacagtggc
agtggcggtgtggggccagggtcaggggtcataagtgcagatgctgtccatcagaagatc
gaggagacaagtgcctcacttgctgcagctctgctggccgtggaggagaagatcaaagag
gacaggcacagagactctgtgtctgagaataagagcacagtgagcatcctggacgacatc
ggcagcatgtttgatgacctggcagaccagctagatgccatgctggagtga
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integrated database retrieval system
